Mlon011506.1
Basic Information
- Insect
- Microvelia longipes
- Gene Symbol
- lov
- Assembly
- GCA_018340805.1
- Location
- JACMZG010000022.1:42361795-42377893[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-18 6e-15 55.8 0.0 1 44 399 442 399 443 0.96
Sequence Information
- Coding Sequence
- ATGAGCAACCCCCACTACAGTCTGCGCTGGAACAATCACCAGAGTCATCTACTGACAGCATTCGATTCTCTATTACAAAATGAAACATTGGTCGACGTGACGTTAGTTTGTGAGGAATCATCTTTCAAAGCTCATAAAGTAGTCCTTTCAGCATGCAGTCCTTATTTCCAGAGGATATTCAGCGAAACGCCATGCAAACATCCtgtgattgtgttaaaagatcTCAAAGGTTGGGAAGTTCAAGCAATAGTAGACTTTATGTACAGAGGAGAAATAAGTGTGGGGCAAGAGCAATTGCCGACTCTCATCAAGGCAGCCGAGTCACTACAGGTTCGAGGATTGGCACATACGGAGCGAATCCCTGTAGGCGAAAAAGATAATCTAAGCAGTAGAGAATCCGAACAATCACGCGAAAGAGATCGAGAAAGAGAACGAAGTTATAGTCCAAGCTTTACACCCTCTGAAGAAGCTCATTCACCTAAATACGAACCCTTCAGTTCGAGACCACCAAATAGTTCTCAACCTTTACCATTTAACGGACCTCAGGATAGGCAATGTACCTCACCTATACCAAGAAGGAAACAGGCGAGACCTAGAAGACGATCGGGAGACTGCGGAGCACAAGATCTATCTCGTAAAGTCGGAGGTGGTAATTTTTACAACGGTCCAAGCCCTGAAGTAGCTGATTTATCGCTTAGAAAATCTCAGCAACCTCAGCAATCTCCACAACCTCCTGCCTCTTTACCTCCACAAACCCAGATCTTTAAATCTTCACCGACACCACCGAACAACAACAATAACAATGTGGAAAGTGAAGAATCAAATGGAGAAGGAGTGCAAAATCAACCTGTGGAACTGACTGTGAACCATCAGGATCCACCACCGCGCTTAGACTTCCTTGAGCCTCCAATTCCTCTACCTCACCATCAAGAAGCATCGCTGGAGAATGCGTTCCCTCCACATCTGGCTTCCATATCTCAACTCTCTCTAACACCACCACATATGTTTTCACTCGAGTCAAGTTTAGGACTTTTTCCTGGTTTAGAAAATTGCAGGGGAGGATTACTCGGCGATCTATCAGATCAACGAATGGATAATCATCATATGCCTGTCAAAAAGAAGAGACGCTGCTTTGTGGTAGGAAGGCCGAAAGGACAGCATTCAGCACCTAGAGGAGGTCCTCCTAGATCCTGGACAAATGCGGAGCTGACAGAGGCTCTACAGCATGTCTGGAACAAGAAGATGACCACCTCTCAGGCCTCTAGGATATTTGGCATACCATACAACAGTCTCCTCATGTACGTCAGAGGAAAGTATGGCAAATCTCTTAAATTGGAACAACTTAAGAAAGAGTGCTTTGGAGATGTCAATGGTCCCCTAGATCTACTAGGATTGggtaatatttcaaataataataatccgactCCAAAATCACATAAAATACCTGAACCTGATCTGATGCTGGGTCCACCTGGCTTCAACCCAGGAGGGGGATACCCCGGCAACTTCTATCCAGATTTCAGCTCATCGTTCCCAGTCCCAGTTGGAATGGTTCATTTGCTTCCTCAGTCAGAGAAGAACAGAGAGCCGATGAACATGTCATTGGATTTTTCGACAAAAGATGATCGCGGCCCTTTAGACTTTGGCAAAGATGATCGAACATCTGCTTTGGATTTCGGTAAAGAGGATCGTAATCAGATCGATTTCAATTCTAAAGACGTACGATCTCCTTCTTCTGTACCACTAGATTATGTTAAAGAAGAACATCATAACAATTTAGATTCTGATGAACCTAAAATTTCCCTGACTCAACATAACGGTGATTGA
- Protein Sequence
- MSNPHYSLRWNNHQSHLLTAFDSLLQNETLVDVTLVCEESSFKAHKVVLSACSPYFQRIFSETPCKHPVIVLKDLKGWEVQAIVDFMYRGEISVGQEQLPTLIKAAESLQVRGLAHTERIPVGEKDNLSSRESEQSRERDRERERSYSPSFTPSEEAHSPKYEPFSSRPPNSSQPLPFNGPQDRQCTSPIPRRKQARPRRRSGDCGAQDLSRKVGGGNFYNGPSPEVADLSLRKSQQPQQSPQPPASLPPQTQIFKSSPTPPNNNNNNVESEESNGEGVQNQPVELTVNHQDPPPRLDFLEPPIPLPHHQEASLENAFPPHLASISQLSLTPPHMFSLESSLGLFPGLENCRGGLLGDLSDQRMDNHHMPVKKKRRCFVVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKECFGDVNGPLDLLGLGNISNNNNPTPKSHKIPEPDLMLGPPGFNPGGGYPGNFYPDFSSSFPVPVGMVHLLPQSEKNREPMNMSLDFSTKDDRGPLDFGKDDRTSALDFGKEDRNQIDFNSKDVRSPSSVPLDYVKEEHHNNLDSDEPKISLTQHNGD*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01009645; iTF_00742702; iTF_00743601; iTF_00743891; iTF_00742936;
- 90% Identity
- iTF_01009645;
- 80% Identity
- iTF_01009645;