Basic Information

Gene Symbol
Cdc5l_1
Assembly
GCA_018340805.1
Location
JACMZG010000008.1:64372816-64388387[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.2e-17 2.6e-13 50.9 1.5 2 46 9 54 8 54 0.97
2 2 1e-11 2.9e-08 34.8 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCGAGGGTAATGATAAAAGGTGGAGTCTGGAGGAACACGGAGGATGAAATCTTGAAAGCAGCTGTTATGAAATATGGAAAGAACCAATGGTCTCGTATAGCATCTTTACTGCATCGTAAATCAGCCAAACAATGCAAAGCTCGTTGGTTTGAATGGTTGGATCCTAGCATTAAAAAGACTGAATGGAGCAGAGAAGAAGATGAAAAACTTCTGCACCTTGCCAAATTAATGCCCACACAGTGGAGAACCGTGGCACCTATCATTGGACGTACAGCTGCTCAGTGCCTTGAAAGATATGAATACCTACTTGACCAGGCTCAAAAGAAAGAAGAGGGGGAAGATGGTGGAGAAGATCCAAGGAAACTTAAGCCTGGAGAGATTGATCCAAATCCAGAAACCAAGCCTGCTCGTCCTGATCCAAAAGATATGGACGAAGATGaGTTGGAAATGCTTAGTGAAGCTAGAGCAAGACTCGCAAATACTCAGGGTAAAAAAGCTAAAAGGAAAGCACGAGAGAAACAGTTAGAAGAAGCTAGACGTTTAGCTGCATTACAGaaaaGGAGAGAGTTAAGAGCTGCTGGAATCGAGTATGCTACCAAAGTAAGGAAAAAGAGAGGAATTGACTACAATGCTGAGATTCCATTTGAGAAGAAGCCATCTGCTGGGTTTTATGATACGTCGAATGAACATGTTGAGTCTACTGGTAGAGATTTCTCAAGACTTCGACAGCAGGAATTAGATGGAGAGTTAAGGAGTgaaagagaagagagagagcgtagaaaagataaacaaaaactaaaacagaAAAAGGATACTGATATTCCACAGGCTCTGCTGAACAACGAGGAGCCAGTcaaaaaaagaagtaaactTGTGCTTCCTCAGCCTCAAATTTCTGACCAGGAACTAGAAGAAGTAGTTAAGGTTGGTCGAGGCAGTCAAGCTGCTAGAGAAGCTGTTAGTGGGGGAGATGATGCTTTATTACAAGATTATTCTTTAGCCACTCCTCACGCTTCTGCAACCCCTCGTACACCAGCTCCTACCACTGATAGGATTATACAAGAAGCTCAAAATATAATGGCTCTTAGTCATGTAGATACTCCATTAAAGGGAGGCTTAAATACACCTCTATATGTACCAGAGACTCAAGCAGAACAAATAGCTACTCCAAATACTGTACTTACTACTCCTTTCTCTACAAGAACAAATCAAAATGGGATTATGACACCTCATGAGGGAAGTAAAAGCATGACTACTCCCACACCTGTCAGagataaacttaacattaaccCAGAAGAAGGACAGGTGGGAATGGCCACTCCTGCAGCTCTAAAGATGTACCAAAATCAGgtaAAAGAAGATCTCAGAGCAGGATTAAGAAATTTGCCTCAACCGAGAAATGATTATGAAATAGTTGTTCCTGAGGAAGAAAGGGATACAGGAGATGCTGACGATTTCTCTCAGAATAATTTAATGGATCAAGCTGATATTGATGCCCAGGCTATTGCTGCTGCTGCCgctaaaaGAGAACAAGAAATGAAGCTAAGATCTCAAGTAATACAAAGAGGTTTGCCGAGACCAGctgatgttaatattattctGAGACCACTTAATTCAGATCCACCTCTAACATCTTTACAAAGGGCGGAAGAGcttattaagcaagaaatgataACAATGCTCCACTATGATGCTATACATAGTGGAGAGCCTGTATTGCCAGGCAAGAAAACCGGACCAAACACTCAAGCAGCTCACTTGGCTTATTTAGAGCAGCATCCTTACCACCATTACTCTCAACATGATATAGACCAGgcCAAAGAATTATTGAAAGCTGAAATGGAAGTGGTCAAGCAAGGCATGAATCATGGTGAAATTTCATTGGAGACATTTACTCAAGTATGGGAAGAATGTCTTGCTCAGGTACTATATTTACCAAATCAAGGAAGATACACTAGAGCTAGAGCTAACCTGGTTAGTAAAAAAGACAGATTGGAAGCCGCTGAGAAACGTCTCGAGCAAAATAGAACACATATGACAAGAGAGGCCAAGAGAGCAGCTAAAATggaaagaaaacttaaaattattactggTGGATACCagaaTCGATCACAAACTCTGATAaaacaatttcaagatttagtTGATCAGCAAGATCAAGCTAGGATGGAACTCTCTACTTTTAGTGTTCTTCAGCAACAAGAAGATACTGCTATTCCTCGTAGGATACAGATGCTGACTGAAGAAGTTAATAGACAAGTTGAAAGAGAACGAGCCCTTCAAAAAAGATTTAGTGAATTAAAACTTGAATTAGATGCTCAACAACTAAATGAGAAGCTAACTGCTGTAGAATCTTtaggttaa
Protein Sequence
MPRVMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTVAPIIGRTAAQCLERYEYLLDQAQKKEEGEDGGEDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEYATKVRKKRGIDYNAEIPFEKKPSAGFYDTSNEHVESTGRDFSRLRQQELDGELRSEREERERRKDKQKLKQKKDTDIPQALLNNEEPVKKRSKLVLPQPQISDQELEEVVKVGRGSQAAREAVSGGDDALLQDYSLATPHASATPRTPAPTTDRIIQEAQNIMALSHVDTPLKGGLNTPLYVPETQAEQIATPNTVLTTPFSTRTNQNGIMTPHEGSKSMTTPTPVRDKLNINPEEGQVGMATPAALKMYQNQVKEDLRAGLRNLPQPRNDYEIVVPEEERDTGDADDFSQNNLMDQADIDAQAIAAAAAKREQEMKLRSQVIQRGLPRPADVNIILRPLNSDPPLTSLQRAEELIKQEMITMLHYDAIHSGEPVLPGKKTGPNTQAAHLAYLEQHPYHHYSQHDIDQAKELLKAEMEVVKQGMNHGEISLETFTQVWEECLAQVLYLPNQGRYTRARANLVSKKDRLEAAEKRLEQNRTHMTREAKRAAKMERKLKIITGGYQNRSQTLIKQFQDLVDQQDQARMELSTFSVLQQQEDTAIPRRIQMLTEEVNRQVERERALQKRFSELKLELDAQQLNEKLTAVESLG*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00743676; iTF_00742729;
90% Identity
-
80% Identity
-