Basic Information

Insect: Mimas tiliae
Gene Symbol: -
Assembly: GCA_905332985.1
Location: HG995250.1:15767994-15773126[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.2 14 6.8 2.1 2 23 34 55 33 55 0.95

2 14 0.00071 0.049 14.5 1.8 1 23 93 116 93 116 0.92

3 14 0.025 1.7 9.6 0.5 1 23 118 140 118 140 0.97

4 14 1.6 1.1e+02 3.9 0.0 1 23 176 198 176 198 0.91

5 14 3.9 2.7e+02 2.7 1.2 2 23 228 250 227 250 0.90

6 14 9 6.2e+02 1.6 0.5 1 13 257 269 257 275 0.78

7 14 2.8e-06 0.00019 22.1 0.2 1 23 285 308 285 308 0.92

8 14 3.8e-05 0.0026 18.5 2.8 1 23 324 347 324 347 0.96

9 14 0.00019 0.013 16.3 0.2 3 23 354 376 353 376 0.95

10 14 0.22 15 6.7 0.3 3 23 383 403 382 403 0.96

11 14 0.00035 0.024 15.4 0.2 1 20 408 427 408 430 0.95

12 14 0.0009 0.062 14.2 1.0 1 23 436 458 436 458 0.97

13 14 7e-07 4.8e-05 24.0 2.4 1 23 464 486 464 486 0.98

14 14 3.1e-05 0.0021 18.8 0.3 1 23 492 515 492 515 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.2	14	6.8	2.1	2	23	34	55	33	55	0.95
2	14	0.00071	0.049	14.5	1.8	1	23	93	116	93	116	0.92
3	14	0.025	1.7	9.6	0.5	1	23	118	140	118	140	0.97
4	14	1.6	1.1e+02	3.9	0.0	1	23	176	198	176	198	0.91
5	14	3.9	2.7e+02	2.7	1.2	2	23	228	250	227	250	0.90
6	14	9	6.2e+02	1.6	0.5	1	13	257	269	257	275	0.78
7	14	2.8e-06	0.00019	22.1	0.2	1	23	285	308	285	308	0.92
8	14	3.8e-05	0.0026	18.5	2.8	1	23	324	347	324	347	0.96
9	14	0.00019	0.013	16.3	0.2	3	23	354	376	353	376	0.95
10	14	0.22	15	6.7	0.3	3	23	383	403	382	403	0.96
11	14	0.00035	0.024	15.4	0.2	1	20	408	427	408	430	0.95
12	14	0.0009	0.062	14.2	1.0	1	23	436	458	436	458	0.97
13	14	7e-07	4.8e-05	24.0	2.4	1	23	464	486	464	486	0.98
14	14	3.1e-05	0.0021	18.8	0.3	1	23	492	515	492	515	0.98

Sequence Information

Coding Sequence: ATGGCTTCCACATTTCAAATGGCAAAAGACGAGGCGGTCGATCTGGATCAGATATATTCACTTCCGAAGCCGACCACGATAGATTTAATCGGCGGGATCTACTGCCATATTTGCGATTTCATATTCCTCACTAAGAAGGAGTACGACAGGCACTACAGTCAGCATGACACTGGTGTGAGAGAGACGGTATACAGCTGCGTGGTGTGCCGCAAGCAGTTCGACGGGTACCCCAGCTTCCGTGGACACTGCTACCTCAAGCATGTCAACAAGGATCGGTTCAAATGTGAATATTGCACTAAAATGTGTTCAAAATTGACAGCACTGAACAAACATGTGGCCGCCATGCACACTTTTATATGCTCATCATGCAACCAGAAATTCCTAACAAAAACCGAACTAGCAATGCACCAAATTATCCACAAGATCCAAAAGTCGAAGCCTCCACACCCATGCATTAGATGTGGCCAAAGCATCGAAAATTTAGACATGTGTGAACTCCACATTGAGGAGCACAGCACCACCGAGTACCCATGCCCAATCTGTGAAGACACACTGCCCAGCAAGCCTGAAGCCATCGAACATTTGACCAAACACTTTGGCGATGTACTTATCAAAACTGATAATGAAGAAGAATCGAAACCGTTGTATGAGGATTCATCCATAGACGTGATCGGCGGTATCCAGTGCTGCTACTGTGAAGAACTTTACAAGAACAGGATAGACTTCGATCTTCACTTTGTGACCGAGCACGGCGACAAAGATCTGATCTATACATGCATCATGTGCAACAAGAAATTCGACAAGTATGTGCTGTACGGGGACCATTGCTATTTTCACCTAACTAAGGACAGATTCGAATGCGACGAGTGCGGCAAGACATTCTCGCGCCTCTCGCTGTTGGTGGTGCATACCGAGGCTTTCCATCCCGATGGTGGCGGCGACGGCGGCGGTGACGGCGGAGACAAACCTTTCGCCTGCACACACTGCGGGCACAGCTTCGCCACCGGCAAGAACTTGCGTACGCACTGGCGGTCAGTGCACGCTCTCACACGCGCCGCGTGTCCACAACGTGGCTGCGGACGATCCTTCTCGTCGCCGCACGCGCTGCTGCTGCACGCGCGGGAACACGCGCCTGCACGCGCCGCCTGCAGACACTGCGGCCTGCGACTGTCCACGAACCCCGCCGCCAGCCGACACCTCGACGTGCACCGCGTCAAGCACTACTCCTGCCCGGTGTGTGACCGCGTGTATCGCGAGAAGTACCTGCTCGTGAAGCATGTGCCGCAGCACTTCGAGACCGTCCTGCACGTGTGTAAAGTGTGCGGTAAGACATATGACGCTCGGTCTCGGCTGATGGAACACGCCAAGTCGCACTCGGCGGTGCGTTCACACACATGCACATACTGCGGCAAAGGGTTCGTGAAGCCGTCACACCTCGAGCAACATCTGAACGTGCACACCGGCCGCAGACCCTACAAATGCACCAACTGTCCGAAAGCATTCGCCAGCTATCCTAACTGGGCGAAGCATCTGCAACGCATGCACAACGTCGATCACAAACAACTCAAGAAACAGTTGCCCATTGAAGCTGATACAAATATGAAACATGAAACAGTAGCAGCACCCGTTATGGTGGAACAGCCGATATTGGAGGCTCCGGAGACGGTTCAGACACCTGAAGAGAGTTTGGAGAGCACGCTGGATGACATCGACCCGCGCGTCATCGAGCGCGAGCTGCAGATGTTCTGCGATAACAACAACGCCACACAACCGTGCATCGACTTCGAGTTCGATGATATGCTGCCCACCGACACTGCCATGCCTGTTCCCGAACCTCCTGCTCCAATGGTCCTTCGCGAGTATGGTCCCGAATTCGTGAACCAGGGCGCCACCGCGGCCGGCGCGGTTATCGACCTCGACGACCACATCATGCCGCACATCGACCCGCTGCTCACCATCAAGAACGACTGGCAGAACTACCAGCCACTGTACCCGCCACGCTACCAGCCGATCTACCAGCAGTTATACCAACCGCAGTATGATGAACTCGCCGACGCCTCGAGACCTGTCCTCACCGATATATTCTAA
Protein Sequence: MASTFQMAKDEAVDLDQIYSLPKPTTIDLIGGIYCHICDFIFLTKKEYDRHYSQHDTGVRETVYSCVVCRKQFDGYPSFRGHCYLKHVNKDRFKCEYCTKMCSKLTALNKHVAAMHTFICSSCNQKFLTKTELAMHQIIHKIQKSKPPHPCIRCGQSIENLDMCELHIEEHSTTEYPCPICEDTLPSKPEAIEHLTKHFGDVLIKTDNEEESKPLYEDSSIDVIGGIQCCYCEELYKNRIDFDLHFVTEHGDKDLIYTCIMCNKKFDKYVLYGDHCYFHLTKDRFECDECGKTFSRLSLLVVHTEAFHPDGGGDGGGDGGDKPFACTHCGHSFATGKNLRTHWRSVHALTRAACPQRGCGRSFSSPHALLLHAREHAPARAACRHCGLRLSTNPAASRHLDVHRVKHYSCPVCDRVYREKYLLVKHVPQHFETVLHVCKVCGKTYDARSRLMEHAKSHSAVRSHTCTYCGKGFVKPSHLEQHLNVHTGRRPYKCTNCPKAFASYPNWAKHLQRMHNVDHKQLKKQLPIEADTNMKHETVAAPVMVEQPILEAPETVQTPEESLESTLDDIDPRVIERELQMFCDNNNATQPCIDFEFDDMLPTDTAMPVPEPPAPMVLREYGPEFVNQGATAAGAVIDLDDHIMPHIDPLLTIKNDWQNYQPLYPPRYQPIYQQLYQPQYDELADASRPVLTDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00063833;
90% Identity: iTF_00063833;
80% Identity: -