Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01033383.1:1939-3519[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.5e-06 0.011 15.9 4.4 14 43 22 48 14 53 0.87

2 17 0.026 38 4.6 1.2 18 33 55 72 49 76 0.73

3 17 0.018 26 5.1 1.6 6 35 72 97 71 106 0.74

4 17 5e-05 0.074 13.3 4.5 12 43 108 136 100 137 0.90

5 17 0.2 2.9e+02 1.8 0.6 18 27 143 152 138 157 0.87

6 17 0.00073 1.1 9.6 7.1 3 35 161 197 159 204 0.79

7 17 0.81 1.2e+03 -0.2 1.9 6 27 196 216 192 220 0.80

8 17 0.00091 1.3 9.3 0.7 13 43 230 257 216 258 0.85

9 17 0.053 77 3.6 7.1 13 39 261 284 259 292 0.74

10 17 0.12 1.8e+02 2.4 3.4 17 40 293 313 284 315 0.79

11 17 0.00014 0.21 11.8 2.1 6 43 311 344 308 345 0.86

12 17 0.041 60 4.0 1.5 14 38 349 370 346 379 0.72

13 17 1 1.5e+03 -0.5 1.9 18 26 381 389 374 394 0.86

14 17 0.0018 2.6 8.3 5.0 5 38 401 438 397 442 0.77

15 17 0.076 1.1e+02 3.1 2.6 5 29 433 456 431 466 0.81

16 17 0.014 20 5.5 2.3 6 43 462 495 454 496 0.79

17 17 0.0007 1 9.6 4.9 12 40 498 523 489 526 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.5e-06	0.011	15.9	4.4	14	43	22	48	14	53	0.87
2	17	0.026	38	4.6	1.2	18	33	55	72	49	76	0.73
3	17	0.018	26	5.1	1.6	6	35	72	97	71	106	0.74
4	17	5e-05	0.074	13.3	4.5	12	43	108	136	100	137	0.90
5	17	0.2	2.9e+02	1.8	0.6	18	27	143	152	138	157	0.87
6	17	0.00073	1.1	9.6	7.1	3	35	161	197	159	204	0.79
7	17	0.81	1.2e+03	-0.2	1.9	6	27	196	216	192	220	0.80
8	17	0.00091	1.3	9.3	0.7	13	43	230	257	216	258	0.85
9	17	0.053	77	3.6	7.1	13	39	261	284	259	292	0.74
10	17	0.12	1.8e+02	2.4	3.4	17	40	293	313	284	315	0.79
11	17	0.00014	0.21	11.8	2.1	6	43	311	344	308	345	0.86
12	17	0.041	60	4.0	1.5	14	38	349	370	346	379	0.72
13	17	1	1.5e+03	-0.5	1.9	18	26	381	389	374	394	0.86
14	17	0.0018	2.6	8.3	5.0	5	38	401	438	397	442	0.77
15	17	0.076	1.1e+02	3.1	2.6	5	29	433	456	431	466	0.81
16	17	0.014	20	5.5	2.3	6	43	462	495	454	496	0.79
17	17	0.0007	1	9.6	4.9	12	40	498	523	489	526	0.85

Sequence Information

Coding Sequence: ATGGATGAAGATAAAGCACTCAAACTAAGTGAACGCCCTTTTGAATGTCCGATTCGTGATGAAGACAAATCGCTCGATTGCAATATTTGTAAGAAGAAGTTTAGCAACAAAAGTTGTCTTACTAATCATATGAGTGATGTACATACTAAAGAATGCCCTTACGTTTGTGAGATTTGTCAAAAAAAGTTTAGAAggaaattctcattagattcaCATATGCTTAAACATACTGGAGAGTATAAATTTAGGTGTGAATTGTGTAAAAAACCATTTGCGCAAAAACATTCCATGCAGATCCATTTAATTTCCATCCACGGTGAGGAAGACGACAAATCGCAAGAGTGCAATATTTGTGAGAAGAAATTTTGCTTCAAATCACGTCTTATTAGTCATATGAAGACGGTACATACCAAAGAATGCCCTTACGTTTGTGAGATTTgtcaaaaaaagttcaaatggaAACCAACATTTGACAGACATGTGTTCAAACATACTGGAGAGCATAAACTTAGTAAGGAAGACGAAAATTCTTACGAATGCAATATTTGTAAGAAGAAATTTAGCTGCAAGTATTATATTACTAATCATATGAGGATACATACTAAAGAATGCCCATACGTTTGCGAGATTTGTCAAGAAAAGTTTGCATGGAAACCAGCATTAGATTTACATATGCTTAAACATACTGGAGACTATAAATATAGGtgtgaattttgtaaaaaaccATTCGCGGAAAACAATACCATGCGGGCCCATTTAATTAACGTCCACGGTAAAGAAGACGATAAATCGCACGAGTGCAATATTTGTAAGAAGAAACTTTGCAGCAAATCTAAACTTACTGTTCATATGAAGGTACATACTAAAGAATGCCCTTATGTTTGTGAGATTTGTCAAGAAAAGTTCACATATAAGCGAACGTTCGAAAGACATATGTATAAACATACCGGAGAGTTTAAAATTAGATGTAAATTGTGTGGAAAACCATTCACGCAAAAACATTTATTGCAAGCCCATTTGATTTCTGTCCATGGTAAGGAAGATGACAGATCGCAAGAGTGCAATATTTGTAAGATGAAATTTAGCTTCAAATCTAAACTTACTGTTCATATGAAGGTACATACTGCAGAATGCCCCTTCGTTTGTAAGATTTGTCAAAACAAGTTCAGATGGAAACCAACATTTGACAAACATATGCTTAAACATACTGGAGAGCATAAACTTAGTAAGGAAGACGACAAATCTTACGATTGCAATATTTGTAAGAAGAAATTTAGCTGCAAATATTATATGACAAATCATATGAGGATACATACTAAAGAACGCCCTTACGTTTGTGAGATTTGTCATGAAAAGTTTGCCTGGAAACTAACATTTGATTCACATATGCTTAAACATACTGGAGAGTATAAACTTTGgtgtaaattttgtgaaaaaccaTTCGCGCATAAACATTCCATGCAGGCTCATTTGATTTCCATCCACGGTAAAGAAGACGACAAATCGCACGAGTGCAATATTTGTAAGAAGAAATTTAGCACCAAATCTTATCTTATTAATCATATGAAGGTACATAATTAA
Protein Sequence: MDEDKALKLSERPFECPIRDEDKSLDCNICKKKFSNKSCLTNHMSDVHTKECPYVCEICQKKFRRKFSLDSHMLKHTGEYKFRCELCKKPFAQKHSMQIHLISIHGEEDDKSQECNICEKKFCFKSRLISHMKTVHTKECPYVCEICQKKFKWKPTFDRHVFKHTGEHKLSKEDENSYECNICKKKFSCKYYITNHMRIHTKECPYVCEICQEKFAWKPALDLHMLKHTGDYKYRCEFCKKPFAENNTMRAHLINVHGKEDDKSHECNICKKKLCSKSKLTVHMKVHTKECPYVCEICQEKFTYKRTFERHMYKHTGEFKIRCKLCGKPFTQKHLLQAHLISVHGKEDDRSQECNICKMKFSFKSKLTVHMKVHTAECPFVCKICQNKFRWKPTFDKHMLKHTGEHKLSKEDDKSYDCNICKKKFSCKYYMTNHMRIHTKERPYVCEICHEKFAWKLTFDSHMLKHTGEYKLWCKFCEKPFAHKHSMQAHLISIHGKEDDKSHECNICKKKFSTKSYLINHMKVHN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01011408;
90% Identity: iTF_01011408;
80% Identity: iTF_01011408;