Mcic019904.1
Basic Information
- Insect
- Mochlonyx cinctipes
- Gene Symbol
- Zfy2
- Assembly
- GCA_001014845.1
- Location
- JXPH01017938.1:1-3129[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 9.1e-07 3.8e-05 24.1 1.1 2 23 126 147 125 147 0.97 2 15 0.0013 0.054 14.2 1.4 1 20 168 187 168 189 0.92 3 15 0.00033 0.014 16.0 0.3 3 23 200 221 199 221 0.96 4 15 0.00066 0.028 15.1 1.9 1 23 227 249 227 249 0.96 5 15 1.1e-05 0.00046 20.7 1.5 1 23 255 278 255 278 0.97 6 15 0.21 8.8 7.2 4.7 1 23 283 305 283 305 0.98 7 15 0.0002 0.0083 16.7 8.6 1 23 311 333 311 333 0.99 8 15 8.2e-07 3.4e-05 24.2 0.9 1 23 339 361 339 361 0.96 9 15 2.1e-06 8.7e-05 22.9 1.9 1 23 367 389 367 389 0.98 10 15 0.0018 0.077 13.7 2.3 1 23 395 418 395 418 0.93 11 15 0.00013 0.0054 17.3 3.1 1 23 451 473 451 473 0.98 12 15 1.5e-05 0.00061 20.3 1.2 1 23 479 502 479 502 0.94 13 15 1.4e-05 0.00058 20.3 0.4 1 23 508 530 508 530 0.99 14 15 5.1e-05 0.0021 18.6 1.9 1 23 536 558 536 558 0.97 15 15 0.067 2.8 8.8 2.9 1 23 564 586 564 586 0.98
Sequence Information
- Coding Sequence
- atttgcAAAGATGACGGTCTTCCACAAAATATTTGTGCAGATTGCATGGAACGCCTAGTGTTGGTTAACTCATTCCGCATAGAATGTGAAAAGTCGCATGAGTTTCTCGATAAATATGTACAGAGGAGCACTTTGAAAACTACTGATGAACAGCTGGAAGCTGCTAAACATGACGATTACAAGAATTTTGAATTTCTGAGTATGCAGGGAAATGAATTTCAATCTGgacgaatgattataattgaaaaagagATTATGTCAAAGAGTAATCTACAGGAAATAATCCAAAATGATAACCAAATTGAACATTTCGAAGAAACGGATAGTTTTCACGTTGAAATCGAAGAAGAGTTTCTGGAAGAACTTGGGGAGCTGGAGTGTAACATTTGTGGCAAAATGTACAAAAGAAAGCCACATTTAGATCGTCATATGGCCACGCATACAGAGCAGGACGTTACGGAGATGAAGgtcaaaaagaaatttcaaccaACGTCCCCAAACCATTATTGTTATAAATGTGGAAAAAGATTTTCTAAACTAAAATCTTTGGAAGAACATGAAATACGAGGAAAATGCGTCTCTTCTGAAAATCCAGCTTGTCGATATTGTAAAGAAACTTTCACTACAATCGAAAATCTCGAAGTTCACCTCGAGAAGTCTCATCCAAAAGATCGCCCGCACATCTGTCCAATTTGCAAAAAGTCATTTCAAAGTGTTTCTAATAGGAACACGCACGTCCAGTCCCACAATAAGGAAGGGTCGTTCACCTGTGACATTTGTAATCAAGGATTTAAGAGTAAAGTTTATCTGAACAAGCATCGCAAGTCTGTCCACACGATCGCCAGCCACACTTGTCCACATTGTCTGATGACATTCGACAATACAGTCAAATACGATTACCATTTAAAGACTCACGACCCTAATAAAAAGTATCagtgtaaattttgtgataaatccTTCATGCAGCATCACCATCTTGCTAACCACGAAAGAACTCATACTGGCGCAAGGCCGTATTTGTGTAATATTTGTGGAAAAGatTTTAAGCAGGAATCAAATTTCAAGCTGCATCTCAGAATTCATGATGGAGTTCGGCCGCACGTTTGCACAATTTGTTCGAAAGATTTCATTCAAAAATCAACACTTAATGTTCATTTAAGGACGCATACTGGAGAACGGCCATACAAGTGTAACTCATGTACCAAAGCGTTTGCACAGGCGCAGCAGCTAAAATACCACAACCATTCAGCGCACAATGGTCCANTGCCTAAAATAGAGGCCGAAGAAGAAACTGCTGGAGATGAGACAAACAGGACAGAAAACAGAATAGTCAAGGAGAAAATCTACCCGTACGTTTGCCACATTTGCAATAAAGGTTTCAAACTCCCGTGCTCATTATCTTCCCACTTAAAAGTCCACACGGAGGACAGGAAGCATATCTGCACAGAATGCGGGAATACGTTCAAGCGCGCTGAGCATTTAAGAATTCACATAAACGGCGTTCATTTGAAGCAGAAGCCATATTCTTGTGACATTTGTCTAAAATCTTTTTCCCAGGCAGGGGATCGGAATATCCATATGAGGAGGCACACCGGCGAGAGGCCGCACAGCTGTCCGCAGTGTAATAAAAGCTTCCGGCTGTTGAAAGCTATGCGTGCGCATCAGAGAATTCACACTGGGGACCGCCCATATCATTGCGAGTTTTGTAAAATGGATTTTATGACATACACTGCGCTCGCTACACACACAATGAAGCATAAAGAACACAGCCAAGTCCCCTCACAACCCCAAGACCATAATCATGGAGGAATTAAGTACGAGATTGTAGAAATAGCGCaggaaccaaaaataattagtaTCCCAAATCCGATTGTCATTGAGACTTTGCAGCAACCGGATACGATAGCAGACAAATCGAGAACGCATATTGTGCTCACGAtgccataa
- Protein Sequence
- ICKDDGLPQNICADCMERLVLVNSFRIECEKSHEFLDKYVQRSTLKTTDEQLEAAKHDDYKNFEFLSMQGNEFQSGRMIIIEKEIMSKSNLQEIIQNDNQIEHFEETDSFHVEIEEEFLEELGELECNICGKMYKRKPHLDRHMATHTEQDVTEMKVKKKFQPTSPNHYCYKCGKRFSKLKSLEEHEIRGKCVSSENPACRYCKETFTTIENLEVHLEKSHPKDRPHICPICKKSFQSVSNRNTHVQSHNKEGSFTCDICNQGFKSKVYLNKHRKSVHTIASHTCPHCLMTFDNTVKYDYHLKTHDPNKKYQCKFCDKSFMQHHHLANHERTHTGARPYLCNICGKDFKQESNFKLHLRIHDGVRPHVCTICSKDFIQKSTLNVHLRTHTGERPYKCNSCTKAFAQAQQLKYHNHSAHNGPXPKIEAEEETAGDETNRTENRIVKEKIYPYVCHICNKGFKLPCSLSSHLKVHTEDRKHICTECGNTFKRAEHLRIHINGVHLKQKPYSCDICLKSFSQAGDRNIHMRRHTGERPHSCPQCNKSFRLLKAMRAHQRIHTGDRPYHCEFCKMDFMTYTALATHTMKHKEHSQVPSQPQDHNHGGIKYEIVEIAQEPKIISIPNPIVIETLQQPDTIADKSRTHIVLTMP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -