Basic Information

Insect: Microvelia longipes
Gene Symbol: salm
Assembly: GCA_018340805.1
Location: JACMZG010001863.1:48376878-48392493[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3.7 4.6e+02 2.7 0.0 3 21 46 64 44 65 0.92

2 10 5.4e-06 0.00066 21.1 0.9 1 23 309 331 309 331 0.98

3 10 1.1e-05 0.0013 20.2 2.1 1 23 337 359 337 359 0.98

4 10 0.22 26 6.6 2.1 2 23 659 680 658 680 0.97

5 10 6.5e-08 8e-06 27.1 0.6 1 23 686 708 686 708 0.97

6 10 0.00073 0.09 14.4 2.7 1 23 718 740 718 740 0.98

7 10 0.15 18 7.1 4.5 2 23 1001 1022 1000 1022 0.97

8 10 2.7e-07 3.3e-05 25.2 1.4 1 23 1028 1050 1028 1050 0.99

9 10 1.5e-06 0.00018 22.8 4.0 3 23 1165 1185 1163 1185 0.96

10 10 1.6e-07 2e-05 25.9 2.3 1 23 1191 1213 1191 1213 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3.7	4.6e+02	2.7	0.0	3	21	46	64	44	65	0.92
2	10	5.4e-06	0.00066	21.1	0.9	1	23	309	331	309	331	0.98
3	10	1.1e-05	0.0013	20.2	2.1	1	23	337	359	337	359	0.98
4	10	0.22	26	6.6	2.1	2	23	659	680	658	680	0.97
5	10	6.5e-08	8e-06	27.1	0.6	1	23	686	708	686	708	0.97
6	10	0.00073	0.09	14.4	2.7	1	23	718	740	718	740	0.98
7	10	0.15	18	7.1	4.5	2	23	1001	1022	1000	1022	0.97
8	10	2.7e-07	3.3e-05	25.2	1.4	1	23	1028	1050	1028	1050	0.99
9	10	1.5e-06	0.00018	22.8	4.0	3	23	1165	1185	1163	1185	0.96
10	10	1.6e-07	2e-05	25.9	2.3	1	23	1191	1213	1191	1213	0.98

Sequence Information

Coding Sequence: atgTTATGTGTTAATGATCATGTTAGCTATCGCTCAGATTTAGTGTCTCTGTTCTTTAAACCTGAAAGAACGAAGAAAGAAGCAACTGGATCCGAAGACGAAGGTGGGAGCAGCTGTGGAGAAGGAGGTGTTTGCTGTCCTGGGTGCCAGACAGAGGTGGGGAGCATGGGCGAATTGGAGGACCACCTCAAGGATTGCAGGGGAGGGAAGGCGGCCACGGGGGGCCCGGAGGAGGAGGCGCGTCGCCAAGATGCTGAAAACAACAATAGCTCCGTCGAAGAATCCGTCGGAGAACGAGCGGAACTCGGATTAGTTGCTGGTCATGTTACATTAGAAGCTCTTCAAAATACTAAAGTGGCAGTAGCTCAGTTCGCTGCCACTGCTATGGCTAATAACGCTGACAATGCTGCCGCTCTCCAAGAATTAGCTGTCCTTCAATCTACCCTATATACACTACAACAGCAACAAGTTTTACAGTTAAATCTTATACATCAACTCCAACAACAACTACAAATAACAAGGACTAAAGACGGCCCCGCTCCTCCTTCACCTTCACCAAAACCTATCACAAGTCCGGAACCTATAATTCCGGCTAGTCAGTCGGTACCGGCTACACCACCTCCCAGGCCGGTGACTCCGACACCTCCTCCGAAAACCTTAGTTCCAGAGCCATCAGCGTCTCTCCCGCCCTGCTCTGTCTCCTCCTCCTTCGCCTCCTCAATCATCACTAACCTGGATCCGCCGCCCTCCCCAAGTGAACCCAACACTCTTGAGATGCTTCAAAGGAGGGCACAAGAAGTATTAGACAATGCCAGCCAAGGCCTTCTCGCGAACAACCTGGCCGACGAGCTCGCCTTCAGAAAGTCGAAAGGCTCCCTCTCTCCGTACGACTCGAAATCCGGTAGGAACGAACCCTTTTTTAAACACAGATGCCGCTATTGCGGTAAAGTTTTCGGTAGCGATTCCGCCCTTCAAATACATATCAGGTCGCATACCGGTGAGCGTCCATTTAAGTGTAATGTATGTGGGAGTAGATTTACTACTAAGGGCAATCTTAAAGTCCATTTTCAAAGGCACACCGTCAAATTTCCTCACATAAAAATGAATCCTAATCCGGTCCCGGAGCACCTTGATAAGTACCATCCACCCTTACTCGCTCAAATGGGAGCACATCAAAGTTTACCCCCTGGTGTTTCCCCGCCTCCGTTTCCTACCGGATCCCAATTCGGTCTTCCTATGTATAGACCTTCGCATCCGTCATCTCTTGACGGGTCATTGTCTAGACCTATTGGTGTCTTCGGACCCCGAATCGACCCCCAAGATGTTCctgaaaatttaagtaaatctgTTTCCCAACCCTCACCCCAATCGACTGCAGACGGTGACGGCAGTGAACAATGTAAAAGAGAACTTGATGATATCGGTAAAGACTCAATTGAAGGCGACTCGTTACCAATTGATGGGTCTTCGCGCTTGAGTCCCAAACATGAATTCGAAGGCGAGTACGACTCGGAGCAGCCTATGGACAGATATCCTTCTCCTACTTCTTACGACGAATGCAGTTTTGACAGTAAATACACTAGTGAAGATGTCATCGGAGACAGAGAGAGTCCAGGACTAGAGAAGAATGACGACAGCCTGCAAGAGCAACCAGAAAATCTCTCTAATAAAAGTATGTCTAATATGGACCATTCTAATCTAACAAACGATTCCCGAATACCTCCACCCATCCAGTTTCCTTGTATCATTTCTCCTTCTAGTAGCGCTTCTTCAGGAAGTGTGCATAGACTGACTCCTAGAGGATTCGGGTCCGAAGATCCTTCCAAAGATCCGGCTATTTATTCTAATATGCTTCCTAGGCCGGGTAGTACCGACAACTCGTGGGAAAGTTTAATAGAAATCGATAAATCGTCTGAAACTTCGAAATTGCAAGCTCTCGTTGACAATATTGAACATAAGTTAACCGATCCTAACCAATGCGTAGTTTGTTTTCGCGTTTTATCGTGCAAAAGCGCTTTACAAATGCATTACCGAACTCATACCGGTGAACGACCGTTTCGTTGTAAAATATGCGGACGTGCCTTTACCactaaaggaaatttaaaaacccATATGGGTGTCCATCGAATCAAACCTCCTATGCGTACGTTACACCAATGTCCTGTTTGCCATAAAAAGTTCACGAACGGATTAGTATTGCAGCAACATATCAGATTACATACAGGTGAACCAACTGATCTAACACCCGATCAAATTCAAGCTGCTGAGATCAAGGACCCTCCACCGGATCCTCCTCCACCATTTTCAGCCTTATTTTCCCATTCCTTTCCCTTAAATAAAAACCCTCCATCTCATGTTTCTGTCGGCCTTCAGCCACAAAGTAACGATTCcgaatgtaataataatatcaaagatGATCAGAAGTCTAATGATAATGATCATGACAATGACAATGATAATGACCATGATAATGATCCTTTGGACGATTGTCGAGCCGGTAGTGTCAGCCCAATTTCAGACGCTGCCTTTTCAACTTCCCTTAATGCACTTGAAAATCAAGTTCGGACTATTACCAACATGTCctttcaaaataatcaaaagcaTATAAAAGAGTCTGAGGATAGTAATTTGGCTAACGATGACTTTGGGCCGGTTGCAGTGAACGGATCTGGTTGTGACGACTCAGAAGGAGGTTGCTCTCGAGATGGATCTAGCGGAGGTGGGTGCACACCACCGGCAGCACTGGACCTATCTGGAGCGGCAGCTGGTCACCCTCACATTCCTTCCGGAGGTGCCCCTCATCAGCAGGTGCCAAGTATCTTCCCTCCCTTTCCTCCGGGCCTCCTCCCCCCGCCGCCTCCCCAGGCGCCTCCATCGCCTCTCATCTCCTCCGCCCTATCGTCGCTCACATCGTCCGTGCTCACTTCGACCACCTTCAACCCCCTCGCGCTCACCGTCAATCACCCAGGTGACAGAAGATTTACCGGACGAGGCAATACCACGTGCCAGCTCTGCTTCAAAACATTCGCATGTCACTCAGCCTTAGAAATCCACTACCGAAGTCATACGAAAGAACGTCCGTTCAAGTGTACTATTTGTGATCGAGGGTTTTCTACTAAGGGTAACATGAAGCAGCACATGCTGACGCACAAGATTCGAGATATGCCGGCGCATTTGTTCGATCAGCAGTCGAGAGGAGAGAGTGCGAGTACCGGGACAACGACTCAAACCAGCGCTCCGCCTTCTGCTCCCTCAACACCGACTACTCCTAGACCTATGACTCCTCTGAAAGACGATGTTGAAATACCATCTAGACCTCCTAGCGAACCCCCTCAGAGACCGTCAGAGAGACCTCCCTCTAGACCTGACAGTTCTGACGAAGGAAGTATAACCATACCAACTCCACCTTCAAAACGTCCTCCACCTCTAGACCACTCCGATTCTATTCCAGCAGCTAAAAGACCTCACAGCTTGCCCAACAGTAAACATTTGTGTCATGTATGCAATAAGAACTTCTCATCATCTTCTGCCCTGCAGATTCACATGCGTACACATACTGGAGACAAGCCATTCCGATGTACTATCTGTCACAAAGCCTTCACCACCAAGGGAAATctaaagGTGCACATGGGGACTCACATGTGGACCAACGGTGCATCGAGGCGCGGCAGACGAATGTCACTGGAGTTACCACCTCTAGCTCCACAAGTACCTCCCCATCCTCCACAGCTCAAGGACTCTCCGGACTCTTACCCCCTCCCCCGCCCCCGGCCCGACCTCTTCTACCCATACCTACCAGCCCCATTCCTTAATGGCATTCATCAAAAAGTAAGCGAACTTGCTTCGACGGGCCAATTGACTGGTGGTGGTAATGGTATAACTATACCTAGTTTAGGAGGTTTTGGCATGGACCTTAAATCAGAGAGAGCTTCTCCTGAGCCAAAAATACCAATGCCTACTTCACTATGGTATTTTGAGAGAAGGCCACCCGGAGGAGATCCGGCTTCACCTTGCAGCGAAGGACTTACCGCATGA
Protein Sequence: MLCVNDHVSYRSDLVSLFFKPERTKKEATGSEDEGGSSCGEGGVCCPGCQTEVGSMGELEDHLKDCRGGKAATGGPEEEARRQDAENNNSSVEESVGERAELGLVAGHVTLEALQNTKVAVAQFAATAMANNADNAAALQELAVLQSTLYTLQQQQVLQLNLIHQLQQQLQITRTKDGPAPPSPSPKPITSPEPIIPASQSVPATPPPRPVTPTPPPKTLVPEPSASLPPCSVSSSFASSIITNLDPPPSPSEPNTLEMLQRRAQEVLDNASQGLLANNLADELAFRKSKGSLSPYDSKSGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTVKFPHIKMNPNPVPEHLDKYHPPLLAQMGAHQSLPPGVSPPPFPTGSQFGLPMYRPSHPSSLDGSLSRPIGVFGPRIDPQDVPENLSKSVSQPSPQSTADGDGSEQCKRELDDIGKDSIEGDSLPIDGSSRLSPKHEFEGEYDSEQPMDRYPSPTSYDECSFDSKYTSEDVIGDRESPGLEKNDDSLQEQPENLSNKSMSNMDHSNLTNDSRIPPPIQFPCIISPSSSASSGSVHRLTPRGFGSEDPSKDPAIYSNMLPRPGSTDNSWESLIEIDKSSETSKLQALVDNIEHKLTDPNQCVVCFRVLSCKSALQMHYRTHTGERPFRCKICGRAFTTKGNLKTHMGVHRIKPPMRTLHQCPVCHKKFTNGLVLQQHIRLHTGEPTDLTPDQIQAAEIKDPPPDPPPPFSALFSHSFPLNKNPPSHVSVGLQPQSNDSECNNNIKDDQKSNDNDHDNDNDNDHDNDPLDDCRAGSVSPISDAAFSTSLNALENQVRTITNMSFQNNQKHIKESEDSNLANDDFGPVAVNGSGCDDSEGGCSRDGSSGGGCTPPAALDLSGAAAGHPHIPSGGAPHQQVPSIFPPFPPGLLPPPPPQAPPSPLISSALSSLTSSVLTSTTFNPLALTVNHPGDRRFTGRGNTTCQLCFKTFACHSALEIHYRSHTKERPFKCTICDRGFSTKGNMKQHMLTHKIRDMPAHLFDQQSRGESASTGTTTQTSAPPSAPSTPTTPRPMTPLKDDVEIPSRPPSEPPQRPSERPPSRPDSSDEGSITIPTPPSKRPPPLDHSDSIPAAKRPHSLPNSKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTICHKAFTTKGNLKVHMGTHMWTNGASRRGRRMSLELPPLAPQVPPHPPQLKDSPDSYPLPRPRPDLFYPYLPAPFLNGIHQKVSELASTGQLTGGGNGITIPSLGGFGMDLKSERASPEPKIPMPTSLWYFERRPPGGDPASPCSEGLTA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00743973;
90% Identity: -
80% Identity: -