Basic Information

Gene Symbol
ct
Assembly
GCA_018340805.1
Location
JACMZG010001893.1:19655685-19685249[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-27 2.7e-23 82.9 0.0 3 72 398 468 396 473 0.95
2 3 1.5e-31 3e-27 95.5 0.1 3 77 753 828 751 830 0.96
3 3 1.7e-31 3.4e-27 95.4 0.0 3 75 936 1009 934 1013 0.96

Sequence Information

Coding Sequence
ATGAGGAGGAGTGAGGAAGAGATGAGGAGGAGTGAGGAAGAGATGAGGAGGAGTGAGGAAGAGATGAGGAGGAGTGAGGAAGAGATGAGGAAGGAAACTAAATGGTTTCTGTTATTAAGAGTTATTAAGGAAATAATTCGTATTAATAACGCAAGGTTCTGGGTTTCACAGTATAATAGGGGTATTCACAGCTTCTTTTGTTCTAAGCGAGCAACGCTGGCCGAGAAGGAAGTAAATGCTCTGAAAGAGCAGCTAGCAGGGTCAAATCAAAGTTCGGTTTCATCAGAAATGGCCCAGCAGCCCGAACAGATACAAAGAAGTACACTCGAAATTGAGCTCTCAGCCAAGGATAAAGAAaTATCTCAATTAGTTGAAGATGTTCAAAGATTACAAAGTAGCATGGCTAAATTGCAAGAGAATTCAGCGAAACAAATATCAAGATTAGAAGATGAGTTGGAAAATAAAAGACAACATATTCTAAGGCTTGAAGCAAAATTAGAAACTCAAAAAGACTATAATGATCTTAAACGAATATTTAGTTCAATTAAAGCGAATGAAGAAAGTAAGTTGGAGGAAAGTGAGAAAAAAGAAATCGCTAAGTCTGAAAGTCCAGCAAGCACACCATCACAGATTCCaaGTGATGTAAGTACCCTTCACAACGTGGAAACCTTTGGTTCTCTTCTTGGCGAAGAAATAGTGGCTAACTGGAGGCGATCACTGGAAAGAACCATTGTATCGCAAAGTTCACGTCCGACCCCTCCTCCTTATTCGTCTTGGAATGAGGAATCTGGTAAAGTAAAGGCAGACAGTGTCGAAAGAGAAGGTAGATCTGTTTCACCAAGTGGAGACGATCGTGACTTAGTAAACGGGGAAGATTCGCCTGGAGAACCTACTGATtcagaaactaataataataacaatagctGTACAACTAGTAATAATAATCTCGCTAACGGTCTATGTCCAAGCTCATTTGGAGTTGGTATCAATAACAACCTGTTAGGATCTAGCGTTTCTCTGGCAGAAGCAATCAAAAGTCCGTTTCGCTTTGATGACCGATCTCCTTTCAGGTACGGTGACGAACCTGGATGCATGGTCGGAAGATTTGGCGAATCGCTGATACCTAAAGGAGATCCAATGGAAGCCAAATTACAGGAAATGCTCAGGTACAATATGGATAAATATGCCAATCAAAACTTGGACACACTCCACATAGCCAGACGTGTTAGAGAACTTTTATCCATTCATAATGTTGGTCAAAGATTATTTGCCAAATATGTTCTTGGACTATCGCAAGGTACAGTTTCTGAACTTCTTTCGAAACCCAAACCTTGGGATAAACTGACTGAAAAAGGCAGGGATTCATATCGCAAGATGCATGCATGGGCGTGTGATGAAAATGCAGTTTTACTTCTCAAATCTCTCATCCCCAAAAAAGgaAAAGAACCTGGAGTAGGAAATGTTCTTGGTGGAAGACCTGAAAGTGATATGACTGAAGAAAGAATAGCTCACATTTTAAATGAAGCCAGTAGTTATATCAAACCTCAGAGCAAAGGTGAAAGTCCGTCAAATGAAGACAGCAGATCTCCTAATCCTCCCAGgAGCTCTGAATCACCTGGTCTCCGAGATAGTCATGGTAGACGAATCAAAAAATACGAAAATGATGATATATCTCAAGAACAAGTTGTGAGAATATATCACGAAGAATTAGTGAAACTTATGGGAAGAAGGCTAGAAGATCAACCATTCCCTggGTTGATGTTTCCTCATTTTCTAAGTGCCGGTGCTGGTGCAGGAGAAGAAGTTCGACTAGCAATGGACGCATATCACAGAGAACTTGCCAAACTAAATTCAGCAGGAAGTTTACCATTTCCTCTTGCTGCAATGCACCAACAAGTTATGAGCAGCCACAACGGAATGGCTCAAGATCTTTCGATGCCAAAGACTGAAAGGAAAGAGAAGAGTATCAACGGCGACGAAAAGAAAGAAGATGAAAGACATGGTAGTGCTTTTTCTCTTGTGCGACCCAAAGTCGAACCAAGTTCTCCGCTTGGTAATGTAATTTTGCCTCCTGAAGATATGAGTTGTTCTCCCGCTGGATCTACAGCAGCCGCGGCTGTCAGTCCCTTGCAGAGAATGGCTTCGATAACAAATTCATTAATATCACAACCTCCAACCCAGCATCATCACACACCTTCACAAAGGCCTCTTAAAGCAGTCCTACCTCCCATCACACAACAGCAGTTTGACCAATTCAACAATCTTAATACAGAAGAAATTGTAAGAAAGgtCAAAGAACAACTAAGTCAATTTTCAATAAGCCAAAGATTATTTGGAGAATCCGTTTTGGGATTATCACAGGGAAGTGTTTCGGATTTACTTGCAAGGCCGAAACCTTGGCATATGCTGACACAGAAAGGAAGAGAACCTTTTATTCGCATGAAAATGTTCTTAGAAGATTCAAATGCTGTTCACAAACTTGTTGCTTCGCAGTATAAAATAGCTCCTGAGAAACTAATGCGCACTGGTGGATATGGTGTCAGTCCAAGTCCTCATACTAAGCCAGTATCAAGTAATTGTGGAAAGTACCCACCAGGAATTATGCATAATGCTCAAAGTATGCATGTAGCACACTCTAACTCTAACCCTCCGCCTCCACCGGTACCACCGCTAACTCCTCCAGATATGAAGAAATGTTCTGCCCCACCTCAGCATAACCAACAAATTCCTGTCCAGCAATTTCCTCCAATGAAGTCAATTCAACATTCTGCAGCCCCTTCAGTCTACGAAATGGCTGCTCTTACTCAAGAATTGGATACACAAGGCATCACAACTAAAATCAAGGAAGCTCTTCTTGCTAATAATATAGGTCAAAAGATATTTGGGGAAGCCGTTTTAGGTTTATCACAGGGATCTGTAAGTGAACTTCTGTCTAAACCAAAACCTTGGCACATGCTAAGTATTAAAGGAAGAGAGCCATTTATCAGAATGCAGTTATGGTTGTCCGATTCCCAAAATATTGATCGTCTTCAAGCTATAAAAACAGCGAAAAGAGAATTGAATAAAAGAAGGAGAGGATCTGGACAACAAGACAACAGCAGTGACACATCTTCAAATGATACTTCTGAATTTTATCAAAACAGTGCGAGTAGCCCACCTTCTTCTAAGAAACAACGAGTGCTCTTTTCAGAAGAGCAGAAGGAGGCTTTGAAAATCGCTTTTGCCCTGGATCCATACCCTAATGTTGCTACAATAGAATTTTTAGCTAATGAATTAAATCTTATATCAAGAGCAGTGTCCAACTGGTTTCATAACCACAGGATGAGGCTGAAGCAGCTGCCTCACGGTGAAGCACTCAACAGAGAAGGACAAAGCTGTGGATTTGATCCTGTCAAGTTTCGATTGTTACTTAGTCAAAGACTAGGTATCCAATCGCCCTTCCCCTCCCAATTCTTCCCGCCCTACGCAGGTGAAGGGGCTCTTTCGAATTTAAGTAGCCTCTTACAAGAACAACGAGAGGAAGTTTCGGGTCTGGACCTCACAGTTAAACACGATGATGATTTTGACGACAACGAAAGTCATTTAGACTCTGAAGATTCCTACTCGGGAGTTCCAGAAACTAGGCCTCCTGAACCAAGAAGTTCGCGGAGAAAACCCGCTGCTCCTCAATGGGTAAATCCTGATTGGCAGCAAGAGTCAGAAGTTATAATTAATGGTGTTTGTGTTATGAAGACTGAAGATTTTGAACGAGAAGAAAGAGAAGAAACTGTGAGGGTAGAACCTACTCCAGTACCTGAAGAGCAGTGTGGTTCTCCCGAACCTAATCCTGAATCGCCCTCTGACGAACCCAAGGTCCAcgttaaacaagaaaataaggACGAAAAATGGGACAGctcgttttaa
Protein Sequence
MRRSEEEMRRSEEEMRRSEEEMRRSEEEMRKETKWFLLLRVIKEIIRINNARFWVSQYNRGIHSFFCSKRATLAEKEVNALKEQLAGSNQSSVSSEMAQQPEQIQRSTLEIELSAKDKEISQLVEDVQRLQSSMAKLQENSAKQISRLEDELENKRQHILRLEAKLETQKDYNDLKRIFSSIKANEESKLEESEKKEIAKSESPASTPSQIPSDVSTLHNVETFGSLLGEEIVANWRRSLERTIVSQSSRPTPPPYSSWNEESGKVKADSVEREGRSVSPSGDDRDLVNGEDSPGEPTDSETNNNNNSCTTSNNNLANGLCPSSFGVGINNNLLGSSVSLAEAIKSPFRFDDRSPFRYGDEPGCMVGRFGESLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHIARRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVLLLKSLIPKKGKEPGVGNVLGGRPESDMTEERIAHILNEASSYIKPQSKGESPSNEDSRSPNPPRSSESPGLRDSHGRRIKKYENDDISQEQVVRIYHEELVKLMGRRLEDQPFPGLMFPHFLSAGAGAGEEVRLAMDAYHRELAKLNSAGSLPFPLAAMHQQVMSSHNGMAQDLSMPKTERKEKSINGDEKKEDERHGSAFSLVRPKVEPSSPLGNVILPPEDMSCSPAGSTAAAAVSPLQRMASITNSLISQPPTQHHHTPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDSNAVHKLVASQYKIAPEKLMRTGGYGVSPSPHTKPVSSNCGKYPPGIMHNAQSMHVAHSNSNPPPPPVPPLTPPDMKKCSAPPQHNQQIPVQQFPPMKSIQHSAAPSVYEMAALTQELDTQGITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSQNIDRLQAIKTAKRELNKRRRGSGQQDNSSDTSSNDTSEFYQNSASSPPSSKKQRVLFSEEQKEALKIAFALDPYPNVATIEFLANELNLISRAVSNWFHNHRMRLKQLPHGEALNREGQSCGFDPVKFRLLLSQRLGIQSPFPSQFFPPYAGEGALSNLSSLLQEQREEVSGLDLTVKHDDDFDDNESHLDSEDSYSGVPETRPPEPRSSRRKPAAPQWVNPDWQQESEVIINGVCVMKTEDFEREEREETVRVEPTPVPEEQCGSPEPNPESPSDEPKVHVKQENKDEKWDSSF*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00743479;
90% Identity
iTF_01009432;
80% Identity
iTF_01009432;