Basic Information

Insect: Microvelia longipes
Gene Symbol: -
Assembly: GCA_018340805.1
Location: JACMZG010001908.1:288764-292434[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.042 5.2 8.8 0.4 2 23 219 240 218 240 0.96

2 18 0.081 9.8 7.9 0.4 3 23 250 270 248 270 0.92

3 18 0.00082 0.1 14.2 1.1 1 23 296 319 296 319 0.96

4 18 0.15 18 7.1 0.1 1 23 322 344 322 344 0.89

5 18 0.0077 0.94 11.2 0.1 2 23 352 374 351 374 0.95

6 18 0.015 1.8 10.3 2.2 3 23 470 490 469 490 0.96

7 18 0.24 29 6.5 3.1 2 23 555 577 554 577 0.92

8 18 0.0081 0.99 11.1 1.9 5 23 654 672 651 672 0.93

9 18 0.4 48 5.8 1.7 3 23 681 702 679 702 0.90

10 18 0.2 25 6.7 0.2 3 20 710 727 709 729 0.91

11 18 0.13 16 7.3 0.1 2 23 735 757 735 757 0.92

12 18 4 4.9e+02 2.6 6.3 3 23 763 783 761 783 0.95

13 18 1.5e-06 0.00019 22.8 0.3 1 23 791 813 791 813 0.97

14 18 8.8e-05 0.011 17.3 0.2 1 23 819 841 819 841 0.98

15 18 0.012 1.4 10.6 7.1 1 23 847 869 847 869 0.97

16 18 0.00026 0.032 15.8 1.5 2 23 876 898 876 898 0.97

17 18 0.00056 0.068 14.8 1.9 1 23 904 926 904 926 0.97

18 18 0.00066 0.081 14.5 0.9 1 23 932 955 932 955 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.042	5.2	8.8	0.4	2	23	219	240	218	240	0.96
2	18	0.081	9.8	7.9	0.4	3	23	250	270	248	270	0.92
3	18	0.00082	0.1	14.2	1.1	1	23	296	319	296	319	0.96
4	18	0.15	18	7.1	0.1	1	23	322	344	322	344	0.89
5	18	0.0077	0.94	11.2	0.1	2	23	352	374	351	374	0.95
6	18	0.015	1.8	10.3	2.2	3	23	470	490	469	490	0.96
7	18	0.24	29	6.5	3.1	2	23	555	577	554	577	0.92
8	18	0.0081	0.99	11.1	1.9	5	23	654	672	651	672	0.93
9	18	0.4	48	5.8	1.7	3	23	681	702	679	702	0.90
10	18	0.2	25	6.7	0.2	3	20	710	727	709	729	0.91
11	18	0.13	16	7.3	0.1	2	23	735	757	735	757	0.92
12	18	4	4.9e+02	2.6	6.3	3	23	763	783	761	783	0.95
13	18	1.5e-06	0.00019	22.8	0.3	1	23	791	813	791	813	0.97
14	18	8.8e-05	0.011	17.3	0.2	1	23	819	841	819	841	0.98
15	18	0.012	1.4	10.6	7.1	1	23	847	869	847	869	0.97
16	18	0.00026	0.032	15.8	1.5	2	23	876	898	876	898	0.97
17	18	0.00056	0.068	14.8	1.9	1	23	904	926	904	926	0.97
18	18	0.00066	0.081	14.5	0.9	1	23	932	955	932	955	0.94

Sequence Information

Coding Sequence: ATGGATTCCGGGAGATCGAGACCAAGAGAAGGGTTAGAAAGCTCTGTGGTAGGTTTAATAGAGTTAGAACCGAGAGGGGTTATAGGTGTGTCATCATCTTTATTAGCTAAACACTTCTGGCATTTCCAAGAGGTATCAAATGGAGACATTGAAAAAAGGAAGTCAATAGATCATGTCAGCAAGAATATtggtaaaaatgaaattgagGATGCCGGTAATGAACCTTTTATAGATGCTTCTAATTCCAACAGggtaaataaagataaaacacctAACGAAGATATATCTCAAGAAAGTAAGTGTGACGACTTGGTTTCTAAATTAGATGTAGAGGTTCAGGGAATCAATGGAGTCAGTATGGAGGTGTCTATCGACGGTAGGGAACAGGATGAAAGCAATCTGACCAGCGATGTATTTCTTAACGAGAATGCCGATAGTCAGTGTTCTTACTTCATGTGCGATCTCTGTCAGGCTCTAGTCAAAACAGAAGAAGAATTCGAGTTGCATGTTTGTGAGAAGAATGATAGTGACTTGACACTTTCCGACATGCTTGCTGAAAGCCAAGATACTGAAATCGACGAGAAAGGAGATAATGTAATAGAAATAACAATAGTCGATAGTAGAGAATCAAaaggagataaaaatatatttttaaaatgttacattTGTAATAAAGTCAAAACCAATAGAACGGATTTAGCACTTCACGTGCTTAGCCATTATCCTATTAAGAATAACGGAATATGTTGTCCTGTTTGTAATGCTGACTTCACAACACTGCTGGATTTTATGAATCATTATGATGGTCACGTTACCTGCAAACAGAGTTCTCATAAACAGAGCAAGTTAAATGCTATTTATAATGAAAGTGATGTCAGAGATTCTTTTACTTGTCGAATCTGTAAAAACGTCAGTAGTAGTAAAGAAGATTTAAACAGACATCTGAAGTTGTCTCATAACATGTACCCGTGTTTGTATTGTGAAAAGGCATTCCCGTCAgatcttaaaataaaagagcATTTAATACTTCATGAAGCCAAGGTTGGTAAAGATCAGTGTGAGTATTGTTTGGTGAAATTTAACAAGGCCGGTGAATTAGAGAGTCATATCGATAAAAATCACAGTAATATAAAACAGAGTAAAGCCTGTCCTGTCTGTAGGAAACAGTGTCTTTCTAGTTTTGCTGTTAAAAAGCACGTTGTTAAACGACACCTTATTCCTGTACTGCAGCAGGAAGTCAGAGAGAACTATTCCCACGGCTCCGATATAGTAAGAGATATGAAAAGTTTAGGTGCTTCGGAAGAATTGCTCCAAAGCATGACTGATGTCAATAAATCTGGTACTGCTGATTCTAGCCTGAAACAGTTTAAAATGATAGTCAACGTCGAAGCGAGTGATATCAATTTTTGTCTATTATGTGGTTTTACAACtaaaagtaagaataatttagACAGGCACAGAGAAAAACACAGTTCTAAAACTATCCCTTGTCCTCTTAATTGCAAGTCGTTGAGTTGCGACTCTGAAGAATTGGTGAGTCATTTATCAGAGTGTCACGATTTTAAAACGAGCGAGTCCTGTTGTCCCCACTGCTTGAGCGTACCGGCCGAGGACATTAACTTGCACATGAAAGCACTTCATAGTAAGTTTTACACTCACTTGACTTGCTTTGTTTGCAAGGATACGTTCTTTACGAGAGATCATTTAAAAGATCACTTCAGCGTTACTCATTTGATATCTTCTGAACAGAATTTGCAAGAGAAAGAAGACGTAGAAATGGATGAGAATAGTATGGATGTTGACAACCCTAAGGatagaaaagaaattaatgagGACAAGGAGTTAGACACTGCGCTCGAGACCATAGCTCGTTTGTCTCCTCAGTCGACTGACCAACCTCTCCCTCCTCAACAAACCGACACTCAGAGTGTCGATGTAACTTTAGAAGACATTTGTATCTATTGTAGGAAAGAGTGCTCGTCTCAAGAAGATCTCCTAAAGCACATGTCTAAACATTCTTCTGTCTCGGAAGATATCGACTGCCCTTTCTGCTCTGAGCTATTACACGACCAAGAACATCTAAGACATCATATGGTCGGAGAACATCCTATCAATGTTCATAACTATTGCTTGGCCTGTAGCAAATCCTTTCCCAGCAGAATTGCGTTCATGAAACATTTAAGTCAAAAGTGTTCTAACAGAACTTGCGTGTTGTGTAGTAAAATGTTTGCCAGTATCAAAGCCTTCTTACAACACCTGGCTTACGGCCATAGGAAGACAATGAACTGCATGTTTTGTAAGAAACtatgtaaaagtttaaaacatttgaaatatCATGAAAATATTCACATTAGGTATAAAGGCGCTACTTTTAAATGTGACGAGTGtggtaaaatatttactacTCCAGGAAGTTTGAGATCGCATTCAATCAGTCACACTGGTAACTATCCGTTTGTGTGCGAGTTCTGTGGCAGaggatttattagtaattatggTCTGAACGAGCACAGAGTGACTCATACAGGGGACGTTAGATACTGCTGCGAGCTCTGTGGCAAAAGTTTCAAACTCTACGATACTTACCACAAGCACCGGAACCAGCACGATGATCCCTTCCCAGCCAAATGTAGCGTATGCGGTAAAAAATTTCGCAACTCTTCTCGAGTCGCCGAACACAAGCGTAAAGTCCACACCGGAGAGAAACCATACGCTTGCCCCTATTGCCCTATGAAGTTCAACGTTTCCTCGTCTTATCGCATGCATTTATGTCAACACACACAGATATTTCCGTACAATTGTGAGATCTGTCCCAAGGGTTTTACTAGTCGGTTCAAATTTGGCAACCACATGGCTCAGAAACATAATGACACCTCCATTATAAAGTCTTCACCCTTAATGAAGAACGATGTTGCCACAACGTAg
Protein Sequence: MDSGRSRPREGLESSVVGLIELEPRGVIGVSSSLLAKHFWHFQEVSNGDIEKRKSIDHVSKNIGKNEIEDAGNEPFIDASNSNRVNKDKTPNEDISQESKCDDLVSKLDVEVQGINGVSMEVSIDGREQDESNLTSDVFLNENADSQCSYFMCDLCQALVKTEEEFELHVCEKNDSDLTLSDMLAESQDTEIDEKGDNVIEITIVDSRESKGDKNIFLKCYICNKVKTNRTDLALHVLSHYPIKNNGICCPVCNADFTTLLDFMNHYDGHVTCKQSSHKQSKLNAIYNESDVRDSFTCRICKNVSSSKEDLNRHLKLSHNMYPCLYCEKAFPSDLKIKEHLILHEAKVGKDQCEYCLVKFNKAGELESHIDKNHSNIKQSKACPVCRKQCLSSFAVKKHVVKRHLIPVLQQEVRENYSHGSDIVRDMKSLGASEELLQSMTDVNKSGTADSSLKQFKMIVNVEASDINFCLLCGFTTKSKNNLDRHREKHSSKTIPCPLNCKSLSCDSEELVSHLSECHDFKTSESCCPHCLSVPAEDINLHMKALHSKFYTHLTCFVCKDTFFTRDHLKDHFSVTHLISSEQNLQEKEDVEMDENSMDVDNPKDRKEINEDKELDTALETIARLSPQSTDQPLPPQQTDTQSVDVTLEDICIYCRKECSSQEDLLKHMSKHSSVSEDIDCPFCSELLHDQEHLRHHMVGEHPINVHNYCLACSKSFPSRIAFMKHLSQKCSNRTCVLCSKMFASIKAFLQHLAYGHRKTMNCMFCKKLCKSLKHLKYHENIHIRYKGATFKCDECGKIFTTPGSLRSHSISHTGNYPFVCEFCGRGFISNYGLNEHRVTHTGDVRYCCELCGKSFKLYDTYHKHRNQHDDPFPAKCSVCGKKFRNSSRVAEHKRKVHTGEKPYACPYCPMKFNVSSSYRMHLCQHTQIFPYNCEICPKGFTSRFKFGNHMAQKHNDTSIIKSSPLMKNDVATT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -