Mlon001764.2
Basic Information
- Insect
- Microvelia longipes
- Gene Symbol
- -
- Assembly
- GCA_018340805.1
- Location
- JACMZG010000002.1:31533131-31541478[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-07 0.0026 18.5 0.0 18 38 48 68 37 72 0.78 2 2 8.8e-09 2.9e-05 24.8 0.0 3 39 259 294 257 299 0.83
Sequence Information
- Coding Sequence
- ATGGTTGGTAAGGAATCACCGGATCAGGATTCGGACAGAGTGGATATGAACTTTAACGAATTTCAAACTAGCGCTACCACTAAATGGAGAAGAGATGAACGAATCTATAAATTAGCTACTCAGGACTTGTTATCCGGTGAATCTCTTATCGCTGCTGCCACTAAATATAACATACCACGTAGTACACTAcacgattatttaaaaaaatcaggtttaATACCAGCTTGGAGAAAAAGTCGACAAGCTGCTACTATAATGAAAAATCGAAATAATGCTTTGGCTAAatcgattaataaaataacagaaaaacgTCCCGAAATTCAAATAAGCCGCAGAAAAAGATCTCGAGTTAATCCTTTAGACATTTTTATGTCTTTAAACACTCTTTGGACTGATCCATCACTTGTGGATTCTAACTCTGTTAGTTCTGAAATCTATGAAAATCATCGTTTATCACAAGCTATAGCTGAAAGTCAGGCTCAATTGCCCCAGTCTGATAATCAATCTTTACCCCAAGCTATGGTCGAAAATCAATCTTATTTACCACAGAGTATTGGAAAAAGTTTACAGCAAACTGATAAACAAGCACAAAATAGTCCTGGTTGTCAATCTTCTGAAGAAACTAATTTTGaccttgttaaaataaaatATGGTGGTCCATGGCATTTGAATAACGGATATCCAAACGTGATACTAACGGAGCAGAATTACAGCAGTTCTCCCAGTCCAAGCAGTGAAACACCAGGTAAAGTTTCCAGGATACGTAGATCAGATGCTGAACTACTCAGCGCTGCGGATCAGATCTGTAAGGGTATGACGTTTCAGAAAGCCTCGCAAGTCTTCAATATCCCCATGAGCACCATCAGGTTCTATATGGCTAGAAAAGGAATGTTACCGAGCAGAAGGAGAGGACGGAGGATATCACAAAGTCCCATGGAGATGGGACAAAGCCCGGCTAGTATGGGATCTAGTATGGGAAGCCCCGGGAGTATGGGTAGTGGTAGTATGGGAACTAGTCTAGGTGGCTCTCCGAGTAGTGGACTCCCTGGTAGTTCGAGTAGTTTTAATATGTCCAATACTAATAGTACGGGATTAAGTTTGCCTCACCAAACACCTAGCTTACCTCATAGTTCCTTGCCCCACCAGTCATCACATAGTTCTAGTTCCTCTGTTCTACCAGATCCTTTCTACTGA
- Protein Sequence
- MVGKESPDQDSDRVDMNFNEFQTSATTKWRRDERIYKLATQDLLSGESLIAAATKYNIPRSTLHDYLKKSGLIPAWRKSRQAATIMKNRNNALAKSINKITEKRPEIQISRRKRSRVNPLDIFMSLNTLWTDPSLVDSNSVSSEIYENHRLSQAIAESQAQLPQSDNQSLPQAMVENQSYLPQSIGKSLQQTDKQAQNSPGCQSSEETNFDLVKIKYGGPWHLNNGYPNVILTEQNYSSSPSPSSETPGKVSRIRRSDAELLSAADQICKGMTFQKASQVFNIPMSTIRFYMARKGMLPSRRRGRRISQSPMEMGQSPASMGSSMGSPGSMGSGSMGTSLGGSPSSGLPGSSSSFNMSNTNSTGLSLPHQTPSLPHSSLPHQSSHSSSSSVLPDPFY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -