Basic Information

Insect: Mimas tiliae
Gene Symbol: -
Assembly: GCA_905332985.1
Location: HG995247.1:12186014-12227920[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.12 8.5 7.4 0.7 1 23 41 63 41 63 0.95

2 10 7.6 5.3e+02 1.8 0.6 8 23 67 82 66 82 0.85

3 10 1.1e-06 7.5e-05 23.3 2.6 1 23 88 110 88 110 0.97

4 10 5.1e-06 0.00035 21.3 3.4 3 23 118 138 116 138 0.93

5 10 0.00025 0.017 15.9 4.2 1 23 192 214 192 214 0.95

6 10 3.5e-06 0.00024 21.7 0.7 2 23 220 241 219 241 0.97

7 10 8.5e-05 0.0059 17.4 7.2 1 23 287 309 287 309 0.97

8 10 0.13 9 7.4 1.9 3 19 321 337 321 337 0.99

9 10 2.3e-05 0.0016 19.2 6.0 1 23 412 434 412 434 0.98

10 10 9e-06 0.00062 20.5 4.3 1 23 440 462 440 462 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.12	8.5	7.4	0.7	1	23	41	63	41	63	0.95
2	10	7.6	5.3e+02	1.8	0.6	8	23	67	82	66	82	0.85
3	10	1.1e-06	7.5e-05	23.3	2.6	1	23	88	110	88	110	0.97
4	10	5.1e-06	0.00035	21.3	3.4	3	23	118	138	116	138	0.93
5	10	0.00025	0.017	15.9	4.2	1	23	192	214	192	214	0.95
6	10	3.5e-06	0.00024	21.7	0.7	2	23	220	241	219	241	0.97
7	10	8.5e-05	0.0059	17.4	7.2	1	23	287	309	287	309	0.97
8	10	0.13	9	7.4	1.9	3	19	321	337	321	337	0.99
9	10	2.3e-05	0.0016	19.2	6.0	1	23	412	434	412	434	0.98
10	10	9e-06	0.00062	20.5	4.3	1	23	440	462	440	462	0.96

Sequence Information

Coding Sequence: ATGGAGGATACAGAATATAAGGAGCCCGATATATTTGCAATGGAAAACATAGTGAGACGTACTGTTTGGCCTAAAAATAAGTGTGCTGACATAATAAATGGCGAGGACAATGTGACTCGCTACTGCTGCGTGGCATGCCCGTTCAGATCTGATGATAAAGAGACATTGGAAACTCACTTGTTAATGCACAACAAGGACTATAGATTGAAGCGCAAGGAGCACTTGGACAGGCACACGGCTGAACACCAGGAAATGAGGCCGCATGTATGTACCGAGTGCGGTAAGGGATTCAAGAGGAAAGAGCATTTAAACATACATTTAACTATACACACTGGCTACAAGGGGCAGGAGTGTATCATATGCAAGAAATCCTTCTACCGCAAAGACCACTTGCAAAAGCACATGCAGACGCACACCAAGATATATATGGAGCAGAATTCAACTTCTATGGACGATCAAGAGTTGGACATAAAGCAGGAATTTACAGAGTACGAGAGCGATACACTGGAGATGGAGAGTCAATTACTATCGACGGAGCCTGGTTACATGAAGATCGAGAACGCCGAGCGACCTTACCTTTGCCTCGTGTGTAACAAAACTTATAAAAGGAAAGACCATCTCAAAATGCACAGTACAACGCACATGAAGAAGGATAAAGTGTGCCCTGAATGTGGAAAAGCTTTCCACAGGGATCAACAATTAATGGTCCACATGAACACGCACTTGAACCTGTTAACAAAGGACCCTGATGAGGCGGAGGGGGTGCCGATTGTTTATGATGATCAAGGCGAAATGATTGTCGATGAGACCAGTTACTTGGTGCCAAGGATACCAAAATCTAAATCAGAAGTAAGGAACCACGAGTGCACAATCTGTCACAAGCGGTTCAAGCGGAGACAGCATCTGAAAGTTCACGGCAACGTACATCTAAAGGAACAAACCAACGACTTTATAGTGTGGTGTTCGAAGTGCAATGCAGGATTCCGTACTAACCATGAATTCGAGAATCATCCATGTATGGCGTTGCAGTTCGAGACTTCTATAAAGATTGAAAACATGTGCGACGTAGAATACAGCGAAGGTGATGAGGAAGAAGAAGCGAACCCTCCACAGGAAGCCAAGAAGGAAAATAAATACCCTTTGGAATTTGTAGAGGTGGACCTGGGCGCTCCAGACGAGCCCGAGTACCCGATGATCCGGGACGAGTGCCACCTGCCCGTGCCGCAGCGTGTGTACGTCTGCAAGTACTGCTCCAAACCGTTCAAACGGAAAGATCACTACAAAATACATCTGCACATACATACGGGCGTCAAGTCCCACTTCTGCCCGGAATGTGGGAAAGGCTTCTACCGCAAGGATCACATGCAGAAACACACACAGATCCACGCCAAAGCAAAGCTAAGGCCAAAGAAGTCTCTCCCGGATCTGTTGCGCATCACTAGCTTGACGCCAAAGAGTGACATCAAACCAGAAATCACCATACATGCGCCATCTAACGCTAAACTACGCGTACCACTCCAGATCAAGGTGCCGTACCAAATGGTGATGTCGACGGATAGCGGTGAACAGTGTGCGGTCACCATCAACCCTACTGGTCACTCGCCGGATATGATACTCTCTTAG
Protein Sequence: MEDTEYKEPDIFAMENIVRRTVWPKNKCADIINGEDNVTRYCCVACPFRSDDKETLETHLLMHNKDYRLKRKEHLDRHTAEHQEMRPHVCTECGKGFKRKEHLNIHLTIHTGYKGQECIICKKSFYRKDHLQKHMQTHTKIYMEQNSTSMDDQELDIKQEFTEYESDTLEMESQLLSTEPGYMKIENAERPYLCLVCNKTYKRKDHLKMHSTTHMKKDKVCPECGKAFHRDQQLMVHMNTHLNLLTKDPDEAEGVPIVYDDQGEMIVDETSYLVPRIPKSKSEVRNHECTICHKRFKRRQHLKVHGNVHLKEQTNDFIVWCSKCNAGFRTNHEFENHPCMALQFETSIKIENMCDVEYSEGDEEEEANPPQEAKKENKYPLEFVEVDLGAPDEPEYPMIRDECHLPVPQRVYVCKYCSKPFKRKDHYKIHLHIHTGVKSHFCPECGKGFYRKDHMQKHTQIHAKAKLRPKKSLPDLLRITSLTPKSDIKPEITIHAPSNAKLRVPLQIKVPYQMVMSTDSGEQCAVTINPTGHSPDMILS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00858851;
90% Identity: -
80% Identity: -