Basic Information

Insect: Mimas tiliae
Gene Symbol: -
Assembly: GCA_905332985.1
Location: HG995246.1:1968501-1998905[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.13 9.2 7.3 0.1 2 23 466 487 465 487 0.93

2 15 0.48 33 5.6 1.5 2 21 603 622 603 623 0.94

3 15 0.034 2.3 9.2 1.2 2 23 687 708 686 708 0.93

4 15 7 4.8e+02 1.9 0.3 1 23 719 743 719 743 0.83

5 15 0.0022 0.15 13.0 1.5 2 23 750 773 749 773 0.97

6 15 0.068 4.7 8.3 0.2 1 23 779 801 779 801 0.93

7 15 0.0033 0.23 12.4 2.9 1 23 807 829 807 829 0.98

8 15 0.21 15 6.7 0.0 2 19 840 857 839 860 0.91

9 15 0.035 2.4 9.2 0.2 1 23 939 961 939 961 0.97

10 15 0.013 0.89 10.5 3.9 1 23 968 990 968 990 0.98

11 15 0.0014 0.093 13.6 1.8 1 23 1035 1058 1035 1058 0.95

12 15 0.16 11 7.1 1.7 1 23 1065 1088 1065 1088 0.95

13 15 0.0051 0.35 11.8 0.2 2 23 1111 1133 1110 1133 0.96

14 15 0.00018 0.012 16.4 0.5 1 23 1143 1165 1143 1165 0.97

15 15 0.0046 0.32 11.9 0.5 2 23 1192 1214 1191 1214 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.13	9.2	7.3	0.1	2	23	466	487	465	487	0.93
2	15	0.48	33	5.6	1.5	2	21	603	622	603	623	0.94
3	15	0.034	2.3	9.2	1.2	2	23	687	708	686	708	0.93
4	15	7	4.8e+02	1.9	0.3	1	23	719	743	719	743	0.83
5	15	0.0022	0.15	13.0	1.5	2	23	750	773	749	773	0.97
6	15	0.068	4.7	8.3	0.2	1	23	779	801	779	801	0.93
7	15	0.0033	0.23	12.4	2.9	1	23	807	829	807	829	0.98
8	15	0.21	15	6.7	0.0	2	19	840	857	839	860	0.91
9	15	0.035	2.4	9.2	0.2	1	23	939	961	939	961	0.97
10	15	0.013	0.89	10.5	3.9	1	23	968	990	968	990	0.98
11	15	0.0014	0.093	13.6	1.8	1	23	1035	1058	1035	1058	0.95
12	15	0.16	11	7.1	1.7	1	23	1065	1088	1065	1088	0.95
13	15	0.0051	0.35	11.8	0.2	2	23	1111	1133	1110	1133	0.96
14	15	0.00018	0.012	16.4	0.5	1	23	1143	1165	1143	1165	0.97
15	15	0.0046	0.32	11.9	0.5	2	23	1192	1214	1191	1214	0.95

Sequence Information

Coding Sequence: ATGGCAACTCATCAGCCACTTGTTCTTTGCATGGACAACTCCTTAGGTGAGGAAGTGGCTCTGAGAGTTGAGCCAGAAGATGATTTTCAGTCATTTTTGGATAAAGCCAAAGGCACTCTAGGATTGGAAGTCGATATCAATCTAATAACTGGTAACCAACATGTATCTCTAACTGACAATATGCACCAATTTCTGTTAAACGCTGAACAGAAGATGCAAAATACAGAATTTGATCAAATGTTGGATACAAATCCTGATTCATTGTATGTCTTGGACGATGGCACTCAGATTAGGGCGTCACAAATTCAGTTTGACAATGATGACCCCCTTGTTGATTTTGCTGTTGGAAAAATACCTTTTGTTAAACATACAGATGGTTTAGATTCAGATGTAGAAGAGATTGATGTAGAAAAAACTGTAGATTACAATATAATAGAAAGTCCGGTCGCGAAATGGTCCAATCTTAGCTCAAGTCCAAAGAACTTTGCCAATAGTCTACCATTCAAATTGGTGTGTACAAACACCGCGGCGTTTGAAAACCAGTTTGCTAAATGTATTGAATCCAAAACGTATGCTACGTTAAACACTGTGACTAACAGAAATAAGTCGCCAAGAAGTCTTATCCGCGATAATTATACAAAATACGACGATAGTTATCAACGTAAAAATGATAACTGCAGTTACACCAGAGAAGAAGTTCTTAATATGTTCAAGGATTCTCCAGTCAATTCCTTGCCATATGAAGGTTATAGTGAAAGAAGACATGTGCGTAAAAGTGATCCTTCACGCATACATAAAAGTTTTAAACCTCTAGCAGCCGCTTTAGACGGAGTTTTAATCAGCGAAAACGGCAATCAGATCTGCTTTTTATGTGATAGGAAAGTTGACAGGGAAAAGATCTACTTATTTGACAATGAAGACCAAAAAATACACAGAAAGTCGCCCCAAAAGAAAATGGAAACGCAGTTGAAGATTATTTGCGAAAAATGTCTGAGTGATAATTTTACGCCTTGTTCGATGAAGAGCGCGAACCAATTTTTAAACTCAGACGAGTACTTGGTGATACGAAACAACCAGCAATACATATTTAAGAAGATAAGGAATATCGATTTTAAAACGAATAATCGAGTAAAAAGAAACGAGAGTATGAAAATAAACACTGACGAGTTTGTTAAGGTTGAGATAGGATCTGACGGAGAGATAGTAACGAAACCGATTGACGAAAAGTCTGATGACGTCATACCAGTAAAGGATAAAGATAGCTCGAGCGATGTGGAGATCATTGAACCGGAAACGGAAATAGATACGATCATAGACAATTTAGAAGATGCCGATGAGCAGGTGAAAGAATTTTTGGGTAAATATCAATGGGATGGTGATAACCAAAAGGAACTAAAGTGCCGATTCTGTGAGAGAATATTCTCGAATATATCAGAAGTGATAGAACATGGGGAAGTTCACAAGCAAGATGTTGATGATGAACTGGTGTTTCCTTGTCCTCTGTGTTACCCTCATTTTAAATGGCTGAAAGGTCACCTAATGGCAGCTCATGAAAAGAAAACCTCAGATAATTTGAACAATGAAACATCCACTGTTGTTGCAAAAGGTGCAGAAGGAATTCTAGGTCAAACAACAATAGAAGTGAAGTGCGAAGCTATAAAAGAAGAGAACCTGGCGAGCAGTGATGATGAGATATGGATAGTGCAGACAGCGGACGCGGATGTTGAGGAAACACACAGTCTACAGAAGTTACTCGATGCTGCTAAGGTCGTGGAGAATCAGGAAGATGAAACTAAGAAATCTCCGAAATGTCTCAATTGCAGTCAAGTATTTCAATCATTGGAATCATTAGCGACGCACCGGTGTCGCCGACGTGGCAGGAAACGGAAACCAGTCGGAAACGATCCTACAACTATATGCGTGCCCACTCACGAGGATTTTATTAAGAGAGCTCAAGGAAGACCAAGGCACACAGACGGAAGTGGTGACAACAGTATGGTTGTGCCGAGGATTCGTAAGAAGAAGACGAAGGAGCCATCATCAGACCCTCAGATTGTGACCTGTGACAATTGTAACGAGTCGTTCACGTCTAAAGTTAGACTTAAATTTCACATTCAGTTCCACGAGCCTACTGCAATGCTGTGTGAAGGTAGGTACAGATGCGCGGAGTGCGCAGGCGCAGTGTTCAGCACGGAGACGGCGCTGTTCGACCACGTGCACTTCCAGCACGACAAGCTCAAGCGCTGGCAGTGCCCCGTGCGCGGCTGCGAGAAGACCTTCCATCTGCGCGCCACGTTAACTAAGCACAGTCGCACGCACACCGACACGCGGCGTTACGTGTGTGTCACGTGCGGGAAGCGGTTTCTCGACAAGCAGACCTTGGACGAGCATGGCGTGACACATATGCAGATAAAGCCGTTCCAGTGCCACATCTGCCTGAAGCAGCTGACGCGTCGCTCCCGCCTGCGGATGCACGTCCGAGCTCATGAGGAGGAGCTCACTCCTCGCCGGGTGCTGGTCTGCGCGGTCTGTTCCAGGGCCTTCCGTGATGCTGAACACGCGCAGGAGCATGCGTCGAATTCCTCCGAATGCATAGAGGCGTTTGCCAAAGACCTGAAGGTGGAAGAGGAGGAACCGACTGTCCAGCTCTCACCCACCAGTGGCATTGTCAGACACACAGTGCAGATTTTAGAATCTCCAAAACTATCAAAGCCGATACCGCGGCAAGTGAACAGTCCAGTTGCTCAACCATTACTGGCGCAAGTAAACGATGAAGCCAAGTCTATAATACGAGTTGTGGAAATTGAGAAGGCGTTTAGATGTGAATATTGTGAAGACGTGTTTTATTTAGAAGACAGTTTGAATTCCCACCGCGCGATACACAAGGGCGTGAGGAATCCCTTCACCTGCCACATATGCAAAGTCAGCTTCGCTACATATTCCAGAGTGACGACACATAAAACAACGCACGGCTTCTTCAAGCGTTCGCTCGCGTCGGCTCGCCAACAAGCCGGCCAGCAAGTTGGCGAGCAAACAAGCCAACAAGTTGGCCCCGCCGCCACCGGCATCCTCGGCTACGGTGACTTCCCAGTAGTGAAGCATTTCTTGTGTGAGGACTGTGGCAGGTCATATCTCCACTGGACATATTTACAAGTGCACAGACGTATGAAGCACGCTAATGAAAATTACACGTACGCGTGCAATCAGTGTGAGATGACATTCCCAAACAGTTGCAGCGTCGGGTATCACCGTAAGAAAGTCCACGGGAGAAATGCACCTGATGACCCTCCAGCGGTGACTTCTAAAGAGCCTAAACCAAATTACAGAATACCATGTCGAGACTGCGATGAAGTTCTTCCAAGTAAGACAGCATTATACAAGCACAGGAAGAAGGAACACAGCAACATCTCTTGTAGACCGGGTATATTCTGCTGCGGCACATGCGGCAAGCAGTACAGTACTCGCGCTGGTTTGGAAGCGCACGCGCTCACACACGCTGACAATATTCAATATGGTGATAAACACATGGATGGCAAACAGATCAGGTGGTCAAGTCGTGGGGTACGTGCGTGGTCATGTTCTAAATGTATCGAGCGTTTTAAATCACGCGCAGATCTGCGGACACATCTGCGGGAAGTACACGCCGAAAATCTCGCCGTTATAGAGATAGAAGGTTTGAATCCAACGTCGGAGGACGTCATGAGGGTGCTGTCGACTCACAACATATCGCAGGACAGCGTCGTTGATATCAACAAAATATCATTCTCTAAGGAACTGTCGGATTTGAACATGCAACTTCTGCTACGTGACGATGTGTTGACAGATGGTAACGAGATGGTTCAACTGCAGTTAAACGATTCTATGTTGCTTGAATAG
Protein Sequence: MATHQPLVLCMDNSLGEEVALRVEPEDDFQSFLDKAKGTLGLEVDINLITGNQHVSLTDNMHQFLLNAEQKMQNTEFDQMLDTNPDSLYVLDDGTQIRASQIQFDNDDPLVDFAVGKIPFVKHTDGLDSDVEEIDVEKTVDYNIIESPVAKWSNLSSSPKNFANSLPFKLVCTNTAAFENQFAKCIESKTYATLNTVTNRNKSPRSLIRDNYTKYDDSYQRKNDNCSYTREEVLNMFKDSPVNSLPYEGYSERRHVRKSDPSRIHKSFKPLAAALDGVLISENGNQICFLCDRKVDREKIYLFDNEDQKIHRKSPQKKMETQLKIICEKCLSDNFTPCSMKSANQFLNSDEYLVIRNNQQYIFKKIRNIDFKTNNRVKRNESMKINTDEFVKVEIGSDGEIVTKPIDEKSDDVIPVKDKDSSSDVEIIEPETEIDTIIDNLEDADEQVKEFLGKYQWDGDNQKELKCRFCERIFSNISEVIEHGEVHKQDVDDELVFPCPLCYPHFKWLKGHLMAAHEKKTSDNLNNETSTVVAKGAEGILGQTTIEVKCEAIKEENLASSDDEIWIVQTADADVEETHSLQKLLDAAKVVENQEDETKKSPKCLNCSQVFQSLESLATHRCRRRGRKRKPVGNDPTTICVPTHEDFIKRAQGRPRHTDGSGDNSMVVPRIRKKKTKEPSSDPQIVTCDNCNESFTSKVRLKFHIQFHEPTAMLCEGRYRCAECAGAVFSTETALFDHVHFQHDKLKRWQCPVRGCEKTFHLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHMQIKPFQCHICLKQLTRRSRLRMHVRAHEEELTPRRVLVCAVCSRAFRDAEHAQEHASNSSECIEAFAKDLKVEEEEPTVQLSPTSGIVRHTVQILESPKLSKPIPRQVNSPVAQPLLAQVNDEAKSIIRVVEIEKAFRCEYCEDVFYLEDSLNSHRAIHKGVRNPFTCHICKVSFATYSRVTTHKTTHGFFKRSLASARQQAGQQVGEQTSQQVGPAATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENYTYACNQCEMTFPNSCSVGYHRKKVHGRNAPDDPPAVTSKEPKPNYRIPCRDCDEVLPSKTALYKHRKKEHSNISCRPGIFCCGTCGKQYSTRAGLEAHALTHADNIQYGDKHMDGKQIRWSSRGVRAWSCSKCIERFKSRADLRTHLREVHAENLAVIEIEGLNPTSEDVMRVLSTHNISQDSVVDINKISFSKELSDLNMQLLLRDDVLTDGNEMVQLQLNDSMLLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00858956;
90% Identity: -
80% Identity: -