Basic Information

Gene Symbol
pnr
Assembly
GCA_027564375.1
Location
JAOPUG010000091.1:5267757-5279519[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-18 2e-14 53.9 3.2 1 34 125 157 125 159 0.97
2 2 1.5e-19 1.4e-15 57.6 5.8 1 35 179 212 179 213 0.98

Sequence Information

Coding Sequence
ATGTTCCACAGCAACGCTGGCAATTATGTGGAAATGTCATCCGGCGCCGGCGCACACTACCACGGGCAAGCAGGTCACCTGGCTGCACAGGCTCCAGTCTACGTACCCTCTAGCAGGGCGATGCCTCCGACCCAGTATGGACACAGTGGTCACCACTTTGCGGGAGGTCAAAATCCCTGGCACCATGCGTCGCCTGATGGATACGGGGCAGCTGCTGCAGCTTCTCTGAGTCCAGCAGGAGCGCTGCCAGCACAATTTTATACAGCACAAAACGCAGTTATGATGACCTCGTGGAGATCAGCCTATGACGGATTTCAACGAACCAGTCCGTATGATGGTGGCATGGAGTTCTCTTTCGGAGAAGGAAGGGAATGCGTCAACTGTGGGGCGATTTCTACACCTCTCTGGAGAAGAGATGGTACCGGTCATTACCTCTGTAACGCTTGTGGTCTCTACCACAAGATGAACGGAATGAACAGACCGTTGATTAAACCTAGCAAAAGACTGAATGCAAATAAGCGCCTAGGACTACATTGCACTAACTGTGGAACACGAACTACGACTTTATGGCGAAGAAACAACGATGGCGAACCAGTCTGCAACGCATGTGGACTTTACTTCAAGTTACACGGAGTCAACAGGCCTCTGGCGATGCGGAAGGACGGCATCCAGACCAGAAAGCGAAAACCGAAGAAATCCGGCAGCGCTTCCGTTTCTGGAGGAGACGACGCCTCAAAGAAAGATGAACCAGCATCCCCGGGAGTCGAAGAATCTAAGGGGCACACCGGCCATGGATCTCATCAACAGAGCCAGTCTTCAACAAGCATGGCTTCCATCAGCAGCCACCATCGCCCCTCTTCGGAGAGCGGCGTAAAACTATCACCGAGCAGTGAAAGGCCATATTTAGGGCAGACTTCACTTCTACCTACTTCCCAAGCGAGCCATATGGACCACGTCCAACCCATGGCAGCTCCAAATACAATGCACAACCAGACCTACCACTCGAACTCAGTATCTTCATACACTCCAATCAAGAGTGAACCTTCTATCCACAACAATTCTAATTATGAAGGTCAGAGTTACTCTGGTCATCATTACCATAATACCACCGCGTCGAACCAGTCCTCATACCACTTTCCGTCCCCTCTGCAGCATGGATTCAGCTCAATAGGGGGGAATATTTCGGGGCTGAACTCAGGTGTTGGAGAAGTAAGTGGCTACCATCACCAACACAATGTTATACAAGCAGCCAAACTCATGGCGTCTTCATAG
Protein Sequence
MFHSNAGNYVEMSSGAGAHYHGQAGHLAAQAPVYVPSSRAMPPTQYGHSGHHFAGGQNPWHHASPDGYGAAAAASLSPAGALPAQFYTAQNAVMMTSWRSAYDGFQRTSPYDGGMEFSFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLNANKRLGLHCTNCGTRTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSGSASVSGGDDASKKDEPASPGVEESKGHTGHGSHQQSQSSTSMASISSHHRPSSESGVKLSPSSERPYLGQTSLLPTSQASHMDHVQPMAAPNTMHNQTYHSNSVSSYTPIKSEPSIHNNSNYEGQSYSGHHYHNTTASNQSSYHFPSPLQHGFSSIGGNISGLNSGVGEVSGYHHQHNVIQAAKLMASS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01008246;
90% Identity
iTF_01008246;
80% Identity
-