Mlon012592.1
Basic Information
- Insect
- Microvelia longipes
- Gene Symbol
- NFX1
- Assembly
- GCA_018340805.1
- Location
- JACMZG010000032.1:7183652-7191333[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 1.3e-06 0.017 16.2 14.7 3 19 42 58 41 58 0.92 2 11 1.3 1.7e+04 -3.0 0.2 9 12 76 79 75 79 0.78 3 11 3 4e+04 -4.9 1.6 6 10 89 93 89 93 0.91 4 11 0.15 2e+03 0.1 8.5 1 11 99 109 99 110 0.92 5 11 0.58 7.6e+03 -1.8 0.6 4 10 114 120 113 120 0.88 6 11 2.3e-10 3e-06 28.2 14.0 1 19 126 144 126 144 0.97 7 11 3 4e+04 -6.2 2.7 10 13 153 156 152 156 0.69 8 11 1.1 1.4e+04 -2.7 1.4 6 10 173 177 172 178 0.79 9 11 3 4e+04 -9.5 15.5 8 19 189 201 180 201 0.64 10 11 0.0028 37 5.6 21.8 2 18 232 254 227 259 0.77 11 11 0.091 1.2e+03 0.7 13.4 1 18 265 285 265 286 0.80
Sequence Information
- Coding Sequence
- ATGTACAGCTACCCTTCCTTAGTTCATCACGGTCCACCCTTCGTGGATCGCATTTTCATGGAAAGTTGTTTGGATCCTGTAGAGTCTTGCGGTAACAAATGCAGTATCAAGCGTGCGGCGTGTACTCACGACTGCCCTGAAATCTGCCACAGTGGCAAGTGTCCTCCCTGTTCTGTAGTCATGACTTGCCAGTGCCGGTGTGGACATAATTCTAGTGTTAAAACCACATGCCATGACTTGAATACTCTGGGACAGAAACCTATGTGCAAGAAGAAATGTAGCAAGAAGCGAGCTTGCGCTAAGCACAAGTGCAACCAGGAATGCTGCAACGACTTGGTCCATGAGTGTCTGCTGCCATGCAACAAGACGCTGTCGTGTGGGCAGCACAAGTGTCAACAACTGTGTCACCGTGGCAACTGCCTCCCTTGCACTAGATTAGGTTTTGAAGAATTACGATGTCATTGCGGATATTCAGTTATCTATCCTCCTATTGACTGTGGTACCCGTCCTCCGGAATGTACCCAACCCTGTACTCGTAACCATGACTGTGAGCATGTACCCACACACGTGTGTCATAGTTTACCCGAGTGTCCACCCTGTACAGTGTTAGTGAGTAGAACATGTTACGGAGGTCACGAGACAAGGAAAGCAGTGTTCTGCTACATAGCTCAGTATTCTTGTGGTCTCCCGTGTGGCAAAGAACTGCCGTGTCATCATAGATGCAGCGAGCGTTGTCACGGAGGCCCTTGTCCCGCTGTTTGCAAACAACCTTGTACAACACCCCGCGACGCGTGTTCACACCCGTGTTCTCTTCCGTGTCACAAAGGAACTCCGTGTTCAGGTCAATCACCTTGCACGTCACAGCTGGAGATATCGTGCCAGTGTCAGCGTAGGAAACAGACGACGACGTGTAATGAGTTCCGCAGGACTTGGTTTCGATACCAGGCTGCTGCTCTGCAAGCCAACAAGGACCAAGTTATTGACCCAACTAAGATCAACACTAAAGTGTTGGAGTGCGATGAGGAATGCAAGTTGTACGAGAGGAACCTGAGACTTGCTATTGGTTTGCAGATAGCCAATCCAGATCTCTCTAACAAGTTAAAGCCCCAGTACAGTGAAATGATGAAGCAATGGGCTAAGAAAGACCCCAGGTTTGCTGATATGGTCCATGCCAAGCTTACACAACTAGTTCAGCTTGCTAAAGAGTCAAAAGACAGTTTCATGAagcaacttattatttttatggaatctcttgattttttaaatgttacatGGAGAAGAGCAAAAtggataaagaaattaatatcaTTGTACCCGTTTCTATCCCCTGGCTATGAGGAAGTAGACAATACTAGTAATGCTGATCCAGTTGAGCATGTCGATTTTTACCCTCGTGTAGTAAATCTATCAAATTACCAATTAAACAATGAGATGACTGAACTCCTAAATAAAggtcttaaatataacttagatGAAACCGATACTAATAAGTTTAAACAGTATATTGTCGACTTAGAAGTTGCTACATTGGGATTAGAAGACAAAGAGGAGAAAAAGCATGTTTTGGCTAACTCGGGTGCAACTTGA
- Protein Sequence
- MYSYPSLVHHGPPFVDRIFMESCLDPVESCGNKCSIKRAACTHDCPEICHSGKCPPCSVVMTCQCRCGHNSSVKTTCHDLNTLGQKPMCKKKCSKKRACAKHKCNQECCNDLVHECLLPCNKTLSCGQHKCQQLCHRGNCLPCTRLGFEELRCHCGYSVIYPPIDCGTRPPECTQPCTRNHDCEHVPTHVCHSLPECPPCTVLVSRTCYGGHETRKAVFCYIAQYSCGLPCGKELPCHHRCSERCHGGPCPAVCKQPCTTPRDACSHPCSLPCHKGTPCSGQSPCTSQLEISCQCQRRKQTTTCNEFRRTWFRYQAAALQANKDQVIDPTKINTKVLECDEECKLYERNLRLAIGLQIANPDLSNKLKPQYSEMMKQWAKKDPRFADMVHAKLTQLVQLAKESKDSFMKQLIIFMESLDFLNVTWRRAKWIKKLISLYPFLSPGYEEVDNTSNADPVEHVDFYPRVVNLSNYQLNNEMTELLNKGLKYNLDETDTNKFKQYIVDLEVATLGLEDKEEKKHVLANSGAT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -