Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01044282.1:1-3429[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00017 0.24 11.6 2.5 12 43 34 62 30 63 0.85

2 17 0.13 1.8e+02 2.4 1.6 16 29 67 80 59 90 0.74

3 17 0.013 19 5.5 2.0 6 43 86 119 83 120 0.79

4 17 0.0042 6.2 7.1 3.2 13 39 123 146 114 154 0.75

5 17 0.028 41 4.5 8.4 11 43 178 206 147 207 0.88

6 17 2.4 3.5e+03 -1.7 0.0 20 36 217 234 215 238 0.85

7 17 1.7 2.4e+03 -1.2 0.7 18 28 244 254 234 265 0.80

8 17 0.00025 0.36 11.1 7.2 11 40 270 299 258 305 0.82

9 17 0.16 2.3e+02 2.1 3.0 1 28 292 318 292 329 0.81

10 17 0.0076 11 6.3 3.2 6 43 325 358 315 359 0.77

11 17 0.00053 0.78 10.0 4.2 12 40 361 386 353 392 0.84

12 17 0.47 6.9e+02 0.6 1.3 8 27 386 404 384 416 0.77

13 17 0.0012 1.7 8.9 1.1 11 43 417 445 404 446 0.79

14 17 0.00076 1.1 9.5 5.3 12 39 447 471 439 484 0.78

15 17 1.2 1.8e+03 -0.8 1.0 17 27 485 495 474 506 0.82

16 17 0.0015 2.1 8.6 1.4 11 43 508 536 500 537 0.81

17 17 0.00023 0.33 11.2 0.1 14 40 541 564 538 564 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00017	0.24	11.6	2.5	12	43	34	62	30	63	0.85
2	17	0.13	1.8e+02	2.4	1.6	16	29	67	80	59	90	0.74
3	17	0.013	19	5.5	2.0	6	43	86	119	83	120	0.79
4	17	0.0042	6.2	7.1	3.2	13	39	123	146	114	154	0.75
5	17	0.028	41	4.5	8.4	11	43	178	206	147	207	0.88
6	17	2.4	3.5e+03	-1.7	0.0	20	36	217	234	215	238	0.85
7	17	1.7	2.4e+03	-1.2	0.7	18	28	244	254	234	265	0.80
8	17	0.00025	0.36	11.1	7.2	11	40	270	299	258	305	0.82
9	17	0.16	2.3e+02	2.1	3.0	1	28	292	318	292	329	0.81
10	17	0.0076	11	6.3	3.2	6	43	325	358	315	359	0.77
11	17	0.00053	0.78	10.0	4.2	12	40	361	386	353	392	0.84
12	17	0.47	6.9e+02	0.6	1.3	8	27	386	404	384	416	0.77
13	17	0.0012	1.7	8.9	1.1	11	43	417	445	404	446	0.79
14	17	0.00076	1.1	9.5	5.3	12	39	447	471	439	484	0.78
15	17	1.2	1.8e+03	-0.8	1.0	17	27	485	495	474	506	0.82
16	17	0.0015	2.1	8.6	1.4	11	43	508	536	500	537	0.81
17	17	0.00023	0.33	11.2	0.1	14	40	541	564	538	564	0.81

Sequence Information

Coding Sequence: ATGGAAAAACTTGAAGATCGTAAGGAAATGCTTGAAGATAAAGCACCCAAACTAAGTGAACGCCCTTTAGAATGTGCGATTCGTGATGAATTTAGTAAAGAAGACGAGAAACCGCACGATTGCTATATTTGTAAGAAGAATTTTAGCAGCAGAAGTTGTCTTACTAATCATATTAGTGATGTACATACTAAAGAACGCCCTTCCGTTTGTGAGATTTgtgaaaaaaagtttagaaCGAAATTCTCATTAGAAAGACATATGCTTAAACATACTGGAGAGTATAAATTTAGGTGTGAATTGTGTAAAAAACCATTTGCGCAAAAACATTCCATGCAGATCCATTTGATTTCTGTCCATGGTAAGGAAGACGACAGATCGCAAGAGTGCAATATTTGTAAGAAGAAGTTTAGCTTCAAATCTGAACTTACTGTTCATATGAGAGTACATACTAAAGAATGCCCTTACGTTTGTGAGGTTTGTCTAGAAAAGTTCACATATAAACGAACGTTCGAAAGACATATGGTTAAACATACCGGAGAGTATAAAATTAgatgtaaattttgtaaaaaaccaTTCACGCAAAAACATTTATTGCAAGCCCATTTGATTTCTGTCCATGGTAAGGAAGACGACAGATCGCAAGAGGGCAATATTTGTAATATGAAATTTAGCTTCAAATCTGAACTTACTGATAATATGAGTGATGTACATACTAAAGAATGCCCTTACGCATGTGAGATTTGtcaagaaaaattcaaatggaaacCAACATTTGACAAACATATGCTTAAACATACTGGAGAGAATAAACATAGTAAGAAAGACGACGAATTGCACGAATGCAATATTTGTAAGAAGACATTTAGCTGCAAATCTAATTTGAGAAAGCATATGAGGATACATACTAAAGAACGCCCTTACGTTTGTGAGATTTGTCAAGAAAAGTTTGTCTGGAAACTAACATTTGATTCACATATGCTTAAACATACTGGAGAGTATAAATTTaggtgtaaattttgtgataaaccATTCGCGCATAAACATTCCATGCAGGCCCATTTGATTTCCATCCACGGTAAAGAAGACGACAAATTGTACGAGTGCAATATCTGTAAGAAGAAGCTTAGCACCAAATCTGAACTTACTTATCATATGAGGATACATACTAAAGAACGTCCTTACGTTTGTGAGATTTGTCAAGAAAAGTTTGCATGGAAACAGAGATTAGATTTACATATGCTTAAACATACTGGAGAGTATAAATTTAGgtgtaaattttgtgaaaagCCATTCGCCCAAAAACATTCCATGCAGGTCCATTTGATTTCCACCCACGGTAAAGAAGACAAATCGCACGAGTGCAATATCTGTGAGAAGAAATTTAGCACCAAATCTGAACTTAGTAATCATATGAAGGTACatactaaaaacaaaaatactaaAGAATGCCCTTACGTTTGTGAGATTTGTCAAGAAAAGTTTGCATGGAAACCAACATTAGATTTACATATGCTTAAACATACTGGAGAGTATAAATTTAGgtgtaaattttgtgaaaagCCATACGCGCTGAAACATTTAATGCAAGCCCATTTAATTTCTGTCCATGGTGAGGAAGACGACAGATCGCAAGAGTGCAAtatttgtatgaagaaatttagCTTCAAATCTGAACTTACTTATCATATGAGG
Protein Sequence: MEKLEDRKEMLEDKAPKLSERPLECAIRDEFSKEDEKPHDCYICKKNFSSRSCLTNHISDVHTKERPSVCEICEKKFRTKFSLERHMLKHTGEYKFRCELCKKPFAQKHSMQIHLISVHGKEDDRSQECNICKKKFSFKSELTVHMRVHTKECPYVCEVCLEKFTYKRTFERHMVKHTGEYKIRCKFCKKPFTQKHLLQAHLISVHGKEDDRSQEGNICNMKFSFKSELTDNMSDVHTKECPYACEICQEKFKWKPTFDKHMLKHTGENKHSKKDDELHECNICKKTFSCKSNLRKHMRIHTKERPYVCEICQEKFVWKLTFDSHMLKHTGEYKFRCKFCDKPFAHKHSMQAHLISIHGKEDDKLYECNICKKKLSTKSELTYHMRIHTKERPYVCEICQEKFAWKQRLDLHMLKHTGEYKFRCKFCEKPFAQKHSMQVHLISTHGKEDKSHECNICEKKFSTKSELSNHMKVHTKNKNTKECPYVCEICQEKFAWKPTLDLHMLKHTGEYKFRCKFCEKPYALKHLMQAHLISVHGEEDDRSQECNICMKKFSFKSELTYHMR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01011403;
90% Identity: iTF_01011403;
80% Identity: iTF_01011403;