Basic Information

Gene Symbol
ARID4B
Assembly
GCA_018340805.1
Location
JACMZG010001914.1:15218520-15224276[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-25 6.5e-22 78.8 0.1 1 89 294 379 294 379 0.94
2 2 8.7 3.4e+04 -3.6 0.0 28 68 1135 1174 1125 1186 0.61

Sequence Information

Coding Sequence
atgatGGCCGATGATCCACCATATTTATCTGTGGGCACTGAAGTCAGTGCTAAATACAAAGGAGCTTTTTGTGAGGCCAAAATAAGAAATGTTGTGAAAACTGTAAAATGTAAAGTACTTTTCAAACAAGGGTTGGGTATGGTTACTGTGTTAGATGATGCTGTTAAGGGGATTATTAGGGTTGGTTCAATCGTAGAAGCTAAACACCCTGAGAGGAAAGAGTATGTAGAGGGCACTATTACCAAAATCCAAGATAGTAGCCAATATACCGTTGTTTTTGATGATGGAGATATTACTACTTTAAGAAGAACAGCTTTGTGTTTGAAGAGTGGGAGACACTTTGCAGAAAGTGAAACCTTAGACCAACTTCCTTTGACTCACCCGGAGCATTTTGGAAACCCAGTTATTGGAGGAAGAAGAGGTAGAAGGAGAGGAGGGGAAAGCAGTGATGAAGAGGAAGTTAGTCCTAAAGCTAAAGTACCGAAAGAGGAAAAAGAAGCCGATATCGGAAGAGTTGTTTGTGTTGAGGGTGACAAAAAGAAACAGAGAGATAATTGGTTTCCTGGTCTCGTGGTTGCTCCTACAGCTCAAGATACTGTAAGAATTCATGTCAGAGACGAATATTTAGTCAGGTCATTTAAAGATGGACGTTATTATACTGTACCTAAAAAAGAAACTACTGAATTCGCTAGAGAAGCTGGTGCTAAAGTTGATAATCACAGTGTGAAAGCTGCTGTTGAGAAAGCTGTTTTATTCTTAGATAAAGATGAGTTACCTCCTCACTGGGATAGAGATTCTCTATTTGGTCTGAATGAACCTTCAAATTATGAAAGTGATCATGATTCAGACTCAGATAACCCAGATGATGAACCTAGAGAAGAAAAAGATCATTTTGTTGCtcaactatataaatttatggaTGATAGGGGCACGCCTATTAATCAAGGCCCTACTATTTGCTCAAAAGATGTTGATTTATATCGTCTTTTTTATGTTGTTCATAAACTGGGAGGATATAACAGAGTAACTAACCATAATCATTGGAAAATTGTTTCACGGAAGTTAGGTTATGGACCCTCAATTGTCAATGTTAATTTAGTTAAACATGTTTACAAAAGATTTCTTCATAGCTTTGAAGAGTTTTATAGAAAACTGGGTTGTACAATGGTTAGTAACCCCAGAACATATAGAAACAACAGGAGAGCTGGTAGGAGTATTATTAGAGAAAAGGACAGACTTGCTGTCAAAGCTGACAAGGATAGAAGTGATGCAGATGAATCTGAGGAAGCAAGTGTTGCTGGCTCCCTGGGTACTCTTCAAGATGTCCAAGATATTAAAATGGAGTTAGATGAAACAATTCCAGAGCCTATTACACcttgcaaaattaaaattgaacctaAAGAAGAAcctgaaaaaaaagaaacaaagaagtcaatagaaaaagaaaaacccattcctaaaattaaagaggaaaagaaaaaagttaaagaggaagaggaaaagaaaaagttGAAAGAGGAGGAGGAAAAGAAAACtctaaaagaagaagaaactaAGAAAAAGcttaaagaagaagaaactaGAAAAAAGCTTAAAGAAGAAGAaaccaagaaaaaaataaaagaagaggaatctaagaaaaaattgaaagatGAGGAGgccaagaaaaaaattaaggaggaagaaaataaaaagaagatcaAAGAAGAAgaactaaaaaagaaattaaaagaagaagacttaaaaaagaaaattaaggaaGAAGAAGAATCAGATGATGATGCGAAAGCTAAAACAGAACCAAAAGAGAAGCCCAGAGTAAGGCAAACCAAAGTAAAATCAAACGAAACAACTCCTCCTACggttaaaaaagatataaagaaAGAAGTTGAAGATAAAGAAGACTCTAAGACTAACCCAGTTGAAAAGAAGAAGAGACTTTTTACTCGGGGACTGGTAAAAGAGAAAGAGAAATTAGGCCTTAACAAACCTGGATTGTCTCCTGGTTTGGCTGCTACTAGGCAAAAAAGAGCCATCAAAGACCGTGTCAAAGCTTTCGTAGATAGGGTCAAGAATCGTCTTACTAAAGACACATCTTCTGTTACTTCAGAGAGTAGTGATAAAAGTCAAAActctaataaagaaaaagttgtTAAAGACAAAAAGGAAGATAAAGAAACAGCTCCCACGCCTGCTGTCAAGAAGAAAGAAGAGCCTGTCAAAGAGGAACCAAAAGTTTTgtcagaagaaaagaaaaaagttggtaggaagaaaaaagaaaagaaagaatttGATGATTCTGAGTGTCAGCCTACGTATAAAACTGTGTGTGTCGGAGATaaacttaaagtttattatGGGCCCACGAATGAGTCAAAAGTTACATATGAGGCAAAAGTATTGAGTGTGAAGAATGATGGCCCTGAAGTTATGTATCTCGTACATTACACTGGCTGGAACAATAGATATGACGAATATATTAAGCATTCTAGGATAGCAGATAATTTGTCTTGGGTTCCTGGAAGATCTGGCAAAAAAGCAATGCTTTCGTTTTTGAAACCTAGTCGGAGGAAAAATAGCATTAGTAAACCGGAAACTTCTTGTGGTAAACCTGATGGTCCTCCTAATgctaaaactgaaaataaaggAGATGCTCCAAATGCTATTAGTGCCAAAGCTGACTCCCCTAATTCCAAAACTTCAAGTTCAATTGATTCGAGCCCTCAAGGTAAATCATCAAAATCCTTTACTGTAACTAGATCGTCCTCAagaaattctattaaaaaagaAGAGTCTTCAGCTGAAGTAGAGACTGAAGAGGAATCTGATTGTACTATTCCCAAACTTTATCTATCAGATGAATTATTAAGTGACAAAACTCCTAGTGAAAAGGTCAAAGAAATATTAGGTATTAGTGATGACAGCAGTTTAGTAAACATGCCTGAAAGGCGCAAAACAAAGAGAAGAATTGGAGGGGatgatttaactaaaaataagaaactgGATTCTAAAGGAAAAGAAGACTCTACCAGTAGGGATGAGTCTTCTCCCTCGCCTAAAATAGATAGAAGGAAAAAGAGAAGTCAGAGTGAATCTGAAAATCAAGAAAAGAAGAGACAGTACACAAGAAGAAGAAGGAGTAGTAGTACAACAGAAGACAAATCTGATTCAGTATCTGTTGAACCAGAGTCTCCGAGTAGTGGAGATGATAAGAAAAGAACTAGAAAAAGGTCATCTGGTTTAGAATCTTTGGAGTCCAACAGTCCACAGAAAAAAAGAAGGTTGCTTTCtgataaaaaatcagaaatatcTCTTGgggaaagcaattctcaacagAGTATCAGCACAGATGATGAGACAAATCAAAAAACTACTGACCAAGATACCGAGGATGCTTCAAAAGGAAGGGATTTCGATCTTATACAAATTCGATCTGAGCTGAAGGGATTAGACAAAGCTGTGAAAAACGAAGGCGATTCTTACAAATCTATATCATCTGAGGCCAAAGTTAGTGATAAAAAGGCTGAAAATGAAAAGTTGGCTGaagatatttatgaatttaaagaaCCAGAACCCTTTGAATTTGAAGCCCGCAAGAGTGACGACAAAGGCAAAGCATTGCAAAGAAGACCACTTGGAAGGCTTTTTGATGATACTAAAAAACATCAGGCTGTACTGTTACCAAACATGTTTTATAAAGGTAAAAAGGACCCTAATCCAGAAGAGCAAAAGAAAACATTCTTGAACACAATTTATAACTTTGAAGAAGAACGGTTTGAAAAAGTCAACATGTCCCCCAGAAAACCAGTTGCAGAAGAACCTAGTAGCTCTCCCTCTAAACCTTTTCAACTTTTCTCTGAGTTACCTGAAGAAGAAAGTGAACTTCAAGCAAAAGACACCCCCAATCCATCAAGTTCTCCTTTTGCTGATAAAGAGGAAACTCTGGAATCTGCATTTACAAAGTTGGATGAACCTTCAAGTCCTGCTCCTTCTACATCACCCAAAAGTAATTCTCATACTGACattgaatttaatgaaaacagTAATATGGATTCTAATGAAGTTGAATCCACTTCCAAATCATGCTTCTCACGTGATGATGATGACGATGAAATGGAAGATGAATCTATCAACTTTGCAATTCAACGAGCCATAAAACAAGATATATCAGACGATGAAGATACTAACCACACTCCCACTCTTATGAAGTCTACTATTTTCCCATCACAACTTGACAAAATACCTGATAAACCTGTTTTAGTTGAATCAGTTAATGTTCATGAACAGGACGATTTAGAGTCTTGTCCTATTCTGGAAAAGAATGAAGAATCGCTAGATAAAGATGACCATTCTTCAAATGGAATGGAATCTGACGAGGAATCAGAACCAATACTACAAGAAGAGGATAAAGACGATAAAGAAGATAGTATCAAGGATGAAGAAGACAGTGAAgatgatgaagaagaagaagcaGAAACAACTGTTATTGAATCTAATGTTGTTCTTAGTTCTGGGGTTGTTGCTGATAATGTAGTGATGATTGCAGGAGAAGAATTAGTTTCCACTAGCTCTATCATTACTCCCATTGTTGTACCTAATGATAATAAGGAAACGACCTTTGAATTTTCCACGGATCTTTCAGAAGAAGATCAAGTGGCAAAAGCTATCTTTTCCCTCTCCTCTAGCCCAGTCAtccataaaataaatgagtctATAATTGAACCTATAGCTGCAACGGTACAAGTTGAAACTAATGACTCAGATATTTCAGACACCGATGATCTAGAGGGTGTTAAAGAACTATCTGAAGAAACTGTTAAATCTGAGCATGGGTTCTCATTTAAAGCTATTACTGTCCCCCCGCCTGATGACAGTGAATCAACTTTAAGTATTCCTtacactgaaaataaaaataatgatgaacTCATTATTAATTTAGAGCCTTTGAAACCTGAAAAAGAGAGTAGAGTTgataatgaagaaaataatagAATGGATTATAATTTAGATTCTCTCTTGTGTGAAGAAACAATCCCTGGAAGTCCTGGCTGTGGAGAAGAGAGTGATGAGAAAATTGCTTCTGAACAACTTCTTAGTTTAGAAAGTAAAATTGAGAGGATTGAAGAAGTTATGTGTCAACCTATAGCTGAGGAGATTGTTAGTACAGAAATATCTTCACAAGTTGCTCCTGAAATTTCACCCCATTCATCTCCAAATGATTCTATCCCTGTTGAATCAGCTAGGTCCCCTCCTACTGGTTCATCTTATCATAATACTGCTGAGAATCAATTTACTGAAACTAAAGATTCAGACGATGAATCTAAAGTTGATAAAACTCCGACTAAACAAGAAACAATGCGTAGAGCAGGCTCTTCTCTAAAGAGGCCTAAATCATGCAAGAAGCGTAACACTGATAATGTAAAACGCAGGCATTATCGAAACAGGCATGCGGGAAGTGAAAGTGATGATACATCTGAAAATTCATCGAGTGCTAACATGGCATATAATAGAGCTAGTATATCCTCTAATGCAGACTCATCAAGTAATGATGGTAGATCACTCTCGAAATACAATTTTCTTGTTCCACTTGATCCATCAATGGATCAAAATACTAGGATACAACTTATACAAAATAGTATTCAACAGATTAGAAAAGTTTATGCTGATTTGAAAAGTGAACTGGCTGTTATTGATAGAAGAAGAAAGAAACTACGTAAAAGAGAAAGGGAAAGTCTTGCAGCTGCTCGTGTGCATTAG
Protein Sequence
MMADDPPYLSVGTEVSAKYKGAFCEAKIRNVVKTVKCKVLFKQGLGMVTVLDDAVKGIIRVGSIVEAKHPERKEYVEGTITKIQDSSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRRGGESSDEEEVSPKAKVPKEEKEADIGRVVCVEGDKKKQRDNWFPGLVVAPTAQDTVRIHVRDEYLVRSFKDGRYYTVPKKETTEFAREAGAKVDNHSVKAAVEKAVLFLDKDELPPHWDRDSLFGLNEPSNYESDHDSDSDNPDDEPREEKDHFVAQLYKFMDDRGTPINQGPTICSKDVDLYRLFYVVHKLGGYNRVTNHNHWKIVSRKLGYGPSIVNVNLVKHVYKRFLHSFEEFYRKLGCTMVSNPRTYRNNRRAGRSIIREKDRLAVKADKDRSDADESEEASVAGSLGTLQDVQDIKMELDETIPEPITPCKIKIEPKEEPEKKETKKSIEKEKPIPKIKEEKKKVKEEEEKKKLKEEEEKKTLKEEETKKKLKEEETRKKLKEEETKKKIKEEESKKKLKDEEAKKKIKEEENKKKIKEEELKKKLKEEDLKKKIKEEEESDDDAKAKTEPKEKPRVRQTKVKSNETTPPTVKKDIKKEVEDKEDSKTNPVEKKKRLFTRGLVKEKEKLGLNKPGLSPGLAATRQKRAIKDRVKAFVDRVKNRLTKDTSSVTSESSDKSQNSNKEKVVKDKKEDKETAPTPAVKKKEEPVKEEPKVLSEEKKKVGRKKKEKKEFDDSECQPTYKTVCVGDKLKVYYGPTNESKVTYEAKVLSVKNDGPEVMYLVHYTGWNNRYDEYIKHSRIADNLSWVPGRSGKKAMLSFLKPSRRKNSISKPETSCGKPDGPPNAKTENKGDAPNAISAKADSPNSKTSSSIDSSPQGKSSKSFTVTRSSSRNSIKKEESSAEVETEEESDCTIPKLYLSDELLSDKTPSEKVKEILGISDDSSLVNMPERRKTKRRIGGDDLTKNKKLDSKGKEDSTSRDESSPSPKIDRRKKRSQSESENQEKKRQYTRRRRSSSTTEDKSDSVSVEPESPSSGDDKKRTRKRSSGLESLESNSPQKKRRLLSDKKSEISLGESNSQQSISTDDETNQKTTDQDTEDASKGRDFDLIQIRSELKGLDKAVKNEGDSYKSISSEAKVSDKKAENEKLAEDIYEFKEPEPFEFEARKSDDKGKALQRRPLGRLFDDTKKHQAVLLPNMFYKGKKDPNPEEQKKTFLNTIYNFEEERFEKVNMSPRKPVAEEPSSSPSKPFQLFSELPEEESELQAKDTPNPSSSPFADKEETLESAFTKLDEPSSPAPSTSPKSNSHTDIEFNENSNMDSNEVESTSKSCFSRDDDDDEMEDESINFAIQRAIKQDISDDEDTNHTPTLMKSTIFPSQLDKIPDKPVLVESVNVHEQDDLESCPILEKNEESLDKDDHSSNGMESDEESEPILQEEDKDDKEDSIKDEEDSEDDEEEEAETTVIESNVVLSSGVVADNVVMIAGEELVSTSSIITPIVVPNDNKETTFEFSTDLSEEDQVAKAIFSLSSSPVIHKINESIIEPIAATVQVETNDSDISDTDDLEGVKELSEETVKSEHGFSFKAITVPPPDDSESTLSIPYTENKNNDELIINLEPLKPEKESRVDNEENNRMDYNLDSLLCEETIPGSPGCGEESDEKIASEQLLSLESKIERIEEVMCQPIAEEIVSTEISSQVAPEISPHSSPNDSIPVESARSPPTGSSYHNTAENQFTETKDSDDESKVDKTPTKQETMRRAGSSLKRPKSCKKRNTDNVKRRHYRNRHAGSESDDTSENSSSANMAYNRASISSNADSSSNDGRSLSKYNFLVPLDPSMDQNTRIQLIQNSIQQIRKVYADLKSELAVIDRRRKKLRKRERESLAAARVH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-