Basic Information

Insect: Mimas tiliae
Gene Symbol: -
Assembly: GCA_905332985.1
Location: HG995254.1:2186194-2197569[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.021 1.5 9.8 4.6 1 23 277 299 277 299 0.99

2 12 9.3e-05 0.0064 17.3 0.7 2 23 307 329 306 329 0.96

3 12 3.9 2.7e+02 2.7 1.1 1 23 333 355 333 355 0.94

4 12 0.00042 0.029 15.2 3.0 1 23 360 383 360 383 0.98

5 12 0.0031 0.22 12.5 0.2 1 23 387 410 387 410 0.96

6 12 0.01 0.7 10.9 0.0 2 20 427 445 427 447 0.94

7 12 1.5e-05 0.001 19.8 0.4 3 23 461 482 460 482 0.95

8 12 0.0099 0.68 10.9 2.7 3 23 505 526 503 526 0.96

9 12 0.0014 0.093 13.6 1.4 1 19 537 555 537 559 0.93

10 12 0.00012 0.0083 16.9 1.0 1 23 565 588 565 588 0.92

11 12 7.7e-07 5.3e-05 23.8 2.9 2 23 595 616 594 616 0.97

12 12 0.023 1.6 9.7 0.1 1 23 622 645 622 645 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.021	1.5	9.8	4.6	1	23	277	299	277	299	0.99
2	12	9.3e-05	0.0064	17.3	0.7	2	23	307	329	306	329	0.96
3	12	3.9	2.7e+02	2.7	1.1	1	23	333	355	333	355	0.94
4	12	0.00042	0.029	15.2	3.0	1	23	360	383	360	383	0.98
5	12	0.0031	0.22	12.5	0.2	1	23	387	410	387	410	0.96
6	12	0.01	0.7	10.9	0.0	2	20	427	445	427	447	0.94
7	12	1.5e-05	0.001	19.8	0.4	3	23	461	482	460	482	0.95
8	12	0.0099	0.68	10.9	2.7	3	23	505	526	503	526	0.96
9	12	0.0014	0.093	13.6	1.4	1	19	537	555	537	559	0.93
10	12	0.00012	0.0083	16.9	1.0	1	23	565	588	565	588	0.92
11	12	7.7e-07	5.3e-05	23.8	2.9	2	23	595	616	594	616	0.97
12	12	0.023	1.6	9.7	0.1	1	23	622	645	622	645	0.94

Sequence Information

Coding Sequence: ATGGCAAAGGATACAAAAATTAAAGCTTGTAGGATATGTTTGATTACAGACGTAAAAATGCATTACATTGATAACGTTTTAGAAGATTACATATCCATATTGGCAAATGATGAATCATACAAACGCTTTCCAAACTACATATGCTATGAGTGTGCATCTCTGTTGATGAAGTTTATTAAATTCAGAAAAAAATATATTGAAGCACAATCTATACTCTCAAATATGTTCAAAGAATGTAGTGAGATAACAAAACAAGATATTAAGGAAATAAATCTCTCTACTGTTGTATTGAAATCTTATTTGGGATACAAAAAATTACCTTCAATATCTGTCTATAAAAAAACTAATATAACTGAGGAAATGGTGGTGCATGAAGGGGCCACATCTGAAGATGAAGGTACCACTATTCTTGATGATAAGATCAAACTTAATGATGAAGAGACTGAGCTTGATGATGAGGATCGAGCTATAGCTGATGATGCAGAAATCAAACTTAGAAAAGTAGACTCAACTGTGGAGGATGAGTCAGATGACGATACACCTTTAATGTTTATCGTAATAGCTGACGAAGAAACAGAAGACGAAACAGATTCACAATTAGAAGTAGCCAAGGAAGTCGAAAAGCAGAAATGTGGACAGACGAGAAAGCGCGGTGTCGCACACAGTAAGTCAAGAGAACAGAAACCAAAACGGACTAAGACCTCCAGCGAATCGGCAGACAATGATATTGACTTGAACAAATATGTTTCTGTCATTAAGTTATCGATGCAGGAGCAACAAGAGGAATTCAACAAGCGCAAGCTATCGTCTAACTATAGAAACTCAGCGTACCGATGCAACCTGTGCTACAGGGGGTTCATACACACACAAGCGTGGAAACATCATCTCATGAAACACGATGCTAGTTCAGGCGACATAGAGTGTACCTTATGTAAGATCAGATTCAAAAAGAAGAGCCTGTTAAACTGGCATGCCAAAACAATACACGAGATGAAATACGTTTGCAAGTCTTGTCCACACATCTCGACGAGTGAACTAAAAGCGAAACTACATCAGAAATGGCATGATGGTGTCACATATAAATGTAAACACTGTGATGAAGAATACACAAACCGGACGTCATATTTAGGCCATTTAAGAATCAAACACCCGTCAGATTTTATTTGCGATGTGTGTGGGGACTCTTTTGTCAGTAAAACAGGACTCTCCATGCATAAGAATAGGATACATAAGGATACTGATGAGGCGGGAGGCGATGGTGAAAAAGAACCAGGTCCATACTGTAAGGAATGTGACATCAAGTTCGTATCGGTGGAGGCGTGGAATCGTCACATGGTCATCTCCGACAAGCACAAACAGACCGTGCAGTTTGAAAACTTGTGTCGCGTGTGTGGTAAAACGTTCAAGAGTTCTGAAGACCTGCAGGTCCATCGTCAGGAGGAGCACGCTCGGAAACCGCCCATCAATTTTGTGAACACGACCGGACACACCAACATGACCTGGCCCGTCAACTGTGAACATTGTTCAGAGCAATTCTTCAACAAGCGGGAATATTGGATTCACTATCGAAAGAAGCATCCGGGTGAAAACTATCCCGTTCAAAGGAACCACGTCTGTGATATTTGTGGAAAACGTTATCCAACCAGCACGCACTTAGGAACCCACAAATGGCAGCACTCGGAGAAGAAGCAGTTCAAATGCGGTCAGTGTGGGAAAGAGTTTTACAGCCCCGACAAGCTGCGGCTGCACGAGACGTACACACACTCCGACCTGCGACCGTGCCGCTGCACCGTCTGCGACAAGGCGTTCAAGAACAACGGCACGCTTGAACGACATCTCAAGACTCACAGTGGTGAGAAGCCGTTCATGTGCCAGATATGCGGCGCCACGTTCACCGCGGAGTGGAGCCGCAAGCTGCACGTCAGCACTGTACACGCGCTGCCCGGAGCATAG
Protein Sequence: MAKDTKIKACRICLITDVKMHYIDNVLEDYISILANDESYKRFPNYICYECASLLMKFIKFRKKYIEAQSILSNMFKECSEITKQDIKEINLSTVVLKSYLGYKKLPSISVYKKTNITEEMVVHEGATSEDEGTTILDDKIKLNDEETELDDEDRAIADDAEIKLRKVDSTVEDESDDDTPLMFIVIADEETEDETDSQLEVAKEVEKQKCGQTRKRGVAHSKSREQKPKRTKTSSESADNDIDLNKYVSVIKLSMQEQQEEFNKRKLSSNYRNSAYRCNLCYRGFIHTQAWKHHLMKHDASSGDIECTLCKIRFKKKSLLNWHAKTIHEMKYVCKSCPHISTSELKAKLHQKWHDGVTYKCKHCDEEYTNRTSYLGHLRIKHPSDFICDVCGDSFVSKTGLSMHKNRIHKDTDEAGGDGEKEPGPYCKECDIKFVSVEAWNRHMVISDKHKQTVQFENLCRVCGKTFKSSEDLQVHRQEEHARKPPINFVNTTGHTNMTWPVNCEHCSEQFFNKREYWIHYRKKHPGENYPVQRNHVCDICGKRYPTSTHLGTHKWQHSEKKQFKCGQCGKEFYSPDKLRLHETYTHSDLRPCRCTVCDKAFKNNGTLERHLKTHSGEKPFMCQICGATFTAEWSRKLHVSTVHALPGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -