Mtil019008.1
Basic Information
- Insect
- Mimas tiliae
- Gene Symbol
- -
- Assembly
- GCA_905332985.1
- Location
- HG995238.1:5081991-5092696[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-08 7.7e-05 22.7 0.0 1 38 207 244 207 249 0.91
Sequence Information
- Coding Sequence
- ATGACCACAGAAGTAACTGAGATAAAGACTTATTTCGGCAGATGTCGATGTTGTCTCGAATATGGTTACTTGAAAAACATGTGGAATGAGCACCACTGGGAAGGAGACACCGAAGTTTACGGCGAGATGATTACCGAGTGCTTCGCTTTTACCATGGAGAAGCCAAATAATGTTGATCAAGATCAGATTTGTGAGACATGCATCACCAGGCTACGAGATGCGTGCAAATTTAAATTCACAGTTATCAAATCTCAGAGGCAATTGATGCAACAAGTTACAATTGATGAGGACGCATTGGACTTTAAGGTAGAGAATGTGAAAGCAGAGAACTGCATTGAGGGTGACAGTGAAGAGCAGACTGCAGACGACCCTCAGAACCTGCTAGAAACGGATATAGAAATAGAAATTCACGATATGGGTGAGGGGGCTCTTGTGATCCCTCCAGAGGATCCTCCCTATGAAGACATTCAATATTTGGAGGAGGAAATTGTAATTGAAAAAGCAAACCACGAGCCTGATGATTCAATACCTGACGAGTCGGATGAGAGTGGTCCTTCAAAAACAAAATGGCCGAAAAAGTTGCCTCGAAACCAGAGAAATAAAAGATACTTACAGTACACTGAGGAGGACCTGCGTAACGGCATAGAGGCGGTCAAAAACCATAAGATGTCGCGGCTAGAGGCGGCGGAGTACTATAATGTACCACGGAAGACGCTCGCCGCAAGGTTGAAGATGGACATGGAAAATGTGCCGGATGCAAACAATAAGAAAATAGTATCTTTAGATGTAAAGCAGAAAGATTGTGAGATAGCAGGAGAACAGGTGAAGGGACGGCGCATGCGCACGCGCACCCCTCGTAGATGTAACGCAGCCAGAGATGAGAAGGAAGAGAGCGCCGCGCTCCAGGAGATGAAAAAGCACAAAGACAATATCAACACTATACTGCTATACTCGAATGCGACCATGGTGAAAGGACAATGGGGCGGCAATTACGTGTGTTGCTTCTGCCAAGAAAAGTTTCCGACGCCGGCCGAACTTAAACGTCACAACCTCGACACACATGAAGACGCACACGCTAAAGCAATTCACGTGAAATACGTCTCCGATCTGATAATCAAACTAGACATCACCGCGCTCCGCTGCCTCATCTGCGGCGGCAAGATCGACTCGCTAGACATGCTCATGAAACATCTCAAGGAACACAACAAGACAATTCACACGGATATCAATAACCACATAATCCCGTTCAAGTTTGAGAGTGACGTGTTACGGTGTGTCGCATGCCCCAAACAGTATCCTTACTTTAAAACGTTGTCGGAACACATGAACGAACATTATAAAAATTACGAATGCCTCACGTGCGGCCGAGGGTTCATCAACAAACAGTCGATGCAGACACACAGCTACCGGCACCAAAAGAATGTGGGCGTGTTTAAGTGCACGCATTGCTCGCGTGTGTTCGATACGCGGCACCGACGCAGCGCTCATGTGCGCAAGATCCACCTGCATGGCAGCAAGACTCGCAAGTGTCACTTGTGCGGCGAGCGGTTCTCCTCGAGCCCACAGGTGCAGGTGCACATGGTGAAGGCGCACGGCGCCAAGCCTATGGAGTTCAAATGCGACGCGTGTGACAAGAGCTACACAAACGCCGGCTCCTTGAACCTCCACAAGCGACGCTACCACCTGATGCTGCGCCCCAATAAATGCACGGAATGCGAGATGGCTTTCTTTTCTAAGATGGAACTGCGCTCGCACATGGTGACGCACACGCGCACCAAAGAGTTCCAGTGCGAGATCTGCGACAAGCGATTCGGCACCAAGTGCTGCCTCAACCAACACATGCGCGCTCATTTCGGCATCAAGCATTACCGCTGCGACTGGTGCGACTTGAAGTTCGCGGCACGTTCCAAGATGAAGCTCCACATGTTGAGGAAGCACAGAGAGGTTGTGTAG
- Protein Sequence
- MTTEVTEIKTYFGRCRCCLEYGYLKNMWNEHHWEGDTEVYGEMITECFAFTMEKPNNVDQDQICETCITRLRDACKFKFTVIKSQRQLMQQVTIDEDALDFKVENVKAENCIEGDSEEQTADDPQNLLETDIEIEIHDMGEGALVIPPEDPPYEDIQYLEEEIVIEKANHEPDDSIPDESDESGPSKTKWPKKLPRNQRNKRYLQYTEEDLRNGIEAVKNHKMSRLEAAEYYNVPRKTLAARLKMDMENVPDANNKKIVSLDVKQKDCEIAGEQVKGRRMRTRTPRRCNAARDEKEESAALQEMKKHKDNINTILLYSNATMVKGQWGGNYVCCFCQEKFPTPAELKRHNLDTHEDAHAKAIHVKYVSDLIIKLDITALRCLICGGKIDSLDMLMKHLKEHNKTIHTDINNHIIPFKFESDVLRCVACPKQYPYFKTLSEHMNEHYKNYECLTCGRGFINKQSMQTHSYRHQKNVGVFKCTHCSRVFDTRHRRSAHVRKIHLHGSKTRKCHLCGERFSSSPQVQVHMVKAHGAKPMEFKCDACDKSYTNAGSLNLHKRRYHLMLRPNKCTECEMAFFSKMELRSHMVTHTRTKEFQCEICDKRFGTKCCLNQHMRAHFGIKHYRCDWCDLKFAARSKMKLHMLRKHREVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063903;
- 90% Identity
- iTF_01010688;
- 80% Identity
- iTF_01010688;