Basic Information

Insect: Mimas tiliae
Gene Symbol: -
Assembly: GCA_905332985.1
Location: HG995264.1:2892048-2894670[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 7.5e-06 0.00052 20.7 0.3 1 23 264 286 264 286 0.99

2 11 3.9e-05 0.0027 18.5 1.2 1 23 360 383 360 383 0.97

3 11 0.00031 0.022 15.6 1.3 1 23 387 409 387 409 0.98

4 11 0.0021 0.15 13.0 0.5 2 23 431 453 430 453 0.93

5 11 0.23 16 6.6 6.0 1 23 457 480 457 480 0.97

6 11 0.017 1.2 10.1 0.2 2 23 503 525 502 525 0.93

7 11 7.1e-05 0.0049 17.6 2.7 2 23 536 557 535 558 0.95

8 11 0.0028 0.19 12.6 1.5 2 23 574 595 573 595 0.96

9 11 0.0049 0.34 11.9 0.3 1 23 601 623 601 623 0.96

10 11 7.4 5.1e+02 1.9 6.0 1 20 629 648 629 653 0.89

11 11 0.012 0.8 10.7 0.0 2 23 704 725 703 725 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	7.5e-06	0.00052	20.7	0.3	1	23	264	286	264	286	0.99
2	11	3.9e-05	0.0027	18.5	1.2	1	23	360	383	360	383	0.97
3	11	0.00031	0.022	15.6	1.3	1	23	387	409	387	409	0.98
4	11	0.0021	0.15	13.0	0.5	2	23	431	453	430	453	0.93
5	11	0.23	16	6.6	6.0	1	23	457	480	457	480	0.97
6	11	0.017	1.2	10.1	0.2	2	23	503	525	502	525	0.93
7	11	7.1e-05	0.0049	17.6	2.7	2	23	536	557	535	558	0.95
8	11	0.0028	0.19	12.6	1.5	2	23	574	595	573	595	0.96
9	11	0.0049	0.34	11.9	0.3	1	23	601	623	601	623	0.96
10	11	7.4	5.1e+02	1.9	6.0	1	20	629	648	629	653	0.89
11	11	0.012	0.8	10.7	0.0	2	23	704	725	703	725	0.97

Sequence Information

Coding Sequence: ATGTCCACCGAAAATATCACAATGGAACTGAACGAATGCACATCAGAAATAACAATAAAAGAAGAATTTGATGACGAAAACATAAAATCAGAAATAGAACCGCATGAGGATGAAGAAAACGGAACAACTGACAATCCATTCCAAAATATACAACTTCAAATCAAAGAAGAAATTAGCATTGAGAAAGATGTAGATATACCAGGACAAACAATACAGAGTCCGACACCTGACGTTGGCAGTAGAGTTGATCGTTTGTCTGAGGATGTGGATATAAAACAGGAAGATAATGAGATAATAACTAGCGATGAGGTGATATCGTATGATTATCCAAATTTCGATGATAGTATGGATAGTAATGAAGCGGTAGCATTGAGCAAAGTGGAGGCTTGCTTGCAAGATGATGGGATTGTAAGGAACGAAGCGCATGAGAATGTCGACGACAGCCACAACATCTACAAGGTCATCAAAAACGAATCGGATCTCACAGTTACGGAAACACATCTAATATCAAACAAACTGATAAACACAACATCTACTATAACCAACCCCCGGGACGGCCTCATAGAGTCTCAAACTACCAAGACGTTGGTAATGGAGATACGGCCTATGACACAAACTAATATACCTTTAAAACTAGGGAATCCTGAAGAAATTTTACCAACCAGCGATAATTTTATTGACTACGACGCCTTCCAACTAAATTCGATCACCGGAAATGTTTTGTCTCTAGAACAGCAAGCTTACGGTCTATTGCAGAAGAAATCCAAAAAACGTCAAAAGGTTAAGAAATACACGTGTGCGAAATGCCCTAACGCGTACATCACTAATTCACAACTACAAAGACATCTGCGAGTACATGATACTATCGAGAAACGAGCGTTGGGGATCCTCAAAGGTGTTAAGACAAGGACGGAAAATCGTAATAAGAAACTCAAGTTAGAAGAGGAAGATAAAGAAGATGACCAACCGCTTGTGAAAAGGGAGGGTTATGAGTGTACTTGTGGTAATGTGTTTCGACGAAGAAGTCGAATGGAGACGTGTTTAAGATCACACAATTTGTTCGATGATACCAACACTTACCCATGCATGACATGCACAAAACAATTTAAAAGTAAAGAAGAACTAGCACAGCACAGAAGGAGGGTACATAGAAAACGGTTTCCTTGTAAATTTTGTCCCACCGACTACAATACCAGGAAAGAATTGTTCAAACATTTACAAATACACCAGAAAGTTCAGTTAATGGAGTACAAAGTGATATCAGAGGTTGTGAAAAGTAAACAAAAATTAAAATGTTTTATGTGTTCCAAATCATATAATGAATTGTCAGATTTGAAATCGCATGTCATGGATGATCATAAGGAACCGTATAGTTGTCGACATTGTAAACGAACTTTTCCGAAAATCATCGATTTTGGGCATCACACCAAGACTTACCATCCAGAGGTGGAATGTCAGTCCGTGCTAGATGTTTTGGAAGCGTTCTCGAAACTAGTTCAAGCATGGAAATGCGAGGAATGCGGTCTACAGTTCCACGAAGCGGACAAACTCGCGCTACATCAAATAGAAAAACACAGTCCGGAGTTGAAAGCTGATCCGCAATTACAATGTGAAGATTGTCGAAGAGTTTTCTTCACCCAAAAAGGTCTTACATCCCACCGAAGAATCCATCACTGCACGGAAACTGTTGAGGAAACACCACCCGAAGAAATAGGTGTCATGTGTTTAGAATGTCGTAAAATGTGCAAAGACATTAACGCGTTGACATCACACATGCGACTACATTCACCAGATAGAAAATATCCGTGCAAATTCTGCGATTTTCGATTCGCAACACCAGAAAAACGAAAAGCGCACGCCGAAATTCATACCGGTGTTATGAAATTCGTGTGCTTTATATGTGAGTACCAGTGTAGTTCCGAAAATAGGCTCAAGCATCACAAATTCTCAACCAAGCATCTTGATATGAAGGAATTTTTGTTATCTGGGGCGAAAGCACCGGAGGAGCAGTCGACGTCGAAAACAGAGCCGAAAAAGGAAGAAAAGGCTGTTAAAAAGAGAAAAAGGGAGAGGGATAGGAGTGGGAGTGAGCCAAAAGAGCCCCAAATTCCCTGTGATATATGTGGTGACATGTTCCCTTCGGAGAGCGAAATGCTCGAGCATAAACAAACGCACCCATTCATAGAGTTCCCGAACGACGACAAGCCCAGTAGGATATTCTTCAAGTGA
Protein Sequence: MSTENITMELNECTSEITIKEEFDDENIKSEIEPHEDEENGTTDNPFQNIQLQIKEEISIEKDVDIPGQTIQSPTPDVGSRVDRLSEDVDIKQEDNEIITSDEVISYDYPNFDDSMDSNEAVALSKVEACLQDDGIVRNEAHENVDDSHNIYKVIKNESDLTVTETHLISNKLINTTSTITNPRDGLIESQTTKTLVMEIRPMTQTNIPLKLGNPEEILPTSDNFIDYDAFQLNSITGNVLSLEQQAYGLLQKKSKKRQKVKKYTCAKCPNAYITNSQLQRHLRVHDTIEKRALGILKGVKTRTENRNKKLKLEEEDKEDDQPLVKREGYECTCGNVFRRRSRMETCLRSHNLFDDTNTYPCMTCTKQFKSKEELAQHRRRVHRKRFPCKFCPTDYNTRKELFKHLQIHQKVQLMEYKVISEVVKSKQKLKCFMCSKSYNELSDLKSHVMDDHKEPYSCRHCKRTFPKIIDFGHHTKTYHPEVECQSVLDVLEAFSKLVQAWKCEECGLQFHEADKLALHQIEKHSPELKADPQLQCEDCRRVFFTQKGLTSHRRIHHCTETVEETPPEEIGVMCLECRKMCKDINALTSHMRLHSPDRKYPCKFCDFRFATPEKRKAHAEIHTGVMKFVCFICEYQCSSENRLKHHKFSTKHLDMKEFLLSGAKAPEEQSTSKTEPKKEEKAVKKRKRERDRSGSEPKEPQIPCDICGDMFPSESEMLEHKQTHPFIEFPNDDKPSRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00341634;
90% Identity: iTF_00063902;
80% Identity: -