Mlon012586.1
Basic Information
- Insect
- Microvelia longipes
- Gene Symbol
- stc
- Assembly
- GCA_018340805.1
- Location
- JACMZG010000032.1:7161234-7174824[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 1.8 2.3e+04 -3.4 1.6 15 19 440 444 439 444 0.81 2 7 3 4e+04 -5.2 7.1 4 12 473 481 472 481 0.90 3 7 4.1e-07 0.0055 17.8 17.4 1 18 485 501 485 502 0.97 4 7 1.7e-07 0.0023 19.0 17.3 1 18 538 555 538 556 0.98 5 7 0.17 2.3e+03 -0.1 1.8 7 13 560 566 560 567 0.85 6 7 4.5e-07 0.006 17.7 14.6 1 19 592 610 592 610 0.99 7 7 3 4e+04 -4.1 1.8 9 13 618 622 618 623 0.75
Sequence Information
- Coding Sequence
- atgtCAAATTACAACAGAAATTATCCAGGTCAAAGTTCAAACTATCCTGGTTACGATGGTGATTATCAAGGTTATGACGAGTCATCAAATTATCAAGGCTTCAACGAAACGTCAAATTATCAGGGCTTTGATGGCTCTTCTGGTTATCAAGGTTATTACAGCAATGAGGATGGAATTCAAAACGGACAGAATTATGGAAGAAGTGGCTACACGTGGTACAATCCGCAGTTTTATGGACAAGATCAGCAATTAGATCCTTCCTTTGTTCTCCCAAATAGTCAATGTaacgagcccAACGACTATGAAAAGGATTCAACATTCTATTCAAGGCAGTATGAGCCTCAGCCAGGTCCTTCTAGGTCTGGTTCATTAAATTATCCATCCAGGAGTAAAACATATTCATCAAACACTTCTAGAAATGAAGGTTCATCTAGGAATAAATCTTATACACCTAATTCATCTAGGAATTCTTCAAGGAATCAAGATTCAGCAAATAATTCATCTAGGGATCAATTGTGTACTTCAAATTCATCTAGAAATAATGATGTAGCAAATAATTCATCTAGGAATTACGATTCTGCCAATAATTCATCCAGGAGTGATAGTTCAGCAAATTATCCGTCTAGGAATGAAACGGACAGGAATCCACGGGAAACAGGAAGAACCGGAGGGAGACGGCAAGCCCCCGGTTCGGGCGCCAATCGGTTGTACCGGAACCCAAATGCTTACTATGGCACTACCCAGCATCCCCATACTACATATAACAGAAGTGACAATCAAGACAGGTCTACCAACTCTCAAGGGGACTCTAAAACGGAAGATCGTAGGAAATTACTCGCTGAAGTTGCAACACTGTTAAACCAAGAGCAGAGTGTTGATCAAAACGTGTCTAATCAGAGAGCCAGTCAGAACCAGGATCAAAACATGTCTAATCAGAGACCCAGGCAGGTGAAAACAGCTTTTACAACCAGACCTGATTATGATAAGAATAAGGAGAAAAACAAAGGATGGTCTGCTCAGCCTAATGATAAATTCTATCAGGATAAGTTTAAGAAGGACTTGAGGAGGTCTGACAATGAGAGGAAAACTAGTGATAGAAGAGAACCAGAGAATCAAAGAGAGAGGCTGGTTCAGCAGCTGTCCAGGGGGAAGCTGGACTGCTTAGTGTGCTGTGAGCGACTCAGGCATAGCAGTGCTGTCTGGTCTTGCGAGAACTGCTACCACGTGCTACATTTGCACTGCATTTCTAAATGGGCCCTAACCTCTACCAGCAAGcaaatggACGGGATCAAACTGCGTCAGGAAACCAAGTGGAGATGCCCTGCATGTCAACACCAGTACGACTCGATACCGGACAGGTACACGTGTTTCTGTACCAGGTACACCAATCCAAGGTTCATTAAGGGAGAAACGCCTCATTGCTGCGGTGAAGTTTGTTGTAAAGTCAGGACTTGCGGACATCCGTGTACTTTGCTTTGTCATCCCGGACCGTGTCCGCCTTGCAATGCTACTGTACAGAGAGAGTGTGgTTGTGGTAGAACTCAGCAGAGTGTTAAATGCAGCTCTACAGTGCTGCTAGAGTGTGAGTTGCTGTGTGCAAGGATGTTAGACTGCGGCAAGCATGACTGCTTACAAAAGTGTCATCAAGGAGACTGTCAACCTTGTCATAATACCCTTCAACAAGTCTGTCACTGTGGTAAGGAGAGTCGGCAAGTGAGCTGTGGTTCAGAGCCTAATTTCAGTTGTGGCACTGTTTGTGGCAAAGGGTTAGAGTGCGGCAAACACGAGTGTACAATGCCGTGTCATGCGGGGGCATGCGGCAAGTGTCCTTTTGATCCAGTTAGTTTTACAACTTGCCACTGCGGAGCTAAGCAAATCATAAGAGGAGCCGGCGAAGACGATTACAGCTGTCAGATCGGAGGAATCTTGCACTCATCTTCGTGA
- Protein Sequence
- MSNYNRNYPGQSSNYPGYDGDYQGYDESSNYQGFNETSNYQGFDGSSGYQGYYSNEDGIQNGQNYGRSGYTWYNPQFYGQDQQLDPSFVLPNSQCNEPNDYEKDSTFYSRQYEPQPGPSRSGSLNYPSRSKTYSSNTSRNEGSSRNKSYTPNSSRNSSRNQDSANNSSRDQLCTSNSSRNNDVANNSSRNYDSANNSSRSDSSANYPSRNETDRNPRETGRTGGRRQAPGSGANRLYRNPNAYYGTTQHPHTTYNRSDNQDRSTNSQGDSKTEDRRKLLAEVATLLNQEQSVDQNVSNQRASQNQDQNMSNQRPRQVKTAFTTRPDYDKNKEKNKGWSAQPNDKFYQDKFKKDLRRSDNERKTSDRREPENQRERLVQQLSRGKLDCLVCCERLRHSSAVWSCENCYHVLHLHCISKWALTSTSKQMDGIKLRQETKWRCPACQHQYDSIPDRYTCFCTRYTNPRFIKGETPHCCGEVCCKVRTCGHPCTLLCHPGPCPPCNATVQRECGCGRTQQSVKCSSTVLLECELLCARMLDCGKHDCLQKCHQGDCQPCHNTLQQVCHCGKESRQVSCGSEPNFSCGTVCGKGLECGKHECTMPCHAGACGKCPFDPVSFTTCHCGAKQIIRGAGEDDYSCQIGGILHSSS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -