Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01022852.1:89-1531[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6.6 2.7e+02 2.5 0.0 13 23 5 15 1 15 0.84

2 17 0.00032 0.013 16.1 6.5 1 23 21 44 21 44 0.96

3 17 0.0007 0.029 15.0 2.3 1 23 49 71 49 71 0.98

4 17 9.7e-05 0.004 17.7 1.3 1 23 82 104 82 104 0.95

5 17 0.0002 0.0084 16.7 3.1 1 23 112 136 112 136 0.98

6 17 0.0022 0.091 13.4 4.1 1 23 141 163 141 163 0.98

7 17 0.00032 0.013 16.1 1.6 1 23 169 191 169 191 0.99

8 17 0.00084 0.035 14.7 0.1 1 23 197 219 197 219 0.97

9 17 0.00021 0.0087 16.7 6.9 1 23 226 248 226 248 0.98

10 17 0.066 2.7 8.8 0.1 1 23 254 278 254 278 0.96

11 17 1.6e-06 6.6e-05 23.3 2.6 1 23 285 307 285 307 0.97

12 17 1.7e-05 0.00073 20.0 1.5 2 23 314 335 314 335 0.98

13 17 0.00048 0.02 15.5 1.0 1 23 341 363 341 363 0.97

14 17 0.00028 0.012 16.2 0.8 1 23 369 392 369 392 0.95

15 17 0.00017 0.0069 17.0 3.3 1 23 401 423 401 423 0.95

16 17 0.00018 0.0077 16.8 5.2 1 23 429 451 429 451 0.98

17 17 0.0014 0.06 14.0 2.0 1 22 456 477 456 480 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6.6	2.7e+02	2.5	0.0	13	23	5	15	1	15	0.84
2	17	0.00032	0.013	16.1	6.5	1	23	21	44	21	44	0.96
3	17	0.0007	0.029	15.0	2.3	1	23	49	71	49	71	0.98
4	17	9.7e-05	0.004	17.7	1.3	1	23	82	104	82	104	0.95
5	17	0.0002	0.0084	16.7	3.1	1	23	112	136	112	136	0.98
6	17	0.0022	0.091	13.4	4.1	1	23	141	163	141	163	0.98
7	17	0.00032	0.013	16.1	1.6	1	23	169	191	169	191	0.99
8	17	0.00084	0.035	14.7	0.1	1	23	197	219	197	219	0.97
9	17	0.00021	0.0087	16.7	6.9	1	23	226	248	226	248	0.98
10	17	0.066	2.7	8.8	0.1	1	23	254	278	254	278	0.96
11	17	1.6e-06	6.6e-05	23.3	2.6	1	23	285	307	285	307	0.97
12	17	1.7e-05	0.00073	20.0	1.5	2	23	314	335	314	335	0.98
13	17	0.00048	0.02	15.5	1.0	1	23	341	363	341	363	0.97
14	17	0.00028	0.012	16.2	0.8	1	23	369	392	369	392	0.95
15	17	0.00017	0.0069	17.0	3.3	1	23	401	423	401	423	0.95
16	17	0.00018	0.0077	16.8	5.2	1	23	429	451	429	451	0.98
17	17	0.0014	0.06	14.0	2.0	1	22	456	477	456	480	0.90

Sequence Information

Coding Sequence: ATGTTCACGTGTCCGAGTAATTTAGCTGTTCATATGGTTGTTCATAATAAtgaaagaaatttcaaatgtgACCAGTGTGGGAAGTGTTATAAACAAAGTTGTGTTTTGAAGAGGCATATCCTGTATCAACATACATCAATAGAATTTAAGTGCGATCTCTGTCCAAAAGTGTTCAAAGAAGAATGTGTTCTGCGTAGACATAAGTTAATGCATGCTGGATCCATAAAAAAAAAGCCGCCAAGTTTTATTTGTAATTCATGCAACAAagctttttcaagaaaaaaacgtCTTCAGGTACACCAAGTTCTTcatgatccaaatttgaaagCAAATTTTAAGTGCGATTATGAGAACTGTACGAAAGCATTCTATACACAAGATTATCTTAAAACTCATAAGAAAAGCCACGAAGAACACAAATTTAAGTGCAAACTCTGTGAACAAACGTtcagaaaaaaagtttcttatGATGCTCATCATCTAACACATGCTGGAATCTACCCTTATGAATGTCAAATTTGCTTGAAAAAATATCGATTCGAGAAAAGTCTGGACATTCACATGAGGAGACATacgaaagaaaatttgtttgaatgTGATATTTGTGGTGCTACTGCTGTATATAAGGCACATTTAGTACTACATATGCTTCAACATACAGGGGCTAAGTCTGTGTTCGAATGTGAACAATGCCATATGAAGTTTAAGCAGAAAGGTCACTTTAACATGCACTTAAAAACGCACGCTGAAGGCAAGCAATATATTTGCCAGATTTGTGATGGCGTTAGCTTCAAGCTAGCTGCTTACTTGGCTGGTCACATGAAAAGGAAGCATACGGGTTACAAAATGCCGTTCAACTGTCATGTTTGCCCTAAAAGTTTTTATAGAAAAGCTCAACTCCAACAACATCTACTCAGCCACAATATTGGCACGCATGAAAAATGCAATATTTGTGAAAAGAAATTCACAGGAAAAGAATCTCTTAATTATCATATGAAGCTGCACAATAATGAATATCCTCACGTTTGTGAAAtttgtaatgaaaaattcattaaaaaacaaAGTTTGGACGAACACATGGTTAAACATACTGGAGATTACAAATTTAAGtgtgaaatttgtaaaaagccATTCTTACGGAAATATCTCTTGAATGAACATTTAATGGCATATCATGGCGAGGAAAAGGACAGGAAGCATCATGTGTGCCATATTTGCCAAAAAAGATTTATCACACCTCAACAGCTCAAACTTCATTCAGCGAAACATGCCAGCGAGCGAGAATTCAAATGTAATATGTGTAGTCGTCGCTTCTACTCTCAAAAGCTTTTGCAGACCCATAAAAAGCGTCATTTGAAGCATAAATTTAGGTGTACTAAATGTGAATAtaagttttcattcaaatctcAACTGGATTTACATGTCGAGAAGGAGTCACATTAA
Protein Sequence: MFTCPSNLAVHMVVHNNERNFKCDQCGKCYKQSCVLKRHILYQHTSIEFKCDLCPKVFKEECVLRRHKLMHAGSIKKKPPSFICNSCNKAFSRKKRLQVHQVLHDPNLKANFKCDYENCTKAFYTQDYLKTHKKSHEEHKFKCKLCEQTFRKKVSYDAHHLTHAGIYPYECQICLKKYRFEKSLDIHMRRHTKENLFECDICGATAVYKAHLVLHMLQHTGAKSVFECEQCHMKFKQKGHFNMHLKTHAEGKQYICQICDGVSFKLAAYLAGHMKRKHTGYKMPFNCHVCPKSFYRKAQLQQHLLSHNIGTHEKCNICEKKFTGKESLNYHMKLHNNEYPHVCEICNEKFIKKQSLDEHMVKHTGDYKFKCEICKKPFLRKYLLNEHLMAYHGEEKDRKHHVCHICQKRFITPQQLKLHSAKHASEREFKCNMCSRRFYSQKLLQTHKKRHLKHKFRCTKCEYKFSFKSQLDLHVEKESH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -