Mfac020117.1
Basic Information
- Insect
- Micropterix facetella
- Gene Symbol
- RREB1
- Assembly
- GCA_027564375.1
- Location
- JAOPUG010000057.1:8089619-8108712[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 4.9e-05 0.0031 18.9 0.6 1 23 113 135 113 135 0.98 2 12 0.11 6.8 8.4 0.7 2 23 224 246 223 246 0.94 3 12 0.16 11 7.8 0.1 1 23 425 447 425 447 0.97 4 12 0.0018 0.12 13.9 0.9 1 23 456 478 456 478 0.99 5 12 0.0015 0.097 14.2 2.0 1 23 484 507 484 507 0.97 6 12 0.0015 0.095 14.2 2.8 1 23 890 913 890 913 0.96 7 12 0.0005 0.033 15.7 1.3 2 23 1199 1220 1198 1220 0.97 8 12 0.035 2.2 9.9 5.1 1 23 1226 1249 1226 1249 0.97 9 12 0.097 6.3 8.5 4.0 1 23 1285 1309 1285 1309 0.95 10 12 3.9 2.5e+02 3.4 5.1 1 23 1354 1377 1354 1377 0.94 11 12 0.025 1.6 10.3 0.4 2 23 1435 1456 1434 1456 0.94 12 12 0.016 1 11.0 5.9 1 23 1462 1484 1462 1484 0.98
Sequence Information
- Coding Sequence
- ATGGCGGTGTCCCGCAAGGATCGTGCACGTTACCAAATTAATAAAATAACTGTCGAGAGAGTCAGCGGCTGTTTGATATGCGCGGCGTTCGCCACCTCAGCAGCGGTACTCGACTTGGAGTACCTATCTTGCGAGAGGCGACCGACTCTGCATGTTAACGCGGGCGACGGCACTCACCGAAGCAGATGCTATACGAAGATGGACCTATCATCAGTTACCAAAGACACAGAACCAAAGAGCTTCGTCGCTAAGGCGAAGCGGCAGCAGTCCAAGAGCATCGACAGCGACAACAGATCCGAGAGTCCCAACTCCACTCACGGGGCAGATCTCAACTCCTTTGTCTGCAAGACCTGCGACGCGAGCTTCGCCTCCGCCGCTCTCGTGCACCGACACATGCGAACCCACAACGAACAATACGACAGCGACGAGTCCGCCTCCTCTTCCAGCAGCACAGAGGAACTCAGCCAGAGATACACAAGGAAGAGACGCTTGGAATACAACAATAACGATAAAGATGATGCGGATCCGAAACGGAAGAGAACCATCAACAACAACCTGATCAACGGCCACCGTCTACCTTGCCCCGTCGCACTCTGCAGAAACACCGACTTCCAGACCGTGGAATCGCTCGAGGTCCACCTCGAATCCGACCACCCGAACTACGAACTCCAATGTCCGTCTTGCACCCTCACCTTCAAGAACTACAGGGTGCTAAACCTGCACCGGTTCATGGCTCATCCTAGTCCCGCCGCTAAGAGCCAAGTGACCGGATTCGATGACCTGACCTTCATCGACTTTTCTAGCAGAAAGTTTCCGCAGATTGCAAGAACGGTATGCGAGCAAAACTACCACAAATCCGTGACGGAGCTGCAATTCCGGTGCGTTAAATGCTCCAGGGACTTCCCATGCGAAAGCGCTCTGGATATACATAGACAGGCTTGTTTCACCCCGACCACTAAGTCCAACCTACATCCATCAGATAGTTCCGACGAGGAGATCAAGCGAGAGGACTTCTTCGCAAATCTGGACCTGCAGAATCGCAGCTTGAAAGTCAAGAATGATCTGGTGCAGGATAGCGGCAAAGACCTCGCCGACATCCAGTCGATCTTGACGGTGACGTCGACGGGGGGACTGCTAGAACAGCTTACCCAGAAAAACCATGAGCTTAACCACATGACGCCACCGGAGATGAACTTAAAAGAGAACGAACGAGAGGAGGAGACTCAAGATGCCTTCGCCTCAGAGTTCAGAAAAATGAAGCTGCGTGGGGAGTTTCCGTGCCGCCTGTGCACAGCTATCTTCCCAAATTTGAGGGCTTTGAAAGGCCACAATAGAGTGCACCTTAGCGGCAACGGCCCCGGACCATATCGCTGTAACATGTGTCCTCATTCCTCGCTGGACAAAGCGGCATTGGTCAGACACATGAGGACGCACAACGGCGACAGGCCTTACGAGTGCGCTGTCTGCAACTACGCCTTCACAACCAAGGCTAACTGCGAGCGGCACCTCCGGAATAGACACAACAAAGTCACCAGGGATGACGTCAAACGCTCCATCATCTATCATCCCTCAGAGGATCCCAACAACGACGAGGTGAACAACAAGCTGAACATATCGAGAGAAGACATCAAGAGATCATTCGTGTTTCACACTCCTGAGAGCATGGAGAAGGATCTGGAAAGGGAGAGAACCGTTAGTGATAGGAGCACTCCCGTAAGCCACTTTCCCCGGGAGCAGAGCATGGCTTTCGCTAAGGAAAGGTTGAATATACCGATTCCAAGGGATTTGTCTATAGTGATTCCTCAGCCTCGGGATATCCTGGCGAGGCACATCGCCGCTGAACCGTCTCCGAAGCAAGAACAGATCGTGCAGCCGCGTATAAAGGTCCGGGGACTGGGGCAGCTGACCCAAATCCCAGAGTTTCAAGAAGACAAGAACGAACCAGAAAGAGACAGCGAAGACGAAGAAGACGAGAAGGTACCGTACTGCGGCGATGCACCGATTGATTTGTCGACGAGCGAAGGCGATGTCCTCGATCTGTCGAAGAAGAAGACCAGCGAAGAACCAGAGTTCAGTCCGTTCAACATGTCGATGACACAGCAGTTGCTGTTGGCGCAGCAGCAGATCTTGAATATGCCAAAGATCGATCCGGCGTCATTCTACGCATCGCAGCTGAGTCAGTTGTACAGGATGCCAATGCCTCCTCCGTTCCCGCTAAACCCATACTTCCTACATTCGAATCCGTTTTTGACTCCCACTGCTAGTCCTCAGGACATCGCTGATATGAAAGAACGCATACAAAAAGAAATCATACGCGGGTTGCAGATGTCTGGAGGAGAACGCATACAAAAAGAAATCATACGCGGGTTGCAGATGTCTGGAGGAGGTCTCGTTAATATGGATCATACGAACATACTGAACAACATGGCTTTAGCTAATGAGAGACTGCAAGCGCTTCAACAGCAGGCGGCCATGTCGACCCCGGAGCCCAAGCCAACCACGCCGGTACCAGTCATCAAACACGAGGAAGAACAGCTCCAGAACGCCTCGCTCTCCCCGAAGCCGAAGGCGCAGCAACCTATTCCGCAGAACTCGGTAAAGATGGTAATCAAGAACGGAGTGCTCATGCCGAAGCAGAAGCAGCGCCGCTATAGGACAGAGCGACCATTTTCCTGCGAGCACTGCTCGGCGCGGTTCACGCTTCGCTCTAACATGGAGAGGCATATCAAGCAGCAGCATCCGCAGTACTGGTCACAGCGGCAGAGGACCAACGTGGGAAACCTGCCGCGGAAGATATCCATTCCGCAGCCCGGGGCGGCTTTCGACTGCCGCATGAACTTCATGAAAGCTGGCGTTCCGAACGAGAACGCTCTGAACATGAACGAACCTTACAAGCCGATATCCGATCAGGTCAAGTACGCGATTCTTGCGCAGCAGCTCAAATCCCAGCACGTAACCAACCCATACGCAGCCCACTTAAACCAATCCGTCATCAATCACCTCCAAGAGCCTAAGCAAGAAGAAGACGACATTGAAGAAGAAGATGCTTTGGTAATCGACGAAGACAGCGAGGACGAGCAGAAGCCGACCGTGATCGAAGAGCCGAATTCCATGGCCAAAAAGGTCGCAAACGAGATTCTGATGGGCGTGTCCAAGGCTCAGCCCCACGACATCAATAAAGACTTCGATTTGAAGATAGCTGGAAATTTGATCAGCAAGAACCCGCACCACCTCGTTATGCCGCCGATCATTCCAACGCTCGTCAGCCAAATCAAAACGAATGCATCTCCTACGGACTTATCGCCCAAGGACGCGGGCACCGATCTGGTGCCGGTGTCGCGCCTGGTCGAGAATTCTGTGAACCAGCTGCCGTTCGGACAGTACTTCAAGATGTCCAATCCGGAAGCGATGAAAACCGATGCTGTCCAATCGCACACGGAAGGATCCGAGGAAGACGAAGAAGGGTTGGTCGCTTCCGGATCCACTAGCGAGGGGAACAACTCTGGGAGTGACGAGAATCGATCGGAGTCCGAAGTGACGAACCAGCAGCCGCAGAAGAAGAAATCGGCGTACAGCCTCGCCCCGAATCGTGTCTCGTGCCCTTACTGCCACCGCAAATTCCCCTGGTCCTCGTCTCTGAGGCGTCATGTCCTTACGCACACGGGCCAGAAGCCATATAAGTGTCCTCATTGCCCGCTGCTGTTCACGACTAAGTCTAACTGCGACCGCCATCTGCTGAGAAAGCACGGAGGACAGGGCGGTGCCGTCGGGCCTACGGCCTCTCTTGTCGTGGAGGCCACACCGCAGCCAGTGGACGCAGGAGCATCCGCCAGAGTGGTGCCGGAGCGACCGCACAAGTGCTCCACGTGCCCCAGCAGCACTTTCTCGACGCTGAACAACCTGAAGAAGCACATGACCTCGAAGCACTGCCCCGGCGAGCACGACGAAGCCTCCGACAAGGAAGAGACCCTCTCCCACCACTCCGACGATGAGGTCAGGAGTGAGCCGCCGCCGTGCAAGGTCGATTCGGTCCCCGTACCTCTGAATTCAGATCTTCCTTACAAGTGTCACCTGTGCGACACTTCTTATGGCGAGAGGCACGACTGTTTGGACCACATCCGCGAACAGCATTCCTCCGAATATGAACTCCTCGTGACCAAAGGTGCTCTAGAAACTGGTGCAGTAGAAGAATCATCCATAGCTGCTGCTGGTGGGAAACTGGAAGTTACCGAAGAACATAACGGCGAAGATAACATGGAGCAGCTTAGAGGAAAATTTCCAGACTATGCAAACAGAAAGGTAGTTTGTGCGTTCTGCATGCGTCGTTTCTGGAGCGCCGAGGATCTGAGACGTCACATGAGGACGCACAGCGGCGAGAGGCCGTTCTCCTGCGACATCTGCCGCCGGCGCTTCACCCTCAAGCACTCTATGCTGCGCCACAGGAAGAAGCACTCCGGATCCTCGAAATCCACTTCCGGCGAGGAGCTGTCTACCGCCAGCGGGGACGAGGACGCCCACGCTGAACAGGCTGATGGAAGGGTACATCCGGAGACTAATTCAATCACTTTGAACGGCTACCAGTTCTCGCTAAGCAACAAGAACCTGTCGGTCTCCCCGGAGACACCGCGCAACGTGAACAACAACAACTCCCCGCCGATGGCGAAAGGCATCATGGTGGACGGGAAGCTGCGGAAGTATTCGACGGACGACAACGACTGCGACATGGAAAACGGCGCGGGCGACCTCATCGGAAACCTACTTGGCATCAGCGACAAGGGAATGATCAACAAGCTACTCTCTTCGGCAGACGAGGCCGCCAAGCTCTTGGGAGTCAATAAGTAG
- Protein Sequence
- MAVSRKDRARYQINKITVERVSGCLICAAFATSAAVLDLEYLSCERRPTLHVNAGDGTHRSRCYTKMDLSSVTKDTEPKSFVAKAKRQQSKSIDSDNRSESPNSTHGADLNSFVCKTCDASFASAALVHRHMRTHNEQYDSDESASSSSSTEELSQRYTRKRRLEYNNNDKDDADPKRKRTINNNLINGHRLPCPVALCRNTDFQTVESLEVHLESDHPNYELQCPSCTLTFKNYRVLNLHRFMAHPSPAAKSQVTGFDDLTFIDFSSRKFPQIARTVCEQNYHKSVTELQFRCVKCSRDFPCESALDIHRQACFTPTTKSNLHPSDSSDEEIKREDFFANLDLQNRSLKVKNDLVQDSGKDLADIQSILTVTSTGGLLEQLTQKNHELNHMTPPEMNLKENEREEETQDAFASEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRVHLSGNGPGPYRCNMCPHSSLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHNKVTRDDVKRSIIYHPSEDPNNDEVNNKLNISREDIKRSFVFHTPESMEKDLERERTVSDRSTPVSHFPREQSMAFAKERLNIPIPRDLSIVIPQPRDILARHIAAEPSPKQEQIVQPRIKVRGLGQLTQIPEFQEDKNEPERDSEDEEDEKVPYCGDAPIDLSTSEGDVLDLSKKKTSEEPEFSPFNMSMTQQLLLAQQQILNMPKIDPASFYASQLSQLYRMPMPPPFPLNPYFLHSNPFLTPTASPQDIADMKERIQKEIIRGLQMSGGERIQKEIIRGLQMSGGGLVNMDHTNILNNMALANERLQALQQQAAMSTPEPKPTTPVPVIKHEEEQLQNASLSPKPKAQQPIPQNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRTNVGNLPRKISIPQPGAAFDCRMNFMKAGVPNENALNMNEPYKPISDQVKYAILAQQLKSQHVTNPYAAHLNQSVINHLQEPKQEEDDIEEEDALVIDEDSEDEQKPTVIEEPNSMAKKVANEILMGVSKAQPHDINKDFDLKIAGNLISKNPHHLVMPPIIPTLVSQIKTNASPTDLSPKDAGTDLVPVSRLVENSVNQLPFGQYFKMSNPEAMKTDAVQSHTEGSEEDEEGLVASGSTSEGNNSGSDENRSESEVTNQQPQKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPYKCPHCPLLFTTKSNCDRHLLRKHGGQGGAVGPTASLVVEATPQPVDAGASARVVPERPHKCSTCPSSTFSTLNNLKKHMTSKHCPGEHDEASDKEETLSHHSDDEVRSEPPPCKVDSVPVPLNSDLPYKCHLCDTSYGERHDCLDHIREQHSSEYELLVTKGALETGAVEESSIAAAGGKLEVTEEHNGEDNMEQLRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHSGERPFSCDICRRRFTLKHSMLRHRKKHSGSSKSTSGEELSTASGDEDAHAEQADGRVHPETNSITLNGYQFSLSNKNLSVSPETPRNVNNNNSPPMAKGIMVDGKLRKYSTDDNDCDMENGAGDLIGNLLGISDKGMINKLLSSADEAAKLLGVNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -