Mtil020858.1
Basic Information
- Insect
- Mimas tiliae
- Gene Symbol
- ZFPM1
- Assembly
- GCA_905332985.1
- Location
- HG995250.1:15506445-15518884[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.57 40 5.3 0.1 2 23 7 28 6 28 0.97 2 13 0.0051 0.35 11.8 0.2 1 23 983 1006 983 1006 0.93 3 13 6.8e-06 0.00047 20.8 1.5 2 23 1102 1123 1101 1123 0.97 4 13 4.1e-05 0.0028 18.4 1.1 1 23 1129 1151 1129 1151 0.99 5 13 0.0023 0.16 12.9 3.7 1 23 1157 1179 1157 1180 0.96 6 13 0.44 30 5.7 3.8 5 23 1193 1211 1191 1211 0.97 7 13 0.02 1.4 9.9 1.1 3 23 1218 1239 1217 1239 0.96 8 13 0.034 2.4 9.2 0.2 2 23 1260 1280 1259 1280 0.96 9 13 0.00021 0.015 16.1 0.7 1 20 1286 1305 1286 1308 0.92 10 13 0.0011 0.075 13.9 1.4 1 23 1316 1338 1316 1338 0.98 11 13 0.0055 0.38 11.7 7.2 1 23 1344 1366 1344 1366 0.98 12 13 6.4e-06 0.00044 20.9 1.3 1 23 1372 1396 1372 1396 0.98 13 13 0.0011 0.073 13.9 4.2 1 23 1402 1424 1402 1425 0.95
Sequence Information
- Coding Sequence
- ATGGATCACACGCAGGTGCAGTGCCCGGTGTGCACTCTGTACCTTCGGAATGGTATGACCTTGGAGTCTCACTTGGACACTCATCCTAAAGATCAGGTGATCAAAGCTCTGTGCTGTCTCACCACCAAGGGCAACAGTTTTGGAAGTAGAACCTCCACCCCACTCCATTCCGACCGTTCGTACAGGAGTAGGTCTCGTACCCCTGCTGCTGATGACAGATGGAATAGTTCACATCAAAGTGCTGAACATGATAGATACTGGCGGAGACCATCAAGCAGGACTCCTAAATCTACTCCTGTGACTAGTGTATCAGGAAGTGGTACTCCAGAAATAAGGATGGCAGAAATGCAATTTGAAGGCGGTTTAGCATCCTCTGGTCAGCATTCCCTGCCTCAGTATGCTATGAAAAGTGATAAAACACAGCAAACATATCAGAATACTGCGATGACAGACTTCGACCCATCATATAGTTTCTACCAGGATCAGCAAGAGGATAGAGAGATCAAGTTCTCCCGCAGTGCAGAATACTCTGCAATGGACAATAGTAATGTGTTCACATACAATGTGCCATCAATGGCTGCAGGAGTGAGGTTCCAAGCAAATAACACTTTGTTACCAAATGTATCAAAGAAACAACCTGACTTTGTTAAAATATTACCAAAACCAAGCAATATTGTAGTCAAAACGAATGTTGGTGGTGTCCAGTACATAGCATCTGGTGTGAAGCCCATGCATGTGATGATGCCTCAGACACCTGCTTTCGTACCTAAGAATGTCCACAATAACATGATTTTGCCGAACAGTACCCATTCATCCATAAATATTGAGAAAGCAATACCTCCACAACTGAACACCAACCCTTTCAATATACCTTCAGGAAACTTTCCACCAGGAATGTCAACTGTCATGACACAGAACTCACAGATTATATACAGAGAAATGGTGCACAATGTAGATGGTAAACCCTTTATTTCTAGTGTACCTGCAGTTATGACGACGGGAAGTGCTGCTACCTTGGCCCAGGCCAGTCCTTTGTACCAAAATGTAATGGTTGTGGACCAATTTGGTTCATGTATGTATACCACCCCCCAGCTACTTCCTAAGTCTTGTACCACTTCAATTTATTCAGAGAGTGGCTCTCTTATATCTGGCAGCCACATAAACAAATCACCTGCCCCTAGTGACCCTAAGACGTTAGTAATTGAAGTTGGTCCTATAATACCATCACAGAGTGCTTCTCCATGCACTACTACCTCAAATACTGCCATATCGACCCCAGAAACAACTATAAAGACTGATAAAGATAGTGTCAGTGTGAAGTCGGACTCCAGAAGTGATTCATCAAGTTCAACTAAGGGTCTGAAGATTTTAAGCAATATTAAAGTTGAAGTGCCTGTTCAGCATAACAAAAACATGGTGAACACCATCATGGACCTGACAGAATCCAATGATCAGGATTATCCTGAAGAGGAAATTGGTTGTCCGAAATTAGAGAAAATCTTGCCAAAAACGAATGACAAGCGAAGTTCACCTAGGCCTTCCAGTTCAAGCAATGATAATTTAGTTTCGCACTCATTTTCTGTGATAAAAAATGTTGGGAACCCTCCATCATACAAGGGCTCATCCAGCAAAGTATTAGATAGCAAATTAGACACTGAGTATGGTGATAGCTGTCCTGTACCCGATCTTATATGCAATGAGAAACCTTCAATATCACCTTGCAGTGAATTATCCGAGAATGGCGAGAACTCGACAGACCGCATTTCACCATCCCTGAAACTAGGTCGAGATAGACAAACGAAAAATAAAGAGACAGTGGAGAATAAAATTCAGGTGTCTGTGAAGCCATATAGGTTAAACGCACTAAGACTGAACAACCTTTATGTTAAAAAGAACAAGAAAGTTTTACAAATAAAAAATGCCAAACAATTTGGGACAAGCAGTTCGAGTAATATGGATACAGAACCAGTGCCGTCCTCTAGCCGATTGCCGGAAGATTATACAGTAAAGAAAAATGTTGAACGAAGTGAAGTTAGAGAGCATTCGACCTTGCAGACCGTGTCTGTTGAAGAGATAAAGGATAATGACGACAATGATGATAATAACGGGTTCGATGCTGATACCGAGGAGCACTCGATGGACATAGAACCGCCGCCGATGCCCACAATCAACAGCACAACTGAGTTCTCCACCACAGTGGACATGGTGCATGTAAAAGAGGAAATAAGTACAAGCAACGAAAGCGCGTTTAGCAGCGCTACACCTGACCGTGTTCTTGCGCCAATGGAGACGCTAAGACCTGTCAATGTCATCACCTACGGTAATCTCTCAGCGGATAATTTCGATGAAGAATCAAACCACAGAGAACTTATGACCATTGAAGCTGCATCAAAAAATAAACAGTTTGTAAGCATGATGAATGAAAATTACTTCGGCGAGAATCTGTACGCCGATTATTTTGGTCAAGATCGAGCGGAGCCTTTCGAGAATCGACAGCAACCGCCAAAGGAACCGATGTATGGTATGTGGGGGGAATCATCGCAGAAAGACAATGAGTTTGTACTGCCAAGCTTCATTCACGATAATTATAAGATGGCTGAGGGTGGGTACTCCGAGATTGGAGTAAGGGAGGTGATTGCCGACACTGATGGGGATGGGTGCGAGAGGGACAGCAAAGCGGACGTGCTTAGTGAGGGAAGGAGCGAGGGAGAGGTGCCGTTGAATATCTGCGCGGACGAGCGCATGCCGCCGCGCGGGGAGCTCAGCGGGCAGGAGAGCAATGGAGATATGGAATCAGCTTGGAATGGGATGTACCCTGAGGTGGCGCCTCCGGAGTCGTACGACCTGATGGCGCGCGAGAGCTGGATCTCTGACGGGTCAGACGTCGACGTCGGAGAGAAAAGGGAAACTTTAGACGATGATATTCAGTACCCCAAAGCTCGGTCGTATATATGTGCAAATTGCAATCTTAAATTCCCGACGACCAAAGAGTTGCGCGCGCATCGTGCGCAGGCGCATACCCTTACTGGGAAGACTACGTACAGCCGAATGATCACAGCACGGGCCATCAAGAAAGAAGAGAAGACAGATGACAATATGATAGCATGCACAATCATAGACTCGAAGGAATCAATTACGTCATCAATACTACAAGTATATGATATAAACGAGACTAAGACAAAGATCGAGGGTAGCATCAAGCAGGAAACCAAACGCAGACGGAAGGACTTCGTCTGCCCCACGTGCAAAGTGGATCAACTGACAGACGCAGCCTTTCACGCCCACCTCAAAATACACCCACTGGAGTGCTTGACTTGTGGCAAATGTTTCTACAGAAGGGCGAACCTGGCGCTCCATATAAAAACGCATTTAGGTATTAAAAATTACAAGTGTGACGTGTGCGAGAAGCGTTTCATAACGCGTCAGAAGTTGTCGGAGCATCAGAACGTGCACACCGGCCGCGCGCCCTACAAGTGCACCGTGTGCGACGACACCTTCAGACGATACTCCAACATGGTGCAGCACAGGGATCGGCATCACTTCGGCAAGCGTGCTCGCGTGCGTGACTTCGTGTGCCATTGTGGCGCGGTGTTCCACTCTCGGGCCAAGTTACACTGGCACCAGGAGACCCACGACCAGCGGCCCAAAGCGTGCCTCTACTGCAGCGACAAGTTCGTGCACGCGGCATCACTCACACGCCACGTGCGTCGCACTCACAACGAATACTACGTGGCGCCGCGGACGCGACGACCCGACCGACCTGCGCCGGACAATGTGCCCTGCCCTGTGTGCAAGCAGATATACCTCCGAACAAACTTGCGTTCACATCTTCAAACACACAGCGGGAAGCGTCCGTACGTGTGTGTTGTATGTAACAAGGACTTCACAACAAAATGGAACCTCAAACTCCACCGCTGGACTCACATGAGCCGCTCCTCGAAACCATTCAAATGCCATCTCTGTAAAGGAGCTTTCATCAGGCAGACAGAGTACATATCCCATATGAATGCGCACAAATCTGTCAGGCCTTACACGTGTAATTACTGCGGCTGCCAATTCATAAGGAAATATAACTGTCAAAGGCATGTCAGAGAGCATGAAATGGCGAAGAAATACGTGTGTAAAGTGCCAGAGTGTGGGAAATCGTTTCACAGGAGTTATTACTTGTCGGAGCATATGAAGGTGCACAGCGGCGCGAGGCCGTTCGCCTGCAACATTTGTGGTAAGACATCTAGCAATAAATCTAATCATAATAAACATGTAAAGATACATCACGCTCGCGAGCCCGTCGCTACTGAAGCCTAA
- Protein Sequence
- MDHTQVQCPVCTLYLRNGMTLESHLDTHPKDQVIKALCCLTTKGNSFGSRTSTPLHSDRSYRSRSRTPAADDRWNSSHQSAEHDRYWRRPSSRTPKSTPVTSVSGSGTPEIRMAEMQFEGGLASSGQHSLPQYAMKSDKTQQTYQNTAMTDFDPSYSFYQDQQEDREIKFSRSAEYSAMDNSNVFTYNVPSMAAGVRFQANNTLLPNVSKKQPDFVKILPKPSNIVVKTNVGGVQYIASGVKPMHVMMPQTPAFVPKNVHNNMILPNSTHSSINIEKAIPPQLNTNPFNIPSGNFPPGMSTVMTQNSQIIYREMVHNVDGKPFISSVPAVMTTGSAATLAQASPLYQNVMVVDQFGSCMYTTPQLLPKSCTTSIYSESGSLISGSHINKSPAPSDPKTLVIEVGPIIPSQSASPCTTTSNTAISTPETTIKTDKDSVSVKSDSRSDSSSSTKGLKILSNIKVEVPVQHNKNMVNTIMDLTESNDQDYPEEEIGCPKLEKILPKTNDKRSSPRPSSSSNDNLVSHSFSVIKNVGNPPSYKGSSSKVLDSKLDTEYGDSCPVPDLICNEKPSISPCSELSENGENSTDRISPSLKLGRDRQTKNKETVENKIQVSVKPYRLNALRLNNLYVKKNKKVLQIKNAKQFGTSSSSNMDTEPVPSSSRLPEDYTVKKNVERSEVREHSTLQTVSVEEIKDNDDNDDNNGFDADTEEHSMDIEPPPMPTINSTTEFSTTVDMVHVKEEISTSNESAFSSATPDRVLAPMETLRPVNVITYGNLSADNFDEESNHRELMTIEAASKNKQFVSMMNENYFGENLYADYFGQDRAEPFENRQQPPKEPMYGMWGESSQKDNEFVLPSFIHDNYKMAEGGYSEIGVREVIADTDGDGCERDSKADVLSEGRSEGEVPLNICADERMPPRGELSGQESNGDMESAWNGMYPEVAPPESYDLMARESWISDGSDVDVGEKRETLDDDIQYPKARSYICANCNLKFPTTKELRAHRAQAHTLTGKTTYSRMITARAIKKEEKTDDNMIACTIIDSKESITSSILQVYDINETKTKIEGSIKQETKRRRKDFVCPTCKVDQLTDAAFHAHLKIHPLECLTCGKCFYRRANLALHIKTHLGIKNYKCDVCEKRFITRQKLSEHQNVHTGRAPYKCTVCDDTFRRYSNMVQHRDRHHFGKRARVRDFVCHCGAVFHSRAKLHWHQETHDQRPKACLYCSDKFVHAASLTRHVRRTHNEYYVAPRTRRPDRPAPDNVPCPVCKQIYLRTNLRSHLQTHSGKRPYVCVVCNKDFTTKWNLKLHRWTHMSRSSKPFKCHLCKGAFIRQTEYISHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFACNICGKTSSNKSNHNKHVKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00859741;
- 90% Identity
- iTF_00063874;
- 80% Identity
- -