Basic Information

Insect: Mimas tiliae
Gene Symbol: ZIPIC
Assembly: GCA_905332985.1
Location: HG995246.1:12758566-12766388[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00024 0.016 16.0 2.9 1 23 226 248 226 248 0.99

2 12 0.062 4.3 8.4 4.4 1 23 256 279 256 279 0.95

3 12 0.11 7.9 7.5 0.4 1 23 283 306 283 306 0.96

4 12 0.00017 0.012 16.4 2.1 1 23 383 405 383 405 0.99

5 12 0.00018 0.013 16.3 1.1 1 23 413 436 413 436 0.97

6 12 1.5 1e+02 4.1 4.7 1 23 440 462 440 462 0.97

7 12 0.00012 0.0084 16.9 0.9 1 23 467 490 467 490 0.97

8 12 0.012 0.81 10.7 0.4 3 23 496 517 494 517 0.94

9 12 0.082 5.7 8.0 0.1 3 23 606 627 604 627 0.95

10 12 2.2e-05 0.0015 19.3 1.8 1 23 636 658 636 658 0.98

11 12 0.00023 0.016 16.0 1.5 1 23 664 686 664 686 0.96

12 12 0.00025 0.017 15.9 5.0 1 23 692 715 692 716 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00024	0.016	16.0	2.9	1	23	226	248	226	248	0.99
2	12	0.062	4.3	8.4	4.4	1	23	256	279	256	279	0.95
3	12	0.11	7.9	7.5	0.4	1	23	283	306	283	306	0.96
4	12	0.00017	0.012	16.4	2.1	1	23	383	405	383	405	0.99
5	12	0.00018	0.013	16.3	1.1	1	23	413	436	413	436	0.97
6	12	1.5	1e+02	4.1	4.7	1	23	440	462	440	462	0.97
7	12	0.00012	0.0084	16.9	0.9	1	23	467	490	467	490	0.97
8	12	0.012	0.81	10.7	0.4	3	23	496	517	494	517	0.94
9	12	0.082	5.7	8.0	0.1	3	23	606	627	604	627	0.95
10	12	2.2e-05	0.0015	19.3	1.8	1	23	636	658	636	658	0.98
11	12	0.00023	0.016	16.0	1.5	1	23	664	686	664	686	0.96
12	12	0.00025	0.017	15.9	5.0	1	23	692	715	692	716	0.97

Sequence Information

Coding Sequence: ATGTCTGATTTAAAAGCATGCGCAGTGTGTTTTTGTACTGATACAAAGCTGTACAATTTGAACAACGGTACTTTGAGACATGAATTTAACTTGGTGTCCGGCCTCAATACACAATCAAGCAACGGTATGCCAGAGTTTCTATGTGTGATTTGCTCGGCGCTCGTGAGACGGTCTGTTATGTTTCGAGACAAATGTCGGCAGGCGCATAATGCTTTAAAGGATTTATTGCTCAGGAGTAAAGAGATAAATAAATCTCATTTGCAGTCATTTAATAGCAAGGAATTTGTTATCATGCCACCACTATCATACCTAGATCTGAATCGAACCCACTATGAAGAAGTTGAGTTCCAATGGGTTCATCACAGCAGACTCATGACCACTACAGGAGACACAATACCAATAGCTCACTACACTACTATAAACAATCAACTTACATTTAGTGATATTACCGTAAAAAATAATTTGAATACAGAGTATAATGTAAAAATGGAGAGTGATGAGGATCAATGCAATATTAATACAAATTTTACCAAGAATGAAAATAGTATAGAACGGTTGATTGAGAGTGAAGTTGTTGGTTCACAACTTGATGAAGAATATGCCAGTATATATCCTATTTCAGTAAATGAAGCTAAAGCCGTGTTGGAGGTATATAAATTATTCCGCAGCGGGAAGTACAAATGTACAGAGTGTAATAAGGGCTATCATAATGAGGAACGATTGAACACACATTTGCGCATGCATGATAAACACATTAGTGGTAATTATCACTGCAACCTTTGTGAAAATCATTATAAAACTGATTCCCTTTTGCAAACACATATGTCTGAAAAACATATGTACAAGTATGTGTGCAAAAAATGTCCAGAAGTTAGTTTTGATAGAATATCAGCCCAGCAACATTATATGTCGACACATCTAAAAAAACGTCAACAGAAAAATTCTAATTTGAGTGAATCTCGGCCCACCTGGTTGAGTAAGAGAGGAGGTAAAAGAGTGAAAGGAGATTCGGCACTCAGACCTGTCAAAAACAAAAAAATTACGAAACTACCGGATGATTTCCTAAACTATAGTCCGATTCGCCAAGAAGAGCAATATCAACTGATTAATGATAGAAAGAAAACAAGGAATTATATTGATTCTGTGTTTAAATGTGAATTGTGTTATAGAGGATTCAGAGAATCAGGGACTTATGAGAAACATATGAAAAAACATGATCCGGTGCACGCGGGTAAATTTGAATGCGACATGTGCAAGGTGCGTTTTCGTGATCTCTGGAAACTCTCCAAACATATGAAACTCACGCATCTCTTCAAGTACTCCTGCCAACGGTGCAATTACATCTGTGTTAATAGGGAACAAGCCCATTCGCATTATAAATGGCATAATAACGTTACGTATGCATGTCCTCAATGTGAAAAAGTATTTAAAAAACTGTCCACTCGACTGACTCACATAAGAATGAAACACCCATCGACAAGTATATGCACTGTGTGTGGACATAGTTTTATCAGCGATAAAGGTTTATATAACCATAAGCTAATTGCACACACTGCTGAGGAGCGTGAGCTGAGTCAGTCAGCACCGGTAGACCCGACGGACCCGTGCTACTGCGCGGACTGCGGCTTGCACTTCCTCAACGACCATGCCTTCGTCACGCATCTCGGCAGCTCCAGCAAGCACGCTTCCACCAACCTTTCATCAAAACCAGGTCGCAAAATGGAACTAGCTTCGACGTCAGCCAAGGGTAATTTAAACAAACAAGGACGGCCGCGATCCAACATACTCAACAAAGGGATCAGTATCTCCACCAACTGTGAAGTGTGCGACAAAGTGCTGGTGAACGACGTGCAAGCTCGCAAGCACTACCAGTCGGAGCACCCCGGCACCGAGTACCTCAAGCGGTACATGTGCGACGTGTGTGGACACGTTTCTAGGCAATACGCGCACTTGTTGGTGCACATGCGAACACATACCAAGGAGAAACCCTACGAGTGTCCACACTGCGACCGAAAGTTCAGCATGTCTAGTAGCAGGGACCGTCACCTTGTCGTACATACAGGTGAAAAACGCTTTGAATGTCAGCATTGTAACCGTCGATTCACACAAAGCAATACAGTCAAATTGCACATACAGACGGTCCATCACAAAATACCTTACTTACCTTGGGTGAAGAAAAACAGGAAAAATCGTAAGGAATCAGAAGGAAATAGTGCGCCATTCAGATTAGGCACTGCCAACCCTTCGTTTTCGGATACACCACATAAACTACTGCTCGACACGCAAGGAGACTACCTTAACGCATATATCAATCATAATGATCATAACATGTCATAA
Protein Sequence: MSDLKACAVCFCTDTKLYNLNNGTLRHEFNLVSGLNTQSSNGMPEFLCVICSALVRRSVMFRDKCRQAHNALKDLLLRSKEINKSHLQSFNSKEFVIMPPLSYLDLNRTHYEEVEFQWVHHSRLMTTTGDTIPIAHYTTINNQLTFSDITVKNNLNTEYNVKMESDEDQCNINTNFTKNENSIERLIESEVVGSQLDEEYASIYPISVNEAKAVLEVYKLFRSGKYKCTECNKGYHNEERLNTHLRMHDKHISGNYHCNLCENHYKTDSLLQTHMSEKHMYKYVCKKCPEVSFDRISAQQHYMSTHLKKRQQKNSNLSESRPTWLSKRGGKRVKGDSALRPVKNKKITKLPDDFLNYSPIRQEEQYQLINDRKKTRNYIDSVFKCELCYRGFRESGTYEKHMKKHDPVHAGKFECDMCKVRFRDLWKLSKHMKLTHLFKYSCQRCNYICVNREQAHSHYKWHNNVTYACPQCEKVFKKLSTRLTHIRMKHPSTSICTVCGHSFISDKGLYNHKLIAHTAEERELSQSAPVDPTDPCYCADCGLHFLNDHAFVTHLGSSSKHASTNLSSKPGRKMELASTSAKGNLNKQGRPRSNILNKGISISTNCEVCDKVLVNDVQARKHYQSEHPGTEYLKRYMCDVCGHVSRQYAHLLVHMRTHTKEKPYECPHCDRKFSMSSSRDRHLVVHTGEKRFECQHCNRRFTQSNTVKLHIQTVHHKIPYLPWVKKNRKNRKESEGNSAPFRLGTANPSFSDTPHKLLLDTQGDYLNAYINHNDHNMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -