Basic Information

Insect: Microvelia longipes
Gene Symbol: -
Assembly: GCA_018340805.1
Location: JACMZG010001863.1:43122647-43128784[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.1e-05 0.0038 18.7 0.8 1 23 700 722 700 722 0.96

2 14 0.0034 0.41 12.3 0.1 3 23 742 763 740 763 0.95

3 14 1.2e-05 0.0015 20.0 0.7 1 23 789 811 789 811 0.97

4 14 2.3e-05 0.0029 19.1 0.9 2 23 818 839 817 839 0.94

5 14 9.3e-05 0.011 17.2 5.4 1 23 845 867 845 867 0.98

6 14 1.3e-06 0.00016 23.0 2.4 1 23 873 895 873 895 0.97

7 14 1.6e-05 0.0019 19.6 0.0 1 23 901 923 901 923 0.97

8 14 5.7e-05 0.0069 17.9 4.7 1 23 935 957 935 957 0.97

9 14 4.8e-08 5.9e-06 27.5 0.8 1 23 963 985 963 985 0.99

10 14 0.043 5.2 8.8 0.7 1 23 991 1014 991 1014 0.93

11 14 0.0018 0.22 13.1 0.1 1 23 1025 1047 1025 1047 0.98

12 14 0.00032 0.039 15.5 1.4 1 23 1053 1075 1053 1075 0.97

13 14 5.5e-06 0.00067 21.1 2.0 1 23 1081 1103 1081 1103 0.98

14 14 0.0049 0.6 11.8 5.3 1 23 1109 1131 1109 1131 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.1e-05	0.0038	18.7	0.8	1	23	700	722	700	722	0.96
2	14	0.0034	0.41	12.3	0.1	3	23	742	763	740	763	0.95
3	14	1.2e-05	0.0015	20.0	0.7	1	23	789	811	789	811	0.97
4	14	2.3e-05	0.0029	19.1	0.9	2	23	818	839	817	839	0.94
5	14	9.3e-05	0.011	17.2	5.4	1	23	845	867	845	867	0.98
6	14	1.3e-06	0.00016	23.0	2.4	1	23	873	895	873	895	0.97
7	14	1.6e-05	0.0019	19.6	0.0	1	23	901	923	901	923	0.97
8	14	5.7e-05	0.0069	17.9	4.7	1	23	935	957	935	957	0.97
9	14	4.8e-08	5.9e-06	27.5	0.8	1	23	963	985	963	985	0.99
10	14	0.043	5.2	8.8	0.7	1	23	991	1014	991	1014	0.93
11	14	0.0018	0.22	13.1	0.1	1	23	1025	1047	1025	1047	0.98
12	14	0.00032	0.039	15.5	1.4	1	23	1053	1075	1053	1075	0.97
13	14	5.5e-06	0.00067	21.1	2.0	1	23	1081	1103	1081	1103	0.98
14	14	0.0049	0.6	11.8	5.3	1	23	1109	1131	1109	1131	0.95

Sequence Information

Coding Sequence: atggactgtaGATTGgGGGCTGATCTTGGTAGTGAAAACTATGTTGGTGGAAGGATAGCATGGAATCCTTCACTAGCTGAATCAACGTTGGGACACTTAGAAAActcatcaaattttttaaatgatgatAGGAATATTCTGATCGATTACACAACTAAATCTGCCTCCcctgaatatatttttcctacTCAATATCAGGATAAAACACAAGAATCTTGTAATGGGCATCAGGGCAGCATGGTTATTAAATATAGGGATAAAACTCTGTCTTCTGCGgataattcaaatattaaaccTAATCTAAGAAACGTTGAAAATGAAAGAGTATCTTCCATATTTTCTAGAGTAAATTCCGATCAAACTCAAACCTTATTTTATAGTGGTAATGATAAAACTCAATACAAAGAGAAAGCTGAATCTTTTCATCAATATGAACATTTTGAACCAAATCTAAATCACTTAAGAGGAGTTGATTCAAACATTATGAATAGAGATTTAGATCAAGTCCAAAGGAAAATATGTTATGAAAACTCTGTCAATGAATCTAAAAAGGAATTGTTTTCATcaagaattaaattattgagttctgaattatctttaaataattcttctACTAGTGTTgtaaaactaaatgaaactaATCACATTTCTCCTCAAATATCCAAATCACATTGtatgaaacaaaattatagGCATTCTTCCGCTCATAGTGAAGATGAGTCCGAGTTATTGCATAGTATggatgtttataaatttaaatataagactgattataatgatattaataCCGTTCTTAATTCTAGAGAATTCCAGAAATACCACCCATTACCTATTCATCAGAATAGTTCAAAAATTGTGTCACCAATTGTGCACACAGATCAAGTTCAATTTAGAGCAGAAAACTCAATAATAGTCAATCAAAATAATTGTGACATTGCCCAATCTACAATGCCATCAAAGAGTAACTTAAATGAATGTGCACCTTACATTCTAGCTCAAAAAAATTTACTGATAAGAAATGGTTTGAACCAAGATCAGAGATTAGCAGAAGACACTTTTCGTATTTCTGACAGTAATCATTCTGGTGAATCCTCTTCTCAATGGACTGACCCTGATTCTGTTATGTATAATATACCTCTGCAATGTCTAACTTCTCAGGAAAGTATGAGGTTAAAAAATGAGTTGTCATCTTACATTTCTCAGAAGCAATTTCCATTAAGGTCTTCCCATGTTAGCATTAATGAAGAAGAGCagttaaaaaattcagaaaaggAAATCACACCTTCGTTTGATCCATCCAAGGAGCTGGGTAGACATTCCGAGGGCTTGACTCATACTGAGGAGTTGAGTCCCATAGTTATGTCTTCCAATATACGAGAATACCAGGAACCAAGATTACATGTGAACGAAAATGACTTAAACAGCTATGATATAGAAGAGTCAAAAAGAAGGCAGTTATTGTCAGTTGTTCAGTTAAATTTACCTTTGAAAAATGTTCCAACACTTCTAGAAACGGCTTTAAAAGGGTTTTCTAGTGAAAGCCAAGATGTCAACAATTTGATTTCTTCCATGCCTCATAGAACTATTATACATTCTACTAGTCAAAATCCTTCTCATTCATTCCTAGGGAGTGTGAAGCAAAAGAATTTCTCTATTGAAGATTACAGGCAGTTGCTTCCTGAAGAGGCTCAACTGGAACCGTTAGCTCATCAGCAGGAGGATATGCAAGTATTAGACTTCAGACTGAGAGATAATGAATCTTCGTCCTCTCATGATACCTCCGCCgatgcttgtcctcaaaatttGACTTTTCATTCAGTTTTTAAACATGAGGAAGACAGATCTAatctgaaaaataattctggtaccAGCTTAGAGTCAGCTAACACTAAACAAAATCATATGTCAGTAATTTCTTTggTTAGAGGAGATTGCAAAGTTTGCAATACTTGTAGAAAGTTCTACCAAGATCATGGTTATCTGAACGAGGACGAAGCCTGCATGTTGTGCTTGTATCATGCTGAAAATGAAATGCAGTGTGTTTGCCATGACTCCGTTATCAAGTATGAGACTTGCACCTGTCATATTACTAAGCATTACCTCTGCAGTTACTGTGATGAAGTTTTCTCTTCCATATCTCTCCTTCAGAAACACACTTTCACACACATCTCTGAGGAAGGGGCAGTAATCAATATGCAAACACTCCCATCTGAATCTATTAATTGTCCTATTTGCCCCActtctttcttaaatttaaaatccttaGAAAATCATATATTATCAACTCACCAGGAAAAATTCTGTGGCATGTGCAAACAAATATTCCAACTATTCAATCCCTCGCGTCACAGCTGTGATGCCAAGTATATCTGTAGTTTATGTGGTGCTAGTTTTTCTAatcagtataatttaaaaatgcattctTTAAAACATTCTGGAAACCTTCCCTGTGAGTGCCAAGAATGTGATAAATCTTTTGCTAAACCTTCAGAGTTATTAAAGCACAGCTTAGTACACAGTGGAGAAAAACCTTTTTCTTGTGATAAATGCAACATGTGTTTCTCCAATTCTCAAAATTTACGTAGTCATAAATCCACTCATTCGGGTGCTAAACCTCATCCTTGCAAGATTTGCCACAAAACATTTACTCGCCCTGCAGATGTTAGGAGGCACATGTTGATTCATTCTGGTGAAAGACCTTATGCTTGCGAAATTTGTGGCTTAGCATTTGCCGACGCTTCGAATATGAAGAAACATGTTGTTACTCATTCTAAACCTTTACAGACCTGTGATATTAAAACTTATCACTGTACTTATTGTTCTAAAGTCTTTATGAGACCCTCAGAGTTAAAAAGGCATTTCTTTACCCACACCAAGACTAGGCCCTATTCCTGTCATGTTTGTGGTTTAGCTTTTGCTGATTCCTCTAATCTAAAGAAACATATTCAAACACATGAAAAGGCATCACAGCATGTATGCGTGCAATGTGAGTCTTCATTTAAATCCTTTGAAGAACTGGAATTGCACATTACTTTATCTCATAGTTCAAAAAATTATGATCCCAATAAAGGTTATGTCTGTGTGTCTTGTAATGCTATATTTACTCAACTTATAGACCTACAAGACCATCAACTGACTCATGGACCCACTCCTTCACATCCGTGTGATATATGTTCGAAAACCTttagtgaaaaaatatttttagatcgACATCTTCTAACTCATACGGAATCCCGCCCCTATGTTTGTGATGAATGCttcaaaagtttcaaatctctttcTCACTTAAGATCTCATGTACTTATTCACTCTGGTGTAAAAACCCATGTGTGTCATGTTTGTGATAAATCCTTCTTAAAGAAATCATCCTTACTCCGTCATCACGGTGTCCATTCGAAAGAAAAACAACTTAATAATAGCCAAAACATTGCTGACCCTGGCCAGGTATGA
Protein Sequence: MDCRLGADLGSENYVGGRIAWNPSLAESTLGHLENSSNFLNDDRNILIDYTTKSASPEYIFPTQYQDKTQESCNGHQGSMVIKYRDKTLSSADNSNIKPNLRNVENERVSSIFSRVNSDQTQTLFYSGNDKTQYKEKAESFHQYEHFEPNLNHLRGVDSNIMNRDLDQVQRKICYENSVNESKKELFSSRIKLLSSELSLNNSSTSVVKLNETNHISPQISKSHCMKQNYRHSSAHSEDESELLHSMDVYKFKYKTDYNDINTVLNSREFQKYHPLPIHQNSSKIVSPIVHTDQVQFRAENSIIVNQNNCDIAQSTMPSKSNLNECAPYILAQKNLLIRNGLNQDQRLAEDTFRISDSNHSGESSSQWTDPDSVMYNIPLQCLTSQESMRLKNELSSYISQKQFPLRSSHVSINEEEQLKNSEKEITPSFDPSKELGRHSEGLTHTEELSPIVMSSNIREYQEPRLHVNENDLNSYDIEESKRRQLLSVVQLNLPLKNVPTLLETALKGFSSESQDVNNLISSMPHRTIIHSTSQNPSHSFLGSVKQKNFSIEDYRQLLPEEAQLEPLAHQQEDMQVLDFRLRDNESSSSHDTSADACPQNLTFHSVFKHEEDRSNLKNNSGTSLESANTKQNHMSVISLVRGDCKVCNTCRKFYQDHGYLNEDEACMLCLYHAENEMQCVCHDSVIKYETCTCHITKHYLCSYCDEVFSSISLLQKHTFTHISEEGAVINMQTLPSESINCPICPTSFLNLKSLENHILSTHQEKFCGMCKQIFQLFNPSRHSCDAKYICSLCGASFSNQYNLKMHSLKHSGNLPCECQECDKSFAKPSELLKHSLVHSGEKPFSCDKCNMCFSNSQNLRSHKSTHSGAKPHPCKICHKTFTRPADVRRHMLIHSGERPYACEICGLAFADASNMKKHVVTHSKPLQTCDIKTYHCTYCSKVFMRPSELKRHFFTHTKTRPYSCHVCGLAFADSSNLKKHIQTHEKASQHVCVQCESSFKSFEELELHITLSHSSKNYDPNKGYVCVSCNAIFTQLIDLQDHQLTHGPTPSHPCDICSKTFSEKIFLDRHLLTHTESRPYVCDECFKSFKSLSHLRSHVLIHSGVKTHVCHVCDKSFLKKSSLLRHHGVHSKEKQLNNSQNIADPGQV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -