Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01022700.1:156-1781[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.7e-05 0.0016 19.0 0.8 2 23 5 26 4 26 0.94

2 19 0.015 0.63 10.8 3.1 1 23 34 57 34 57 0.95

3 19 0.00093 0.039 14.6 3.5 2 23 63 85 62 85 0.97

4 19 0.0016 0.067 13.9 1.3 1 23 88 110 88 110 0.95

5 19 2.1e-06 8.6e-05 23.0 2.5 1 23 118 140 118 140 0.98

6 19 6.5e-05 0.0027 18.2 0.9 2 23 146 168 145 168 0.95

7 19 0.00025 0.01 16.4 4.5 2 23 174 196 173 196 0.97

8 19 0.00077 0.032 14.9 3.6 1 23 199 221 199 221 0.97

9 19 0.004 0.17 12.6 4.6 1 23 229 251 229 251 0.98

10 19 0.00028 0.012 16.2 3.2 2 23 257 278 256 278 0.97

11 19 0.0015 0.061 14.0 2.8 2 23 285 306 284 306 0.97

12 19 1.1e-05 0.00046 20.7 0.2 1 23 312 335 312 335 0.95

13 19 1.1 46 4.9 0.3 8 23 348 363 341 363 0.90

14 19 3.8e-05 0.0016 19.0 0.5 1 23 369 393 369 393 0.98

15 19 0.00014 0.0057 17.2 7.8 1 23 400 422 400 422 0.97

16 19 3.4e-06 0.00014 22.3 1.3 2 23 429 450 429 450 0.97

17 19 0.0016 0.066 13.9 0.5 1 23 456 478 456 478 0.98

18 19 1.8e-05 0.00076 20.0 0.5 1 23 484 507 484 507 0.97

19 19 0.00044 0.018 15.6 7.9 1 23 515 537 515 537 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.7e-05	0.0016	19.0	0.8	2	23	5	26	4	26	0.94
2	19	0.015	0.63	10.8	3.1	1	23	34	57	34	57	0.95
3	19	0.00093	0.039	14.6	3.5	2	23	63	85	62	85	0.97
4	19	0.0016	0.067	13.9	1.3	1	23	88	110	88	110	0.95
5	19	2.1e-06	8.6e-05	23.0	2.5	1	23	118	140	118	140	0.98
6	19	6.5e-05	0.0027	18.2	0.9	2	23	146	168	145	168	0.95
7	19	0.00025	0.01	16.4	4.5	2	23	174	196	173	196	0.97
8	19	0.00077	0.032	14.9	3.6	1	23	199	221	199	221	0.97
9	19	0.004	0.17	12.6	4.6	1	23	229	251	229	251	0.98
10	19	0.00028	0.012	16.2	3.2	2	23	257	278	256	278	0.97
11	19	0.0015	0.061	14.0	2.8	2	23	285	306	284	306	0.97
12	19	1.1e-05	0.00046	20.7	0.2	1	23	312	335	312	335	0.95
13	19	1.1	46	4.9	0.3	8	23	348	363	341	363	0.90
14	19	3.8e-05	0.0016	19.0	0.5	1	23	369	393	369	393	0.98
15	19	0.00014	0.0057	17.2	7.8	1	23	400	422	400	422	0.97
16	19	3.4e-06	0.00014	22.3	1.3	2	23	429	450	429	450	0.97
17	19	0.0016	0.066	13.9	0.5	1	23	456	478	456	478	0.98
18	19	1.8e-05	0.00076	20.0	0.5	1	23	484	507	484	507	0.97
19	19	0.00044	0.018	15.6	7.9	1	23	515	537	515	537	0.98

Sequence Information

Coding Sequence: atgccTCTTAAAAAGTGTAATATCTGCGAGAAAAAGTTCAAAGATCAGAGAACATTAGCTATTCATATGGTCGATCATACAGGAATACAGGAAAGAAATTACAAATGTGACCAATGTGAGAATAATTATAGAGACCATCGAGCCTTGAGGAAACATGTTCTCTATAAACATTCATCAGTGGAATTAAAGTGCGATTTTTGTCCAAGGGCgttcaaagaaaaaaataaagtaaaaagacaCATGTTAACATGTCATACCACATTTTCTTGCAAATCATGCAGTGCTACTTTTGATAGCAAAAATAATCTTCAGCAGCACGAAAGTCTCCACGATCccaatttaaaatcagcatttaaGTGCAATAACTGTACAAAATCATTCGTGTCACAATCTGCACTTACAAGTCATAAGAAAATGCATAAACAGTCCAAAATCAAATGTGACAAATGTGAGAAAGATTATAAAGATAAAAGTGCCTTGAGCAAACATATTCTCTATAAACATTCGTCAGTGGAATTAAAGTGCACCAAGTGTCCAAAGGtgttcaaagaaaaaaataaaataaagaggCACATGTTAACGTGTCACACTACATTTTCTTGCAAAACATGCAACGCTTCTTTTATGAGAGAACATAATCTTAAGCAACACGAAAAACTCCATGCTCCCAATTTCAAATCAGCATTTAAGTGCGATAAATGTACAAAATCATTCGTGTTACAATGCGCATTTATAAGTCATAAGAAAATGCATGAAGAGCCCAAATTAAAATGCGGAATTTGCGATAAAGAgttcaaagaaaaatttcatttcgagGCTCACCATGCAACTCACGATGAAAGTTCTTTTGATCCGTGCcaaatttgctcaaaatcaTACCGACTCAAGTGTCGGCTCACCAACCACATGAAAATTCATACCAgggaaaatttgtttatttgtgaCATTTGTGATGCTACTTTTGTAAACAAGACAGAGTTAAAAAGTCATATGATATTGCGACATATAGATGAACGCCCTTTCGAATGTACTGTATCTAATATGTCATTTAAGTTAAAATATACCCTAAAAGAACACCTCCAATTGCATTTTGATGGCAAAAAATACGTTTGCCAAATTTGTGATGACGTCAGCTTCAGACAAGCTTCTTCTTTGACCCGTCacttaaaaacaaaacataggGCTGGAATAATGAAACATAGCTGTCATGTTTGCGCAAAACATTTTGTACGTAAGGATTATCTGAAAAAGCATCTACGCAGTCATAATATTGGTGGGCGTGAAGAATGCAagatctgcaaaaaaaaaatttcaacaaaatacaACCTTACTGTGCATATGAGGATCCATAATAACGAATATCCTTACGTTTGTGAAATTTGTGAAGACAAGTTCACCAACAAATCATCATACGATGGACATATGCTTAAACATACTGGAGAGTATAAATTCAAGTGTGAAGTATGCGATAAACAGTATGCAAAAAAGTCTGACTTGCAATACCATTTAATTTCTGTTCACGGTAATGAAGAGGATAAACCACATAGCTgccatatttgcaaaaaaagatTTGTTAGACGTTCCGACAAAAAAACTCATCTTAAAACACATGTTAGAAAGCGATAA
Protein Sequence: MPLKKCNICEKKFKDQRTLAIHMVDHTGIQERNYKCDQCENNYRDHRALRKHVLYKHSSVELKCDFCPRAFKEKNKVKRHMLTCHTTFSCKSCSATFDSKNNLQQHESLHDPNLKSAFKCNNCTKSFVSQSALTSHKKMHKQSKIKCDKCEKDYKDKSALSKHILYKHSSVELKCTKCPKVFKEKNKIKRHMLTCHTTFSCKTCNASFMREHNLKQHEKLHAPNFKSAFKCDKCTKSFVLQCAFISHKKMHEEPKLKCGICDKEFKEKFHFEAHHATHDESSFDPCQICSKSYRLKCRLTNHMKIHTRENLFICDICDATFVNKTELKSHMILRHIDERPFECTVSNMSFKLKYTLKEHLQLHFDGKKYVCQICDDVSFRQASSLTRHLKTKHRAGIMKHSCHVCAKHFVRKDYLKKHLRSHNIGGREECKICKKKISTKYNLTVHMRIHNNEYPYVCEICEDKFTNKSSYDGHMLKHTGEYKFKCEVCDKQYAKKSDLQYHLISVHGNEEDKPHSCHICKKRFVRRSDKKTHLKTHVRKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -