Mlon014388.1
Basic Information
- Insect
- Microvelia longipes
- Gene Symbol
- bab1
- Assembly
- GCA_018340805.1
- Location
- JACMZG010001859.1:5638208-5672644[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.3e-13 1.4e-09 38.6 0.0 1 39 384 423 384 427 0.91 2 4 1e-12 3.5e-09 37.3 0.1 1 39 438 476 438 479 0.95 3 4 1.2e-15 3.9e-12 46.8 0.0 2 43 494 536 493 538 0.95 4 4 3.4e-15 1.1e-11 45.3 0.0 2 41 546 586 545 589 0.93
Sequence Information
- Coding Sequence
- ATGGGTAAACTCAGAGTTTGGACGCCAATCCAAATTTGTGAGAAGTTCAGAGTGAGAAGTTCAGAGAGAGCGTTGCCGACGTCGGCAGAAGAAGACGATATGAGTCAGCATTATTGCTTGAGATGGAATAATTATCAGTCGAACATGACGTCGGTTTTTCATCATTTACTCAGATCTCAGGCATTCGTTGATGTGACGCTTGCTTGCAACGAACAATCACTCAAAGCTCACAAGTGGGTTTATCAGATTGTTGATATacttgtttcaggtgttttatcaGCATGCTCTTCATACTTCCAGAAACTACTGATGGAAAACCCGTGCAAGCACCCGACTATCATCATGCCTCAGGACATTTGCTTTTCTGACCTCAAGTTCATTATCGAGTTTGTATACAGAGGCGAGATAGACGTTTCTCAAGCCGAATTAcagTCTCTACTTAAGACGGCAGACCAGTTGAAAATCAAAGGACTATGTGAAGTACCTGAGAAAGAATCAAGTCCTCCTCCCATGGCTGAAGTAATGCAGATAGGTTCCCCTCTGAGACATAAGCACCGCCCTCATAAGAGGAGGTTACATCAGCACTTTCCTGACTATCAGATAGGTAATGGGTGCATGGACGCAGCAACTAGCACGGATAGTGATATTAAGATGATAGACGATGAAACCCATGACCGAGATGAACCAATAGAGTTGAGACACACCATGACCTCACCCCCTCCTCACCTCTCTGCAACGCCAGAGCAGCATGAGCATAAGTATGAAAATGGACATGATGTGAGTGATAACGAGAGAGACATGGTACAGGATAGATGTATAGATTTAACTCCCTCAGATTTATCCACTAACAACCTACATAGACACGAACAGCAGCACCAAAACTTCAACGGTAAATATGaagGAGAAGAGCCGGTGAAAGTGAAATATGAAACTTTAAGGACTGTAGACCACAACGAAAATCTGGGACACAACTTGGACTCCACTAGTGATAGGGGTATTAGCTCGGATGTGAAAGAAGACCATAACTCGATGCAGACCATGATGATCACACCCGAACTGCTTGGACTGATACCAACTTCTCATACAGATGGAGGTGGAGGAAGTGATAGAGATCCAATGGAAGGATGCCCCAAACAGAGTAAAAATTGGACTCCAGAGGATATGGAAGCTGCATTGGAGGCCCTTAGAACCCAAACAATGAGTTTAACAAAAGCATCTCTACACTTTGGCATTCCTTCGACTACACTATGGCAGAGGGCTCATAGGCTCGGTATAGACACGCCCAAGAAAGACGGACCAGCCAAGTCATGGACCGAGGACTCTCTCAATGTGGCTCTTGATGCTCTCAGATCCGGCACCATATCTGCTAATAAAGCCAGCAAGGCTTACGGCATCCCGAGCAGTACACTGTATAAGATAGCTAGGAGGGAAGGCATCCGATTGGCTGCTCCTTTCAATGCTGCACCTACTACCTGGAACCCTGAGGACTTAGAGAGAGCACTGGAAGCCATCAGaTCTGGACACACAACGGTGCAACGGGCTGCTGCTGATTTTGGAATTCCATCTGGTACTCTGTATGGCAGGTGTAAACGGGAAGGCATCGGTCTCACTAGAAACAACCCTACTCCATGGTCTGAGCAAGCTATGAATGACGCTTTGGATGCTGTTAGGATCGGACAAATGAGTATAAACCAAGCTGCTATCAGTTTCAACCTGCCCTACTCCTCTCTCTACGGAAGATTCAAACGAGGTAAATTCGACACAAACGGAACAAACGGATCGAGCGACGAAGACCAACATTCGAACGGACCTCTTACAACAACCCAAGGTCAACAAACTGGCTCCAACAGTCCTGGGATCGTTCTCAATTCGCCGCAACCGCAAATCATGCTTGTTCAGTATCAACAGGCAAATCCACCAATACACATGTACACTCAGCCAGCCACATGA
- Protein Sequence
- MGKLRVWTPIQICEKFRVRSSERALPTSAEEDDMSQHYCLRWNNYQSNMTSVFHHLLRSQAFVDVTLACNEQSLKAHKWVYQIVDILVSGVLSACSSYFQKLLMENPCKHPTIIMPQDICFSDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPEKESSPPPMAEVMQIGSPLRHKHRPHKRRLHQHFPDYQIGNGCMDAATSTDSDIKMIDDETHDRDEPIELRHTMTSPPPHLSATPEQHEHKYENGHDVSDNERDMVQDRCIDLTPSDLSTNNLHRHEQQHQNFNGKYEGEEPVKVKYETLRTVDHNENLGHNLDSTSDRGISSDVKEDHNSMQTMMITPELLGLIPTSHTDGGGGSDRDPMEGCPKQSKNWTPEDMEAALEALRTQTMSLTKASLHFGIPSTTLWQRAHRLGIDTPKKDGPAKSWTEDSLNVALDALRSGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWNPEDLERALEAIRSGHTTVQRAAADFGIPSGTLYGRCKREGIGLTRNNPTPWSEQAMNDALDAVRIGQMSINQAAISFNLPYSSLYGRFKRGKFDTNGTNGSSDEDQHSNGPLTTTQGQQTGSNSPGIVLNSPQPQIMLVQYQQANPPIHMYTQPAT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01009679;
- 90% Identity
- iTF_01009679;
- 80% Identity
- iTF_01009679;