Basic Information

Insect: Microvelia longipes
Gene Symbol: -
Assembly: GCA_018340805.1
Location: JACMZG010001908.1:30982135-30996032[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00043 0.053 15.1 4.1 1 23 211 233 211 233 0.97

2 11 1.3e-05 0.0016 19.8 1.5 1 23 239 261 239 261 0.98

3 11 0.00011 0.014 17.0 2.7 1 23 267 290 267 290 0.97

4 11 0.06 7.3 8.4 3.3 1 21 296 316 296 318 0.95

5 11 0.00044 0.054 15.1 3.7 1 23 324 346 324 346 0.99

6 11 1.3e-05 0.0015 19.9 1.6 1 23 352 374 352 374 0.98

7 11 0.00049 0.06 14.9 0.8 1 23 382 405 382 405 0.97

8 11 0.00066 0.08 14.5 2.0 2 23 412 433 411 433 0.96

9 11 0.00032 0.039 15.5 0.3 2 23 440 461 439 461 0.97

10 11 2e-06 0.00024 22.5 1.7 1 23 467 490 467 490 0.97

11 11 7.8e-07 9.5e-05 23.7 3.6 1 23 504 526 504 526 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00043	0.053	15.1	4.1	1	23	211	233	211	233	0.97
2	11	1.3e-05	0.0016	19.8	1.5	1	23	239	261	239	261	0.98
3	11	0.00011	0.014	17.0	2.7	1	23	267	290	267	290	0.97
4	11	0.06	7.3	8.4	3.3	1	21	296	316	296	318	0.95
5	11	0.00044	0.054	15.1	3.7	1	23	324	346	324	346	0.99
6	11	1.3e-05	0.0015	19.9	1.6	1	23	352	374	352	374	0.98
7	11	0.00049	0.06	14.9	0.8	1	23	382	405	382	405	0.97
8	11	0.00066	0.08	14.5	2.0	2	23	412	433	411	433	0.96
9	11	0.00032	0.039	15.5	0.3	2	23	440	461	439	461	0.97
10	11	2e-06	0.00024	22.5	1.7	1	23	467	490	467	490	0.97
11	11	7.8e-07	9.5e-05	23.7	3.6	1	23	504	526	504	526	0.96

Sequence Information

Coding Sequence: ATGGAAGATGAAGGAGTCGCTCGCACTCCATCAGGAGAGACCATCACAGATATTCAAAACTATTTGGAAACcttcaataaagaaatagaagTTGGGCAAGATGCTAATCAGGTTCAGGTTGGAGTCAAATTCGAGGCTCAGAgtgGAGAAGTGGGTCAGGTAGGAGAGGGTGATGCAGAAGAAGGGACTTACTATGTTGATAGCTCAGGCCAGTACTATTATCAGAGTAAAAATGCTCAGGGTCAACCTGTTATGACTCTAGTACaagGTCTACCATCTTCAGTGACAGATGTTGAAACAATCGACCCTAATCGCTCTGATGATGGACCTTCAACTTCAGAAGaggTACAAGTTGTAGCTGGAGATAGGAGTGTGGTTCTTAATACTGGTGATCCATACCAGACAGTGACTATAGTGCCCTCACAGACTAACCAGGGTGAAGTTAGTTACGTTCTCATTGTACAACAACCTGATGGCAAGGAGAAACAGGATGATCAGGATTTAACTGTTTATGATTTTGAAGATCATGAAGAACCTCCTTCACAATCTGCTGctgaatCTCAAGATGAAgaagataaaactaaaataatcaaaatagttCCAAGGAAATCACAAACAGTTTCCCAACCTCATATGTGTAACTACTGCAATTATACTAGTCCTAAAAGGTATTTGCTATCAAGGCATATGAAATCTCATTCAGAAGAAAGGCCTCACAAGTGCAGTGTGTGTGAACGAGGTTTCAAAACACTAGCATCTCTCCAGAATCATGTCAATACACACACAGGAACCAAACCTCACAAGTGTAAATACTGCAGTAGTGCTTTTACCACTTCAggtgaACTTGTCAGGCATGTAAGGTATAAACACACACACGAGAAACCTCATAAATGCTCTATATGTGATTATGCTAGCGTTGAACTTAGTAAAATGAGAAATCATATGAGATGCCATACTGGAGAGCGTCCTTACCAGTGCTCACATTGTACATATGCCAGTCctgatacatttaaattaaaacgtcATTTAAGAACCCATACAGGAGAGAAGCCATATGAATGTGATATTTGCCACCTAAGATTCACTCAGTCAAACAGCCTCAAAGCTCATAAACTTATTCATAGTGctGGAGACAAGCCTGTTTATCAATGTGAACTTTGTCCTGCTACATGTGGTAGAAAGACTGATTTAAGAATACACGTACAAAAACTTCATACATCTGATAAACCATTGAAGTGTCGAAGATGTGGAAAACAATTTCCTGATAGATATTCATATAAGGTTCATAATAAGTCCCATGAAGGGGAAAAATGTTGGAAATGTGATTTATGTCCATATGCTTCGGTATCACAGAGACACCTTGAATCTCATATGCTTATACATACCGATCAGAAACCTTATCAGTGTGAACAGTGTGATCAggcaTTCAGACAAAAACAACTTCTACGTCGTCATCAAAATTTGTATCACAATCCAAATTACATTCCACCTGTGCCAAAAGAGAAAACACACGAGTGTCCGGAATGTCATCGAGCTTTTAGGCATAAAGGAAATCTTATTAGACATATGTCAGCTCATGATCCTGAGTCTTCTGCACAAGAAAAAGCACTCGCTCTTAAAATTGGACGACAGAAAAAGGTATTGTTTACAGCATTAAATTATGTCAACTACCTGTTTTATTGTTTAGCTAATAACAAAACTGTTTAA
Protein Sequence: MEDEGVARTPSGETITDIQNYLETFNKEIEVGQDANQVQVGVKFEAQSGEVGQVGEGDAEEGTYYVDSSGQYYYQSKNAQGQPVMTLVQGLPSSVTDVETIDPNRSDDGPSTSEEVQVVAGDRSVVLNTGDPYQTVTIVPSQTNQGEVSYVLIVQQPDGKEKQDDQDLTVYDFEDHEEPPSQSAAESQDEEDKTKIIKIVPRKSQTVSQPHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHKCKYCSSAFTTSGELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRCHTGERPYQCSHCTYASPDTFKLKRHLRTHTGEKPYECDICHLRFTQSNSLKAHKLIHSAGDKPVYQCELCPATCGRKTDLRIHVQKLHTSDKPLKCRRCGKQFPDRYSYKVHNKSHEGEKCWKCDLCPYASVSQRHLESHMLIHTDQKPYQCEQCDQAFRQKQLLRRHQNLYHNPNYIPPVPKEKTHECPECHRAFRHKGNLIRHMSAHDPESSAQEKALALKIGRQKKVLFTALNYVNYLFYCLANNKTV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -