Basic Information

Gene Symbol
Arid2
Assembly
GCA_018340805.1
Location
JACMZG010001870.1:13850043-13854833[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-26 9.2e-23 81.6 0.0 1 89 16 102 16 102 0.95
2 2 5.9 2.3e+04 -3.1 0.1 7 51 615 656 609 682 0.63

Sequence Information

Coding Sequence
atgaatgaaataacTACTTTAGAGGATTCTATTCAATACGATAAAGAGCGGGATTCGTTTTTACGAGATCTCCAGGAATTTCATGAGAAAAGAGGTACACCTTTCCGTGAGGGCCCTAAAATAAGTGGTAGATGGGTCGACTTGCACCAACTTTATAATTTAGTCACTTCTGAAGGTGGTTGGGTCAAAGTCAATAGCAAAAATGACTGGGATAAAATTCTGGACGATTTAAAACTACCTAAGAACTGCGTCAACAGTTCGGTTGCGGTCAAGCAAATTTACCTGAGATATTTAGATCGTTACGAAGAAGTTTATTTCTTTGGTGAGATTGAGGAGAGAGGTATGGGAGATGATGAAGAAGATAGTAGGAACAGGAAACTAACTATGAGATCTCTCAATGCCTTCCCACATTACTACAATCATATGCAGCATAGTGTTAACGATTCATTAAGAGATTGTAACGGCTTGTCTATTGATTTGTACAAACCTTCTGAGTATGATAAATTGGCTTTATCTTTATTAAGCCCTTTAGCTAATGAACAAGATTTTGCAATTAACGTGTGTACTTTAATATCTCATGAAAGTAAACATAGCCTAAAATTACAGAAACATCCCCGCATCCTCCATTATTTACTTGCTCACGCTGCTGTTTTCAATCATTCTGGTTTGAGGCAAGTTATATCTCAGCATTACTCTCAAGGTAGATATAATGCTATGACTAAATTTTGGCATGATATAGTCAGTGATTGTAGATTAGTAAGATTAATTGATGAGAATAAATTCCAAGAAAATGAGTACGAAGATGATTTGCCTGAGGAATTAAATATAGAAGCTAAAGAGAAAGaggaagttttaaattttgaccccGAAGACGCTGAGTTGTTTTGTATTGGTAGAACTCTAGGGACTCAAGAATATGTTGGACAGAGAGTCTTACAAGTGGCTAGCATACTGAGAAATTTAACATTCATACAAGAAAATGTAACAGTAATGAGTAAAGATTTGACATTTTTAAGATTTGTGTTGTTGTGCTGTGGATCAAACTGGAATAGTTTACACCAGATGGGTTGGGATATGCTTGGTAATATAGCTCAGGAAATAACCATACTTTGTCCCCTAATGCctgaaattttagattttactgTTCAAGGGCTTGATTCAAATGACAGAGCTCAGATACTATCCTCACTCGAAGTTATGAACAGACTTGGTTTAAACAGTAAGAACgaagattactttttaaaatatttaaaaggtaaGACTTACACTAGAATTTGTTCCTTCTTATCAGTACAAgatataatgttattaatttatactttagagTGTCTTTATTCTATTAGCTCTATGGGAGAAAAGGCATGTGATGCTATTCTGAGAGTACATGGAGTTTTGGATACTTTAGTTTCACTAGTGACTGTAGAAGCTCAGAGTTATGGTCCTAAAGCTTGTATACAGATGAAAGTAGTAGAAACTGTGACAGGAGTAGCTGGTAGTAATATGGCTAACGGCAGTGTCGCTCCAAATCAACAGAGTACTCCTAATACTCCGCAAACTGTTTCTACACCTAGCACACCTCAGTTATCAACATTATCAACTCCACCTCTCAGACCTCAGATGGTTTTAGCTCAGGGCTCACAAGGTCAAACTCAGGTTGTTGTTCAGTCACCTAATAAAGTTATCCAGACTCAAATGAACCCTGGAACACCGACTACGTCAAAACTAGTACAAGTAGTCCAAACTCCCAGTGGCCAACTTCAAGTCGTAACTTCTCAAGCTCAAACCCCTACTCAAAATACAACACATGTCCAAGTAAGTCAAGGTCAAGTTATTCATTTAACACAAACTCTTAACAAAGTTGTTCAGGCTCATCAAGTTTCCTCACCTCAAGTACAAACTGTTCAAGTCTCTCCATCTCAATTCCAAGTTACACAGGCACAAAGTGGACAGATTCAAGTTGTTCAAACTTCTCAAAGCCAGCCTGCTACTCAGCAGGCACAAGTTATTCAGTCCCAGCCAAGAATTACACTAAATGCCGCAGCTAGCACCAGCAGTCCAACTGCTAGTGGATCTCCTCAACAAGTGGTACAAGAGAATGAACGTTTTGTACTTCTTTGgcttaaaaatacatttgagCTGAATCCAGGATCTCGTATTGAACAGCAAGAGTTGTACAAGAAATACATTGATTACTGTGTTAAAATAGGTCGACGAGGGGTTATTGCACCTTTACATTTCCCTAGATATGTTCGCACAGTATTTGGAAGCAATGTTGGACCAGTGACATGCTCTGCTGGAGAATTATCACAGCAATATTTTGACGGTATACGATTAAAAGCAGAGCCAGCAGCTTTACCTGCACCACTAGCTCAAGTTAATCAAACAATGTCTCCTCTGCTAAAAGCTCAGCTGAGTGCACCTCTGAAGCCTACCAGCTCCCAACAGCAACCCAAGGTCATCCAAAGACAAATCATTTTGCAACAGGGCCAAGATGGGAGATGCATTGTTACTTCCTCTCCTAGCCAAGCTGCTGCTCAACCTTCTTCCAACCAAACTACATCTCTCCCTCAGTCTACAACTACTTCAGTCATAAACAGTGTTATTGCTCATTCCATGTCTCCTCCACCGACTTCTACAGGTGTGTCAGTTATTGAAAAACTGCCAACTATTGCTACTCCTCAAACCTCTGAACTTAGAGAAGAAAAGATTAATGGTGCTCAGTTGCTAAatgatataaaagtaataatgaaaaaagaagTAGAAATGGAAACAGAAGTTTCTAGTACTTCTGAAGATACTTCTCAGTCAGTGACTCCGTCTGCTGCTACCAGCTGTATTAAAGCTACTCCATCCCTTTTGGATCATGAATACACTGGAAACACAGTTCCTAATTTAATTCCTGTCATTCATCCTGATGTAAAAACAGAAATGAAAGTTGAACCTCCATCAAATGAAAACAGTAGTGACAGTTTCTTGATGAATGGACTATCCTCGAGGGCTTCAGACACGGAAGATAGCAATAGCAAAGATTCTGCACCCAAAAAATTAATGTTGGCTGAtcttttagagaaaaatatgGATAAAACTGAACCACCATTAACTAACTGCTCTTTGAGAATAGGAGAAAAGGGTTTAGAACTCGTACCAGGACCTGAAAAAGAGAAACCTAACATTGTTGATACTATTAATAACATCGTTGACgctaatacatttattgtaaaacaaGAATCTAATTTGAAAAGACCCGGTGATGAGTTGGTCGAGTGTGAAATTAAGAAACCTAAGATAAATGGCGGATCTCTTTTAAAAGAAGAGACCCCAGAGGAAGGTAATGTTTCTTCATCAGCTGCAAATCTCTATGCAGCACTAGCAGCTGATGCTTTGGAAGATGAACCTGTTGAAGAAATTGCTAAACCTGTGCAGCAAACTCAAGCAACTCAGCAACAGCAAGTTGTTACTGTATCAGGAGTTGGTCAACAAACAAGACAAATACTGCTAACAACGGCTGGCTCTCAAATAGCCCAGAGTGTTATTGTGGGAGGTCAACATTATATTGTGGCTCAACCTCAGACAACTCTTGTACAGGGGCAGGGTCAAACTGTTCTATTAGCTCAAACTCAACAACAAGGAATGGGTGGAGCAAAAACTATCATTTTTCTACAGCCCCAAAATGTGAGTGGTGGGAATGCACAGCAAAAAGTTTTGGTCCAGACTGGTAATCCCCCTCCTTTGATCGCTACATCTCAAGCTCAGAGTACTGTTCTAAGGCCTAAAGGTACCAGCAGTACTTCACAGACATCTCTCCTACAACAAGCCATCATGAGACAAAATTTGACTAAAACTATTCAAGTACAAGGGAATATTCATTCTCCTCAGAAAACAGTTTTGCAACAGCAAACGGTTGTTCAGCAGCCACAATCAGTGCAGACATCAGTGGTTCAAACCTCTACCATCCATCATCAACCTACAATAGTTCAATCATCTGGGCAACAGACTGTGGTTTTACAGCAACAACCTGTGGCTTCTAAATCTGAAATCAAAGTTTCCTCCAGTGTTCCTGTTGTTACTTCAGCAACTACCTCAGTAGCTATGGCAGTGACTTCGACCACTTCCAGTCCTACGGTAGCTGCGACTTCACAGATCCAGCAAACTCCTACATCATCTGTTAACCTTCAGACACTCAAACAACAGATGGAGAAGGGTAAATATTTGTGCGAATGGAGAGGCTGTATGAGAAGTTTCAAAACTCCTGGTGAATGCTACATTCATGCTTGTGAGACTCATTGTCCTGAAACTCCTAAGGATATACAGTGTTTGTGGCAACGATGCGATACAATGAAACGCAAAAGATTTTCACACATGACTCATTTATATAATCGACATTGTAATCCTGAAGTAATGAGGATATCAGCTGAAAGAAGTAAACAATTATTGGCAGCTGGTAAACAACCCCAAGAGCCTCCTCCGCAGCCTGTGCAGAGCATGCCTCACCCTGGCTATGCTCCTAATGCAGCTATGCTTGCTATTAACCGCCACGCATCCGATTATGTCAACCCTAAGGAACTTCAAGATGAAAATGAAGGTCCCGTTACAAAAAGTATCCGACTGACATCAGCGTTAATTCTTCgtaacttaattatattttcaaccaACGGTCGGAACCATATGTCACGCTTTGAACCACATTTAGCAAATGTGGCACTGAGTGGAGTTGAATCTTCAAGAACAATAGCACATGTTCTATTTGATATGTGTGAGAATCGATGGCATGCCCCGAGCTTTTTagattag
Protein Sequence
MNEITTLEDSIQYDKERDSFLRDLQEFHEKRGTPFREGPKISGRWVDLHQLYNLVTSEGGWVKVNSKNDWDKILDDLKLPKNCVNSSVAVKQIYLRYLDRYEEVYFFGEIEERGMGDDEEDSRNRKLTMRSLNAFPHYYNHMQHSVNDSLRDCNGLSIDLYKPSEYDKLALSLLSPLANEQDFAINVCTLISHESKHSLKLQKHPRILHYLLAHAAVFNHSGLRQVISQHYSQGRYNAMTKFWHDIVSDCRLVRLIDENKFQENEYEDDLPEELNIEAKEKEEVLNFDPEDAELFCIGRTLGTQEYVGQRVLQVASILRNLTFIQENVTVMSKDLTFLRFVLLCCGSNWNSLHQMGWDMLGNIAQEITILCPLMPEILDFTVQGLDSNDRAQILSSLEVMNRLGLNSKNEDYFLKYLKGKTYTRICSFLSVQDIMLLIYTLECLYSISSMGEKACDAILRVHGVLDTLVSLVTVEAQSYGPKACIQMKVVETVTGVAGSNMANGSVAPNQQSTPNTPQTVSTPSTPQLSTLSTPPLRPQMVLAQGSQGQTQVVVQSPNKVIQTQMNPGTPTTSKLVQVVQTPSGQLQVVTSQAQTPTQNTTHVQVSQGQVIHLTQTLNKVVQAHQVSSPQVQTVQVSPSQFQVTQAQSGQIQVVQTSQSQPATQQAQVIQSQPRITLNAAASTSSPTASGSPQQVVQENERFVLLWLKNTFELNPGSRIEQQELYKKYIDYCVKIGRRGVIAPLHFPRYVRTVFGSNVGPVTCSAGELSQQYFDGIRLKAEPAALPAPLAQVNQTMSPLLKAQLSAPLKPTSSQQQPKVIQRQIILQQGQDGRCIVTSSPSQAAAQPSSNQTTSLPQSTTTSVINSVIAHSMSPPPTSTGVSVIEKLPTIATPQTSELREEKINGAQLLNDIKVIMKKEVEMETEVSSTSEDTSQSVTPSAATSCIKATPSLLDHEYTGNTVPNLIPVIHPDVKTEMKVEPPSNENSSDSFLMNGLSSRASDTEDSNSKDSAPKKLMLADLLEKNMDKTEPPLTNCSLRIGEKGLELVPGPEKEKPNIVDTINNIVDANTFIVKQESNLKRPGDELVECEIKKPKINGGSLLKEETPEEGNVSSSAANLYAALAADALEDEPVEEIAKPVQQTQATQQQQVVTVSGVGQQTRQILLTTAGSQIAQSVIVGGQHYIVAQPQTTLVQGQGQTVLLAQTQQQGMGGAKTIIFLQPQNVSGGNAQQKVLVQTGNPPPLIATSQAQSTVLRPKGTSSTSQTSLLQQAIMRQNLTKTIQVQGNIHSPQKTVLQQQTVVQQPQSVQTSVVQTSTIHHQPTIVQSSGQQTVVLQQQPVASKSEIKVSSSVPVVTSATTSVAMAVTSTTSSPTVAATSQIQQTPTSSVNLQTLKQQMEKGKYLCEWRGCMRSFKTPGECYIHACETHCPETPKDIQCLWQRCDTMKRKRFSHMTHLYNRHCNPEVMRISAERSKQLLAAGKQPQEPPPQPVQSMPHPGYAPNAAMLAINRHASDYVNPKELQDENEGPVTKSIRLTSALILRNLIIFSTNGRNHMSRFEPHLANVALSGVESSRTIAHVLFDMCENRWHAPSFLD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-