Basic Information

Insect: Mimas tiliae
Gene Symbol: -
Assembly: GCA_905332985.1
Location: HG995266.1:3135977-3170961[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.1 73 4.5 0.4 1 23 208 230 208 230 0.97

2 17 0.02 1.4 9.9 7.2 1 23 271 293 271 293 0.98

3 17 3.5 2.4e+02 2.9 0.8 1 10 326 335 326 349 0.88

4 17 2.2e-06 0.00015 22.4 0.7 1 23 383 406 383 406 0.98

5 17 0.00036 0.025 15.4 7.4 2 23 416 437 416 437 0.97

6 17 0.00014 0.0094 16.8 0.1 1 23 448 471 448 471 0.96

7 17 0.0059 0.41 11.6 0.5 1 23 476 499 476 499 0.95

8 17 1.7 1.2e+02 3.9 0.1 3 11 513 521 512 524 0.93

9 17 0.0039 0.27 12.2 3.2 1 23 788 810 788 810 0.98

10 17 3.1 2.1e+02 3.1 0.6 1 19 817 835 817 839 0.91

11 17 0.013 0.87 10.6 0.1 2 23 859 881 859 881 0.92

12 17 3.3 2.3e+02 2.9 3.9 1 19 888 906 888 911 0.79

13 17 0.09 6.2 7.9 2.8 3 23 920 940 919 940 0.98

14 17 0.00045 0.031 15.1 0.4 1 23 966 989 966 989 0.95

15 17 3.2e-05 0.0022 18.7 3.8 1 23 994 1017 994 1017 0.97

16 17 0.00014 0.0098 16.7 0.5 3 20 1029 1046 1028 1049 0.94

17 17 0.024 1.7 9.7 0.4 2 23 1056 1078 1055 1078 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.1	73	4.5	0.4	1	23	208	230	208	230	0.97
2	17	0.02	1.4	9.9	7.2	1	23	271	293	271	293	0.98
3	17	3.5	2.4e+02	2.9	0.8	1	10	326	335	326	349	0.88
4	17	2.2e-06	0.00015	22.4	0.7	1	23	383	406	383	406	0.98
5	17	0.00036	0.025	15.4	7.4	2	23	416	437	416	437	0.97
6	17	0.00014	0.0094	16.8	0.1	1	23	448	471	448	471	0.96
7	17	0.0059	0.41	11.6	0.5	1	23	476	499	476	499	0.95
8	17	1.7	1.2e+02	3.9	0.1	3	11	513	521	512	524	0.93
9	17	0.0039	0.27	12.2	3.2	1	23	788	810	788	810	0.98
10	17	3.1	2.1e+02	3.1	0.6	1	19	817	835	817	839	0.91
11	17	0.013	0.87	10.6	0.1	2	23	859	881	859	881	0.92
12	17	3.3	2.3e+02	2.9	3.9	1	19	888	906	888	911	0.79
13	17	0.09	6.2	7.9	2.8	3	23	920	940	919	940	0.98
14	17	0.00045	0.031	15.1	0.4	1	23	966	989	966	989	0.95
15	17	3.2e-05	0.0022	18.7	3.8	1	23	994	1017	994	1017	0.97
16	17	0.00014	0.0098	16.7	0.5	3	20	1029	1046	1028	1049	0.94
17	17	0.024	1.7	9.7	0.4	2	23	1056	1078	1055	1078	0.94

Sequence Information

Coding Sequence: ATGGTTGTTAATCAGTCGTCGCCGGAACTTCGAAGTTGGATTTACAATAAATCGCTGATGCAACAACTCTGTGCTTGCTCATTTGAAACTGTGACAATATCAATCAACCCGGAAGACTTGAAGCCTGTAATAGATAATAGTATATATATACCTGAAACTGTGGTACAAGATTTAAATGTGGACATCAAAGAAGAATACCTTTCTGATGAGAGTACAAAATCAGCTTTCGAAGATGTCAACATGATGGAGGAAGGTCAGATTCATCTGGAGCCTAATTTCAAGAGACTACTGGACGTCGACCACAACTACGCCTTAACCGATCCGATATTAAAACAACAATCACTTTTAAACATGTCCGTATCACCCAAAAAAACTATAAAAACTGTACGAGTAATTCAACTGGAGCTTGAAAATAAGCCAAGCACTTCAAAACCCGTTGAGAAGCATGACCACCATACCATCAGGTCAGGGAACTGTGCAGTTCCAAATATTAACGTACAACCTACCACATCCAGTAGTGTAATGAGGTCACCGAAACAAAGAAGGACCGCTCGAACCCAAATATTGATGCGAAACAAAAATCCGCGCGCGGGAAATGTGAGAAAAAATACAAAACCCATATTCCAATGTAGGCTTTGTTATGCCAAATTTGAAATCGAGTCAGCATATGATAATCATTTGAAGGAACACGAGAAGGTGAGTCTTACAAAGAGTGACTTATGCGGTAAGATCCGAATGGTATACCTCAATAGGGAAGAGATGGAGAGAGAAAGAGAGAAGAGGAGACTGATGGGGTACATGAAATTGGATCACAAATGCGAAGATTGTATTACTAGCTTCCATCATGAGGATTCTCTGAAGAATCATATGAAAAAACATGACACTAGTAAAAGCAAACATGTGTGTGAAATTTGTAAGTGTGTATATTTGACGGAAAAGGGACTGAAATTCCACTCAGTCTCACATTGGAGGAGGTTTCAATGCATGGAGTGTGGGGAGAAATTTTTACAGGACATACTTTGTATCGCACATTATAATAAGGAACACGGCAAAGATGGAAAACGAATTGATGATTACTACTCCTGTTATTATATGGACTGCGATTACATTGCTAAAAGCATCCATGAGAAAATCCGTAATCGTATTTATAAATGTAATGAATGCGATAAACAATATAATAATAATAGTGGTTTAATACTACATATTCGGTCGCGTCATCAGAACAATCTGGAAGAGGAAATAGCGTACTGTAAAGATTGTGACAAGCACTTCAGGGTCAAACATCATCTGGATGTACATTTGAGGACCCACTCGAGGCATGTCCGTGATGATATGAAGAAGTACATCTGTGATATTTGCGGCGAAAAGTTCGTGAACAAACAGGCAGTAAGAAGTCACATAGAAATGAAACATTTGGGGGTGACATTTGAGTGCGGCATGTGTAATAAGATTCTAACAAGTACAAGAGCTCTAATGAAACACGAGAGGGACAAACACAGCGGCGCGCCTCGCCCGTCGCCGCCGGACCCGAAACTGTGCCAAATATGCGGCAAGGGATTCAAGATTAACATTGCAATGGCCCTTGTGTGCCATTATTGTCATGGCGTAATGAAAAAGATTGATGATTTCAAAAAGCAAGTGGAACAAAGTATTTTACTGAGCAAAGTGCCGTACGCTTCCAAAGCGATCGGAAAACTGCAAAGAAAGAAACAAAAAATAATATCAATAAACCCAAATGAATTAATATACACGGAGAATATTCAAAATGTTAGAATAGAGGGAAAAAAATATGGTACTAAAGAACCAATCATTAAGTCGATAAAACAAGAAGTCGATTCTAAAATCGATATTGAATTAAGTGAAGAGTTGATTGATACAAAATATAATGTGTTATGTGATACATTAATGACGAGGAATAATGTCTTAAGTGGAGACACTAATGATGTTTCTAGGCATAATTTTGTAGAATTAAAGAATAGTGGCTCTAGGTGTGATGCTAGTAGATCAAAAAATAATCTAAGTGCTACTGCAAAAATTACTGAAATTTTAATAAATCCAAAACATAATGAAGCTCTGAATGAATCAAGAGGAGATTTTGAGATCGAAGTACCGGCGTGGAATATAAACACTGACAGTAGCCATGAGGGGGACCATAAAGTGCTTGATGGTGATAGGCCCAATGAAGATGACACAATTGTGCATGACTTGCCTATCTGCCAGTCTGTCCCACTTCAAGTAAATACAAAACCAACTCCGATTGATAAATTCAACGGTAAAATAGCAATAGTGTTCCAAACTCTAGAAGAATTGCAGTTAGAGAGAGAGGCTAAAGCTAGAGATGCCAAATATATGAAACTAAAGCATAAATGTGAGATGTGCTTGGTCAGTTACGACCATGAAGATACACTTGAGAATCATATGAAGAAACATAATAAGAACATTGGCGACTATATTTGCATCGTGTGCCATTGCGTGTATGCCACAGAAGCTGCTTTGAAAACACACGGCGAGTGTCATTTTAAAAGTAATCATAATGAGCACATGAAGCACAGACGGAGTCATCGCAAGAGACCTGAATGCGGCCAGTGTGGGAAGTTAATTTCGAACATAGCCAACTTAAAAAGGCATATTGAAGCCATGCACACTAAAACAAACCGCGTGTACAAATGTAAGGTATGCGACAAAGAGTATCTTTCTCAGGCGGGATTCCATTTACATTGTAAATCTGAGCACACTGACTACAACAATCCAGCTTTCTGTACGATATGCAAGCGGCAGTACAAGAATCGAAACATATTGAATAGTCATCTGAAACGACATTCCACGCATGTCGCCGACGATCAGCTGCGGTGGGTAGAATTGAACGATTCGATCACTTCACCATACGGGCGTAGTTATATCTGCGGTGATTGTGGACAAAAGTTCGCGGGCAAATTTCAAATGAGGAAGCACATTGAATATCAACATTTGAAGATAAAACACCAATGCAAGGAATGTAATCAGACGTTCAATTTCGAGAAAACTTTAAAGGCACACATGAGAGTGAAACATTCAAGTGTGCCGAAAGCAATAGATAATATATTGTGCCAGTACTGCGGGAAAGGATTTAAGCAAGCTAAAAGTTTGCAAAGTCACATTTGGTCACACACGGGAGAGAGGCCGCTTCAATGCTCGAGATGTCCAGCTAACTTCGCTCACAGTGCAGCTTTGTACAATCACAATAGACTTGTGCATAAAGTACCTAAACTTAATAAACAAGAAAAATAA
Protein Sequence: MVVNQSSPELRSWIYNKSLMQQLCACSFETVTISINPEDLKPVIDNSIYIPETVVQDLNVDIKEEYLSDESTKSAFEDVNMMEEGQIHLEPNFKRLLDVDHNYALTDPILKQQSLLNMSVSPKKTIKTVRVIQLELENKPSTSKPVEKHDHHTIRSGNCAVPNINVQPTTSSSVMRSPKQRRTARTQILMRNKNPRAGNVRKNTKPIFQCRLCYAKFEIESAYDNHLKEHEKVSLTKSDLCGKIRMVYLNREEMEREREKRRLMGYMKLDHKCEDCITSFHHEDSLKNHMKKHDTSKSKHVCEICKCVYLTEKGLKFHSVSHWRRFQCMECGEKFLQDILCIAHYNKEHGKDGKRIDDYYSCYYMDCDYIAKSIHEKIRNRIYKCNECDKQYNNNSGLILHIRSRHQNNLEEEIAYCKDCDKHFRVKHHLDVHLRTHSRHVRDDMKKYICDICGEKFVNKQAVRSHIEMKHLGVTFECGMCNKILTSTRALMKHERDKHSGAPRPSPPDPKLCQICGKGFKINIAMALVCHYCHGVMKKIDDFKKQVEQSILLSKVPYASKAIGKLQRKKQKIISINPNELIYTENIQNVRIEGKKYGTKEPIIKSIKQEVDSKIDIELSEELIDTKYNVLCDTLMTRNNVLSGDTNDVSRHNFVELKNSGSRCDASRSKNNLSATAKITEILINPKHNEALNESRGDFEIEVPAWNINTDSSHEGDHKVLDGDRPNEDDTIVHDLPICQSVPLQVNTKPTPIDKFNGKIAIVFQTLEELQLEREAKARDAKYMKLKHKCEMCLVSYDHEDTLENHMKKHNKNIGDYICIVCHCVYATEAALKTHGECHFKSNHNEHMKHRRSHRKRPECGQCGKLISNIANLKRHIEAMHTKTNRVYKCKVCDKEYLSQAGFHLHCKSEHTDYNNPAFCTICKRQYKNRNILNSHLKRHSTHVADDQLRWVELNDSITSPYGRSYICGDCGQKFAGKFQMRKHIEYQHLKIKHQCKECNQTFNFEKTLKAHMRVKHSSVPKAIDNILCQYCGKGFKQAKSLQSHIWSHTGERPLQCSRCPANFAHSAALYNHNRLVHKVPKLNKQEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -