Basic Information

Insect: Microvelia longipes
Gene Symbol: -
Assembly: GCA_018340805.1
Location: JACMZG010000022.1:1081396-1095265[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.39 48 5.8 0.7 1 23 379 401 379 401 0.91

2 17 0.0067 0.81 11.4 0.5 1 23 407 429 407 429 0.98

3 17 0.0019 0.23 13.1 0.3 1 19 436 454 436 457 0.94

4 17 0.099 12 7.7 4.7 2 23 465 486 464 486 0.90

5 17 0.00023 0.028 16.0 0.5 2 23 494 516 494 516 0.93

6 17 2.7e-07 3.3e-05 25.2 0.5 2 23 526 547 525 547 0.97

7 17 7e-07 8.5e-05 23.9 1.4 1 23 557 580 557 580 0.96

8 17 0.015 1.9 10.2 3.3 2 23 630 651 629 651 0.96

9 17 0.00066 0.08 14.5 1.3 1 23 657 680 657 680 0.97

10 17 0.00088 0.11 14.1 0.6 1 23 698 720 698 720 0.98

11 17 2.3 2.8e+02 3.4 2.2 1 23 726 749 726 749 0.92

12 17 6e-06 0.00073 20.9 0.8 1 23 764 786 764 786 0.97

13 17 6.1e-07 7.5e-05 24.1 0.2 1 23 792 814 792 814 0.98

14 17 0.013 1.6 10.4 0.8 1 23 820 842 820 842 0.98

15 17 0.0009 0.11 14.1 3.4 1 23 848 870 848 870 0.98

16 17 0.0001 0.012 17.1 4.2 1 23 876 898 876 898 0.99

17 17 2.2e-05 0.0026 19.2 0.5 3 23 906 927 905 927 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.39	48	5.8	0.7	1	23	379	401	379	401	0.91
2	17	0.0067	0.81	11.4	0.5	1	23	407	429	407	429	0.98
3	17	0.0019	0.23	13.1	0.3	1	19	436	454	436	457	0.94
4	17	0.099	12	7.7	4.7	2	23	465	486	464	486	0.90
5	17	0.00023	0.028	16.0	0.5	2	23	494	516	494	516	0.93
6	17	2.7e-07	3.3e-05	25.2	0.5	2	23	526	547	525	547	0.97
7	17	7e-07	8.5e-05	23.9	1.4	1	23	557	580	557	580	0.96
8	17	0.015	1.9	10.2	3.3	2	23	630	651	629	651	0.96
9	17	0.00066	0.08	14.5	1.3	1	23	657	680	657	680	0.97
10	17	0.00088	0.11	14.1	0.6	1	23	698	720	698	720	0.98
11	17	2.3	2.8e+02	3.4	2.2	1	23	726	749	726	749	0.92
12	17	6e-06	0.00073	20.9	0.8	1	23	764	786	764	786	0.97
13	17	6.1e-07	7.5e-05	24.1	0.2	1	23	792	814	792	814	0.98
14	17	0.013	1.6	10.4	0.8	1	23	820	842	820	842	0.98
15	17	0.0009	0.11	14.1	3.4	1	23	848	870	848	870	0.98
16	17	0.0001	0.012	17.1	4.2	1	23	876	898	876	898	0.99
17	17	2.2e-05	0.0026	19.2	0.5	3	23	906	927	905	927	0.96

Sequence Information

Coding Sequence: ATGAAGTTAAAGCTAAAGAACACATCGGGTGAATCAGTAACACTGATTATAAAACCAGAAGATACATTCATAGACTTGCGGGAGAGAGTTGCAGAGGAGCTGGGTCTGCGATTAGATCTCAGTGATATTGTTAATGGAGAACATTACTTAGAGACTCAGAGAGTTTTAGATTTCTTCTCCCAATTACCAAAtgGAGATGATAGTTCATATGTTAGCAATGACGAAACAATACACTTTGACTGCATAGTTCCCGGGTGTAACAAGAAGAAGTCCACTCACCCCCATCTCTCTTTCTTTGAATTCCCTCAGGAAGAACTCAGgAATCATCAGTGGGCTCTGTACTGCCAGAGATTGCTCGGACAGTCAGGCAAGAAGAGACTCAACATAACCTCCTCGTCACGAATCTGCTCCGACCATTTCCGTCCTGAACATTTTGTCAAAAATGCTGGTACGATTCTGAAACGGACTGCAGTACCCTGCATCAACCCTGAAGTGGCTCCCACCCAGTCTGTAATCCACACTGAAAGCCCAGATATCAGCTATGTTGCCAATCACAGTGTTTTCGATAAGATTGTCAAGAAGAGACCTGTATGCCGACTGTGTGCCAAGTTCACTGATAACAGCATTTATCTCTTTGACGAGACTAGCCACCCACTGACCTTGGCCCAGAAGATCAACTCTTGTCTCCCAATTAATgtTGATATGTCAGGATCGCTGCCCAAACAGATCTGTACCGACTGTTTCATTAGCGTAGAGAAATTGTTCAAATTCTCTGAATCCTGTATTGAGACTCATACAGAGCTTAAGAACAAAGCCAGCGAGCAACAGCTGGGTGAGAGTATAATAGCCAGGTCGGATGAGGCTGAAGACAAGCCAGGTTTGGTATTAAGCTGTGATTTCACTCAGGAACTGATAACATCGTCCTGCTGTTCAGGAACTGACTGCTCACTGTGTGGAGACGGCAAACTCACCTTGACCAGCTTGGCTTTTCCAGACAGGGTTCCCCTACCCCTCTCCGATCCAGTAATATCGGTCAAATCCATCAACTCTATTAATGAAACATTCTCACCTCCAACCAAGATCAAAGAGGAGAAATTAAACGATAGCTGGGAAGCTGCCGACAACGCTTTCAATTATTACTGCAATCGGTGCTCGGCTGATTTCAAATCCTTTTCTGATTTACTACCACATTCTCTCATGCATTCTGAGGACGGGAACTATGTTTGTGTTTTGTGTGATTTCGTTGGCGAACGAAAAACAGATCTAACGAGTCATTTTAAAACTCACGATGTGGAACCTGCCATCTACCAATGTGATAATTGTGGCATTGGATTTAGATCTTTATCGTTGTTTGAAATACATAACTGTATCACTAATAACTGCTCTTTAAATAGGTGTAATGTATGCCATAAAACTTTTAGATCAGAGAGTCGATTGGAGTTCCATAAGAAGTTTCACGACTCTGACAATAAGCCTGGTCAGTGTGAGTACTGCCCAAAGAGTTTCAGCGACGAGATGAAACTCTATAAACATGTCACTTACCTGCATAGTGATAAGAAATCAAATAAGAATATTAGCTGTGAGGAGTGCGGCAAGTCTTTCAGATCTCTTAgttctttaaaatatcatttgcGGGTTCATCTAGGTGAACCTCTTTCAGTTCGACCCTTCAGCTGTGATATTTGTAGCAAGTCATTTAGCAGGAGAAGTATGTTAAGGAATCACATATCAGTTTTTCATAAAACACTCTCTCAAGAAACTGACTGTTTCATGTGTGGACTTTGTTACGAAATTTTTCCCTTTAGCGATTCCGCTTGTTTTCATTTGGAAAAAGCTCATCCGTTGAATTCGGAAGCCACTTATCAGAGTATCAATTCCAAAGTTTTAGTTTGTGAATTTTGCAAACGCTGTTTCCCTTCTTcgacttatataaataatcatcGGAGTCGCCATAAAAACGACACTCCTTATGAATGTAAACATTGTGGTTACGAATTTGAAACGGACAAACAGATGGAGTCGCATGTTCAGAGCGAACACACTGAAGCTGTTTCTAAAGAATACCTATGCGAGTTCAACATGCCTCCGCTATACTCTTGTGAATATTGTGATAGAGACTTTATTAGTTTAGTGAAATACACAGAGCACCAGACGATTCATTATGGAAACACTCCGTATATGTGCAGATTGTGTGACTTGAAGTTTCCTTCTCTGGAGGACTGTTATTCCCACAAACTAACTCAACACCCTGAGGAGAGTGACAGCAATAAAACTAACTACTACCGACCTTTTGACTgtcattattgtaataaatcttTTGCTATTGAAGATGCTTTAGTAAAACATATTAGGATGCATACTGGTGAAAAACCTTTTATATGTGACGTTTGTGGGAAAGCCTTCTCCCAAAGTTCAGGATTGTATACACATCAGAAAGTGCATTCGACAGATAGACCTtatagttgtactttgtgtCCCAGAAAGTTTAAAATCAAAGGAGACCGTGACATACACGTAAGGAAGCACTCGGGGGAAAGACCTTACAAGTGTGAGTTCTGTGGGAAAGCCTTCATGACTCAGCATGTCTACTCACAGCACAGGAAGATCCACACGGGGGAGCGTCCCTACAAGTGTGACGTCTGCCACATCTCGTTCCGACGATCTCACGTACTAACTGTCCACAAGCGAATACACACCGGTGAGAAACCAAACATTTGTGATATATGCGGCAAATCATACAGACAGAAGGGTGACATGTTGAAACACAAACGTATTCAACACGGCTATATTCATCGGAGTAAACAGAGTCAgatgttttattaa
Protein Sequence: MKLKLKNTSGESVTLIIKPEDTFIDLRERVAEELGLRLDLSDIVNGEHYLETQRVLDFFSQLPNGDDSSYVSNDETIHFDCIVPGCNKKKSTHPHLSFFEFPQEELRNHQWALYCQRLLGQSGKKRLNITSSSRICSDHFRPEHFVKNAGTILKRTAVPCINPEVAPTQSVIHTESPDISYVANHSVFDKIVKKRPVCRLCAKFTDNSIYLFDETSHPLTLAQKINSCLPINVDMSGSLPKQICTDCFISVEKLFKFSESCIETHTELKNKASEQQLGESIIARSDEAEDKPGLVLSCDFTQELITSSCCSGTDCSLCGDGKLTLTSLAFPDRVPLPLSDPVISVKSINSINETFSPPTKIKEEKLNDSWEAADNAFNYYCNRCSADFKSFSDLLPHSLMHSEDGNYVCVLCDFVGERKTDLTSHFKTHDVEPAIYQCDNCGIGFRSLSLFEIHNCITNNCSLNRCNVCHKTFRSESRLEFHKKFHDSDNKPGQCEYCPKSFSDEMKLYKHVTYLHSDKKSNKNISCEECGKSFRSLSSLKYHLRVHLGEPLSVRPFSCDICSKSFSRRSMLRNHISVFHKTLSQETDCFMCGLCYEIFPFSDSACFHLEKAHPLNSEATYQSINSKVLVCEFCKRCFPSSTYINNHRSRHKNDTPYECKHCGYEFETDKQMESHVQSEHTEAVSKEYLCEFNMPPLYSCEYCDRDFISLVKYTEHQTIHYGNTPYMCRLCDLKFPSLEDCYSHKLTQHPEESDSNKTNYYRPFDCHYCNKSFAIEDALVKHIRMHTGEKPFICDVCGKAFSQSSGLYTHQKVHSTDRPYSCTLCPRKFKIKGDRDIHVRKHSGERPYKCEFCGKAFMTQHVYSQHRKIHTGERPYKCDVCHISFRRSHVLTVHKRIHTGEKPNICDICGKSYRQKGDMLKHKRIQHGYIHRSKQSQMFY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01009580;
90% Identity: iTF_01009580;
80% Identity: iTF_01009580;