Mcic001454.1
Basic Information
- Insect
- Mochlonyx cinctipes
- Gene Symbol
- bab1
- Assembly
- GCA_001014845.1
- Location
- JXPH01086226.1:1295-3407[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6 3.7e+03 -2.1 0.1 29 41 193 205 193 209 0.72 2 3 4e-13 9.2e-10 38.3 0.0 1 45 378 422 378 422 0.95 3 3 0.12 2.7e+02 1.5 0.6 4 20 526 541 525 541 0.91
Sequence Information
- Coding Sequence
- ATGGGAAGCAGTGAAGGGCAGACCTACTGCCTGAGATGGAACAACCACAAGTCAAACTTGGTGGAAATTTTAGATGCTCTCATCAAAATGGAGTGCTATGTAGATTGCACAATTTACGTGGATGAAAATGTACAATTCAAGGCACATCGGGTCGTTTTGGCCGCAAATTCCCcatattttcaatcaattttacaaGATGTGCCTATGGACCATTGCAGTATACTTTTCCCGGGGGTGCAAGAGTTTGAGATGCGAGCGCTGCTGGAGTACATGTACACGGGGGAGGTGAACGTGACACAGGCACAAATACCTAGAATAATGAAAATAGCTGAACAGTTAGAAGTGAAGGGGCTGTTCGATATGACAGACTTGAAGGGGCGTTTCGACAAAATGGTGGACGAACGGGAACATCAAGCAACAACATTCAACAGCACAAGCCATCCACCAAACAGTAGTACAAAAACAACACAAGCACCACAATCATCCTATCATCAATCATCACCTATAATTACAACCTCCACAAACATTTCCTCAGCACAGAGCAGCAGCTCGTCCCCACCCTACACCTACAAGTCCCCATATTCTAGTTTATATTCCCGCAGCCCAATCCATCCAGAGAGACAACGAGAAAGAGAACGAGAAGAACGCCCACCATCACAACCATGGCCAATTTCCTCGCACCTCCCCCCTCAACTACAGTCCCAGCCTCTCTCCACCTCCACCTCTGCCATGTTAAGCTCAGTCTACGAATCAGGATCCGATATGAACCCGCTCAAACGTAAGAAGCTCCACTCAATGTCTAGCATGCTCATGTCCCGCGACACCCCAATTCTACGAAACGTTTTGGCGCAACCAAATGCCGCCGACTCATCACAACAGCAACCTCTTTCCCTACAACCTGTGCCATCCCCGAACAACATGGAAGTTGATCGACAAAGCACCCATTCCAATGGAAATGATTATAAAttccaccagaaaatgatgaaaaaggaAGACCCACATTCCCCTTACACAGACAAATCATTCGAAGATGACTTGATGGAATCGCCACAAAACTACTCTGGAGACTCGAGAATTGCCTCGTACGTTCCGCAACAGCAGAAACCAGAATGGAAGCGTTACAAACAGTACACGAGGACGGACATTTTGAACGCTATTGAATGTGTCCGTAAGGGGATGAGTGCGTTGCAAGCGTCAAGAAAGTTTGGAGTGCCATCGAGAACGTTATACGACAAAGTTAAGAAGCTCGGAATTACAACCGGGCGCCCAATGAACCGATCGATTAAACGAGAATCTAGTGGATCAAGTGGGAGTCCAGCCCCATTCCCGTACGGATTAAGTGGTGCGAGCCACATGTTTGTCGGTCACCACCCCGATAATCAAATGCCATCCCAATCACAGCAGCACGAAGAGGATAACGAAATGAAACATATGATGAAAATGGAACACTCTGTTCACAATTTACCTCCAACCATTCCACATCCAGCCGCCGCCCTCTTGGACGCTTCATTCCTTCAACAAGCGCTCGAGGCTCGTGGTGGTGATATTGCTGGGCGTGAAGCTTTGCACGCGATGGCTTTTGCCGCCGCCGCACATGCTGCTGTCAATGGAATTTCAACGAGTCCCGGAACACATGGAACCGCCAGATCTCCCAGCCCAAATGTCCTCATGAAGTATATGAGGCAAGCCTCATTAAGCCCACCGGAAGAACATTTGAACAACGAAATGCATAACCACAGTAACGGTTCCAGAAATATGGAACCATCAAACGATACCGATCGTGAAACCGACGATCAAGTAGAAGACTTGTCGATGTCAAAGAAAGACGGTTCCGAAAGAGgtGTCATTATGCCAGTCCCAACAACGAAAGTGATGTCCAACGATGACTATCATCCATTAAACATCAAACGGGAACTTATAGCTGATGGCGGTACtgattcctaa
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDENVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLFDMTDLKGRFDKMVDEREHQATTFNSTSHPPNSSTKTTQAPQSSYHQSSPIITTSTNISSAQSSSSSPPYTYKSPYSSLYSRSPIHPERQREREREERPPSQPWPISSHLPPQLQSQPLSTSTSAMLSSVYESGSDMNPLKRKKLHSMSSMLMSRDTPILRNVLAQPNAADSSQQQPLSLQPVPSPNNMEVDRQSTHSNGNDYKFHQKMMKKEDPHSPYTDKSFEDDLMESPQNYSGDSRIASYVPQQQKPEWKRYKQYTRTDILNAIECVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRSIKRESSGSSGSPAPFPYGLSGASHMFVGHHPDNQMPSQSQQHEEDNEMKHMMKMEHSVHNLPPTIPHPAAALLDASFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGISTSPGTHGTARSPSPNVLMKYMRQASLSPPEEHLNNEMHNHSNGSRNMEPSNDTDRETDDQVEDLSMSKKDGSERGVIMPVPTTKVMSNDDYHPLNIKRELIADGGTDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01011347;
- 90% Identity
- iTF_01011347;
- 80% Identity
- iTF_01011347;