Mtil005653.1
Basic Information
- Insect
- Mimas tiliae
- Gene Symbol
- -
- Assembly
- GCA_905332985.1
- Location
- HG995243.1:13588122-13597427[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0044 0.31 12.0 1.1 3 23 204 225 203 225 0.96 2 23 0.17 11 7.0 0.3 1 22 614 635 614 635 0.95 3 23 2.2 1.5e+02 3.5 0.3 1 22 677 698 677 700 0.87 4 23 0.0097 0.67 10.9 1.9 3 21 711 729 711 730 0.96 5 23 1.2 80 4.4 0.1 2 23 738 760 737 760 0.89 6 23 0.0029 0.2 12.6 0.2 3 23 781 802 779 802 0.94 7 23 0.00037 0.025 15.4 2.7 1 23 808 831 808 831 0.95 8 23 0.1 6.9 7.7 0.0 1 23 857 880 857 880 0.90 9 23 0.0044 0.3 12.0 3.5 1 23 885 907 885 907 0.97 10 23 0.014 0.95 10.4 0.2 1 23 913 936 913 936 0.95 11 23 0.00083 0.057 14.3 1.3 1 23 949 971 949 971 0.98 12 23 0.0043 0.29 12.0 4.3 1 23 1020 1043 1020 1043 0.96 13 23 0.0036 0.25 12.3 1.8 1 23 1103 1126 1103 1126 0.97 14 23 0.0016 0.11 13.4 1.5 2 23 1152 1174 1151 1174 0.95 15 23 0.079 5.4 8.1 0.2 2 23 1180 1202 1179 1202 0.95 16 23 0.0079 0.55 11.2 0.2 1 21 1246 1266 1246 1267 0.95 17 23 0.00098 0.068 14.1 0.6 1 23 1277 1299 1277 1299 0.93 18 23 0.0001 0.0072 17.1 0.3 2 23 1387 1409 1387 1409 0.93 19 23 2.6e-07 1.8e-05 25.3 1.4 3 23 1416 1436 1415 1436 0.98 20 23 0.0068 0.47 11.4 2.0 1 23 1452 1474 1452 1475 0.96 21 23 0.096 6.6 7.8 0.0 1 23 1494 1516 1494 1516 0.97 22 23 0.022 1.5 9.8 0.6 1 23 1522 1545 1522 1545 0.95 23 23 6.8e-05 0.0047 17.7 0.5 1 23 1553 1576 1553 1576 0.96
Sequence Information
- Coding Sequence
- ATGAGTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCCGATGACTCGGAACCTCCCGTCCTCGCTGTGAAAATCAAGGATTGCGTGTCCATACAGATAACCGAAAATGACGACTTGCCGACAAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATGTATTTAAGACTGTGTGTGAAAGGACTCAAAACAAACTACAGTCTCTGATTAATAAAGATGGCAGCCAACTAGAAGAGGTGAGAATAAAGAGTGAACCATTGTCTGATGAGGCCTATGATGATGGGGTTATTATTGATGGATCATATCCTGACAGTGAGAATGCCACCACTAGTAAAGTGCAGCCAGAAGGGCCTCCAATCTTGGCGTCGCTGGGGCTCACGCCGAGGAGTGATAAGGGCATGGAGAGCGAAAAAGACGAAGACGAGGAAGAGATGAATGAATCCGCCCAATCTTATAGCAAGGTAGCAAATATGCCGGAGGTTTCTATCACAGTCATGCGTTCCTCGGGTGAAACGCTCCACGCGCGACAAGGTATCCAACAACTAGCATCCAAAGATTGTCTCGTTTGCGGGAGGACTTACAGATACTCTCACAATGCCAGACGACACGAGCTTACGGCTCATAGTTTCGACAGGTACACCAACAAAATCACAAACAAGAAATCTCATAATATGCGTTTAGTACCTAAATTGAGACCTAACCCCTTCAATCCTCAGGCAAGATTAATGCCTAATCCTATTAGCCATAAAAGGCAATTCATACCTAAGAATATCCCAGCGAAAATAATACCTCAAAAAGTCATCACCCCACCGAAACCCATCCCCATTAAAACATCAAAGGCAGTTCATAACAATTTACCGTATCCTCTTAGAATAAAAGCGCTTAAAGATTTACAAATAAAGAAAAAAGAGCCGCAAATTTTAAAAACTCTGCTGACTGCAAAACCTGAAGTTTTAGTTTCCGAACCGGAAATTATCAATTCTGGTCCGGAAAGTCCTGAGACGTTAATATCTGAACCGGAAATTGCATCGTTCCAAGTGGAAACTATACTGTCCGAACCGGACCCTGAGGCTTATGACCATCAAGGAGAAGATGAAGCGGATGGTGAAGTTCATAATAATCAAAATCCAAACTACGACACTGTCGATATGGATTCTGAAAATGAAATTGAAATCGCTAGACAACACGAACACGATCAAGAAGGCGATGAACAAATGGAAGCACACGAAAATATGCATCATGATGATGATGATGATAACATGGATGCTGTCCAAAGTGATAATGATAATGAGAATGAGAAGGAGCACAATGAGGAAACTATTGACAGCCAAGATCAAATGGTGATCGAAGATAACACCGAAATTAAAACTGAAGAAGGTGGTAAGGATGAGGAAGAAGGTAATGAAGAGAAAGAACACGAAGAAAATGAACATGAAATGAATAATGAGGAAAACGATGATGATGATGAAGAGATGCCACCCATAGCGCCAGTGGTCGAAATCAATGAAGATATGCAAGGAAATACGTACAATAATGAGACAAACGAAATAAACGAGGAGGAGGAAGAAGAACTTGACGAAACTGCAGATCCTAACGACACTACCGAGACAAAAGAGCTCGACCCCGACAAAGTGTACGTAACGAAGACGCAAAGAGAATTCATACGAAAGTACCGTGACGTTATTGAACAAATTAATACTAAAAGATGTTTGTGCTGCGATCGAGAACATCCTCGTAGGAAAGCGGTCATACAACATTTACAGAAAAATGGACACAAAGTCCCCAAACATACGTGTTACAATTGCGTCATAACTTTTGGTCATATCGGAGCTTTACTAAGCCATATGAGATCTAATTCCTGTACTGATCTGTGGAAAATTATATACAATGAAAATGGTATTACCGATGACTTAGTACTGCAGGATGGGCCTAAAGATACCAAGGTTCAATATAAGGATATTTTCAATGCTAGATCTTACGCATGCAAGCTGTGCCCAGCAAAATTCCAACTGAAGCAGTTTATAATGAAACACATGGTGGACGTGCACGAGGATGGACAGTCCAGGGTGCCACTTGGCTGTGTTCACTGCCGAGCCAGATTTAAGGACAAGAATTTATTAAAGAAACATATTCGCAACGGCGAATGCACTGTCTATATATCTTGCGATCTATGCTCAGAAAAGTTTGGAAATATGCAAGATTTTAATGACCACGCACTGGCCGTCCACGCTGGTAGCTTCGACCAGTCTGATAGTGCAAACAAATGTGTAGACGGTCGGCCGACTGATTGTCCGATATGTGGAAAGAAAACACAAAACTATACACTTTTGGTAAAACATTTGAAAGCCATTCACAATGAGGAGAAACCTCATTATTGCAAGCATTGTGATGCCAAGTTTGAACAAGCTGCTGATCTTAACAAACACATTTACAAGGAGCACTCTGACAGATCATTCGTCATGCAGGGTAACGAGCCTGACATGTCTCTGGTGAAAGAAGAGGCTGAAGAATATCACTATTCGTGCACTGAATGCAACGCCATATTTGAAACTGTCGACGCTTGGACCGATCACCAAGTGGCTGAACATAACCAAGTCGCTCACCACTGCGATCAATGTGACAAGAAGTTCCTGCGACCCTCGGAACTCGCTGAACATAAAAACACCCATTTACGTGTGAAGTTCTATCCATGCAGCGTTTGCTCTAACTCTTATAGCACTCCACAGAAACTATCCGAACATGTTCAACAAGCACATCCCGGAATTAGAACATTGGGCCCAGGGGAATCTGAATTCTACTGCGATATATGCATCAGATCATTCAAAAGTCGCCAGGCTTATTCAAATCACATGCGTATCCACGCTAAAGTACCCACCACTAATAGAAAACCGGGTGATCCCAAAGGATTTGCACCCCAAATTATCGGAAAGCCTATTAAGCAGTTTTCTATGATGCAACCTGGATTTGTATCATTCAAGCCCAGCTATAATGTTCCTAATGCACCTTATTGCTGCGACCTATGTGGCAAAGGCTTTATGCACAAAAAGAATATTTGGAAGCATAAAAAGGTCTTGCATGCTGATATTATAAATGATAGAAATGACAGTGAAGAAAACACAATGCAGGCATCAACTGAAGAAGAGGAATTCAATAATGAAGAAAATGGCACCGGATTGTCGACGCCGCAATTTAACAGTTTCAACTTTGCGAACTTCACAAGTAATTTACAACAATCACAACAGGACCCCATGCCTTACTCTTGTGAATTGTGCTATCAACGGTTCCCGCTGCGAAGTAGTTTGTGGAAACATAAGCGAAACAAGCACGGTATTATCAATCCTAATATTGATGCTTCTGAATCGCAGCCGCAATCATCGGGAGGTGACGGCAGTAGCAGATCTAGTTGCACTATTTGCAAAATAACATTCGCAGACAAGAAATCTTACTACCGTCATCGAAAGAATGTCCACAAGTCATCTGTCCAAATGTGCAAACTATGTGGCAAGCCATTAAACTCGACGCTTGAACTCTATGAGCATTTAAAATCTGCTCATGCACGGGAGCTGTTGGGTTATAACGCAAACCAAGGGTCAAGTAAGTCTCAAGAACCACCTCAAGAAATTGAACCCGAATACGACAACGACAATGAGGCTGCCGACCCTAGTGTCGATTATCAAGCGAGATACCCTTGCGACACTTGCGGCAAACAGTTTGTTGGACTGCTCGCTTTGCAAAACCACCAGTGTATCAACCAACTTACTTCTCAACCGCAGACTTTCGACTGTGAAATCTGTCATAAGAGTTACACATCCATCGCCGCTTTGAAAAGTCATCGCGGTTGGCACTTACGCTCGCCTGACGGCAAGGCGGCCGCCAACAACTCCGGCCTGTGGATGCCGCAGCACAAGGTGACAAACAAGGTGAGCAAATACGAGGTCGTGGACCCATCGCAATTGGCCAAGGTGACACATTCCACTCCCGCCTCCGTCGCCAAGAGAAGATTACCACCCGAAGTGGAAGTGACCGTCGTGAATCCAAACAAGAAATTGCGATCCGACGACTCGATCGAAATGGAACAGCACAGTTCCAGCGCGATCGAGGATAGATATTGCTCGATTTGTGACAAGGAGTTCACCAAACGCGCAGCGTACCAACGCCACATGGACGAGGTACATCAGCCGAATTCGGTGTTTTGTCCGGTCTGCGACAAGAGTTTCACGCGAAAGTCGACACTGCTCGTGCACATGAAGAAGCATTACGAAGGAGGCGAAGGCTCGTCGTCCGCGATGATGGAGGACGAGTACTCGTGCGAGCTGTGCGGTGCGCAGTGTGATAGCGCGAAGAGTTTGCGAGCTCATCGCGAGCGGCATCACGGCGAGGACTCTGGTGAGTCGGATGAGGAGGTACCTCCAGCTCCTCCCGGTGAGTTCACGTGTGGGCAGTGCGGAGACGGTGTGGCCACGCCACGTGACCTCATCGCTCACCGCACCATGCACTCCACACCCACCAAGTTCTTCTGCAACATCTGCAAAGTGTACTTTGCGAGGGCACTGGATCTCTCATCGCATACTCGCGCGAGACACTCCGACAATGAAAAAGTGTTTTTCCCTTGTTCGATGTGCGAACGTTCGTATATGAATAAGAAGAGTTTACAGAGACACATTGAGATGGCTCACTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLAVKIKDCVSIQITENDDLPTNVCRKCMDNVNNWHVFKTVCERTQNKLQSLINKDGSQLEEVRIKSEPLSDEAYDDGVIIDGSYPDSENATTSKVQPEGPPILASLGLTPRSDKGMESEKDEDEEEMNESAQSYSKVANMPEVSITVMRSSGETLHARQGIQQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITNKKSHNMRLVPKLRPNPFNPQARLMPNPISHKRQFIPKNIPAKIIPQKVITPPKPIPIKTSKAVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIINSGPESPETLISEPEIASFQVETILSEPDPEAYDHQGEDEADGEVHNNQNPNYDTVDMDSENEIEIARQHEHDQEGDEQMEAHENMHHDDDDDNMDAVQSDNDNENEKEHNEETIDSQDQMVIEDNTEIKTEEGGKDEEEGNEEKEHEENEHEMNNEENDDDDEEMPPIAPVVEINEDMQGNTYNNETNEINEEEEEELDETADPNDTTETKELDPDKVYVTKTQREFIRKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLQDGPKDTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHMVDVHEDGQSRVPLGCVHCRARFKDKNLLKKHIRNGECTVYISCDLCSEKFGNMQDFNDHALAVHAGSFDQSDSANKCVDGRPTDCPICGKKTQNYTLLVKHLKAIHNEEKPHYCKHCDAKFEQAADLNKHIYKEHSDRSFVMQGNEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQAHPGIRTLGPGESEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIIGKPIKQFSMMQPGFVSFKPSYNVPNAPYCCDLCGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMQASTEEEEFNNEENGTGLSTPQFNSFNFANFTSNLQQSQQDPMPYSCELCYQRFPLRSSLWKHKRNKHGIINPNIDASESQPQSSGGDGSSRSSCTICKITFADKKSYYRHRKNVHKSSVQMCKLCGKPLNSTLELYEHLKSAHARELLGYNANQGSSKSQEPPQEIEPEYDNDNEAADPSVDYQARYPCDTCGKQFVGLLALQNHQCINQLTSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTNKVSKYEVVDPSQLAKVTHSTPASVAKRRLPPEVEVTVVNPNKKLRSDDSIEMEQHSSSAIEDRYCSICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEGGEGSSSAMMEDEYSCELCGAQCDSAKSLRAHRERHHGEDSGESDEEVPPAPPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCSMCERSYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -