Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01087213.1:2-1483[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0067 0.28 11.9 0.3 3 23 33 53 31 53 0.94

2 14 0.37 15 6.4 0.1 5 23 76 94 75 94 0.91

3 14 0.002 0.083 13.6 0.6 1 23 122 144 122 144 0.97

4 14 0.00045 0.019 15.6 0.5 1 23 181 203 181 203 0.97

5 14 5.5e-08 2.3e-06 27.9 2.7 2 23 213 234 213 234 0.97

6 14 0.017 0.69 10.7 0.3 1 23 240 262 240 262 0.96

7 14 4.8e-06 0.0002 21.8 0.5 1 23 268 291 268 291 0.97

8 14 7.8e-07 3.3e-05 24.3 2.5 1 23 299 321 299 321 0.98

9 14 0.022 0.9 10.3 0.1 2 23 328 349 328 349 0.96

10 14 0.00028 0.011 16.3 0.2 1 23 355 378 355 378 0.96

11 14 2.4e-05 0.00099 19.6 5.2 1 23 385 407 385 407 0.97

12 14 9e-05 0.0037 17.8 0.4 1 23 413 435 413 435 0.98

13 14 1.7e-05 0.0007 20.1 1.6 1 23 440 462 440 462 0.98

14 14 3.2e-05 0.0013 19.2 4.3 1 19 470 488 470 491 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0067	0.28	11.9	0.3	3	23	33	53	31	53	0.94
2	14	0.37	15	6.4	0.1	5	23	76	94	75	94	0.91
3	14	0.002	0.083	13.6	0.6	1	23	122	144	122	144	0.97
4	14	0.00045	0.019	15.6	0.5	1	23	181	203	181	203	0.97
5	14	5.5e-08	2.3e-06	27.9	2.7	2	23	213	234	213	234	0.97
6	14	0.017	0.69	10.7	0.3	1	23	240	262	240	262	0.96
7	14	4.8e-06	0.0002	21.8	0.5	1	23	268	291	268	291	0.97
8	14	7.8e-07	3.3e-05	24.3	2.5	1	23	299	321	299	321	0.98
9	14	0.022	0.9	10.3	0.1	2	23	328	349	328	349	0.96
10	14	0.00028	0.011	16.3	0.2	1	23	355	378	355	378	0.96
11	14	2.4e-05	0.00099	19.6	5.2	1	23	385	407	385	407	0.97
12	14	9e-05	0.0037	17.8	0.4	1	23	413	435	413	435	0.98
13	14	1.7e-05	0.0007	20.1	1.6	1	23	440	462	440	462	0.98
14	14	3.2e-05	0.0013	19.2	4.3	1	19	470	488	470	491	0.94

Sequence Information

Coding Sequence: ATGAGTTCGTCATACCTGCAATGTACCTCCTCCTCTTCTACTTTTACTCAGCAACATGAAGCTCTTCACGTTTCAAGTTTTAAGTCAGAACTTAATTGCGATCGTTGTATTCAAGGATTCGAAACACAATCTGACCTTGAAGATCATCAAAAAATGCATGAAGATGAAGCACCCAAATTCAGTGAACATCACATTCCAAGTTTGAAGTCAGAATTCAATTACGATCATTGTATTCAAGCATTCGAAACAGAATCTGAACTTGAAGATCATGTAAAAATGCATGAAGATGAAACGCCCAAATTAGGTGAACCCTCTTTTGAAAATACGTTCGCATTTATTCACGTTCCAAGCTTAAAGTCAGAATTTAATTGCGATCATTGTATTCAAGCATTCGAAACACAATCTGAACTTGAAGATCATGTAAAATTGCATGAAGATGAAGCGCCCAAATTCAGTGATCGTCAAATTTGCGATGACGTCAGCTACACAAAAGCCACTTCTGTTCAATCTCACAAGAGATTAAAGACTAACAAAAACCAGTTTCCGTGTCTCGTTTGCGATCAAATTTATGATAACAAAAATGATTTCAGAAAGCATCTACTAAGCCACAACATGAAGGTACATGATACGCCTGAAGAATGCAATAtttgtaaaaagaaatttagcaCCAAATCTTATCTTACTAAGCATATGAGGGTACACAACGAGGAACGCCCTTACGCTTGTAAGGTGTGTGAAAAAAAGTTTGCATGGAAGCAAACCTTAGATTTACATATGATTCAACATACTGGAGAGTATAAATTTAGGTgtgaaatttgtcaaaaaccATTCGCGCAAAAATATTACATGAAAGTCCATATGATTTCCATTCACGGTAAGGAAGATGAGAAATCGCACGAGTGCAATATTTGTAAGAAGCAATTCATAAGAAAATATGATCTTACAGTGCACATGAAGGTACATACCAAAGACCGCTCTAACGTTTGTGAGATTTGCCAGGAGACCTTCACATGGAAAGCAACATTAGATTTACACATGGTTAAACATACTGGAGAGTATAAATTTAGGTGTGAATTGTGTGAAGAACCATTTGCAACGAAACGTTCGTTTCAAGATCATTTGATTTCTATTCACGGTAAGGAAGATAAATCGCACGAGTGCAATATTTGTAAGAAAAAATTTAGTGCAAATAATCATCTTAATACACATATGAGGCTACATACTAAAGAATGCCCATACGTTTGCGAGATTTGTGAAGAAAAGTTTAGAAGGAAAGACATATTAGATAGACATATGCTTAAGCATGgcgaatataaatttaaatgtgaATTTTGTAACAAACCATTCgcgcaaaaaagttttttgcaaTATCATTTAATTTCTCATGGTAAAGCAGAGAACAAACCTCATCAATGCCATATTTGTCAGAAAAGATTCACTAGACTAGATCAACTGAAACGTCATTCGCACATGCCCCAAATA
Protein Sequence: MSSSYLQCTSSSSTFTQQHEALHVSSFKSELNCDRCIQGFETQSDLEDHQKMHEDEAPKFSEHHIPSLKSEFNYDHCIQAFETESELEDHVKMHEDETPKLGEPSFENTFAFIHVPSLKSEFNCDHCIQAFETQSELEDHVKLHEDEAPKFSDRQICDDVSYTKATSVQSHKRLKTNKNQFPCLVCDQIYDNKNDFRKHLLSHNMKVHDTPEECNICKKKFSTKSYLTKHMRVHNEERPYACKVCEKKFAWKQTLDLHMIQHTGEYKFRCEICQKPFAQKYYMKVHMISIHGKEDEKSHECNICKKQFIRKYDLTVHMKVHTKDRSNVCEICQETFTWKATLDLHMVKHTGEYKFRCELCEEPFATKRSFQDHLISIHGKEDKSHECNICKKKFSANNHLNTHMRLHTKECPYVCEICEEKFRRKDILDRHMLKHGEYKFKCEFCNKPFAQKSFLQYHLISHGKAENKPHQCHICQKRFTRLDQLKRHSHMPQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -