Mfac007904.1
Basic Information
- Insect
- Micropterix facetella
- Gene Symbol
- -
- Assembly
- GCA_027564375.1
- Location
- JAOPUG010000091.1:4244387-4254364[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.19 12 7.6 0.1 2 23 2 23 1 23 0.95 2 24 0.0071 0.46 12.1 0.7 2 23 47 69 46 69 0.96 3 24 0.0077 0.5 11.9 1.7 2 23 85 107 84 107 0.93 4 24 5.5 3.5e+02 3.0 0.2 2 10 153 161 153 173 0.73 5 24 0.18 12 7.6 0.3 1 23 184 206 184 206 0.94 6 24 0.00015 0.0096 17.3 1.5 1 23 271 293 271 293 0.98 7 24 0.00011 0.0069 17.8 4.6 2 23 305 326 304 326 0.97 8 24 1.5 94 4.8 1.0 2 21 370 389 369 391 0.92 9 24 0.02 1.3 10.6 0.5 2 23 414 435 413 435 0.96 10 24 0.0089 0.57 11.7 3.5 1 23 446 468 446 468 0.98 11 24 1.2 78 5.0 2.4 1 23 475 497 475 497 0.88 12 24 0.075 4.8 8.8 0.2 3 23 522 543 521 543 0.95 13 24 4.5e-06 0.00029 22.1 2.6 1 23 562 584 562 584 0.99 14 24 0.011 0.7 11.5 0.8 2 23 625 647 624 647 0.94 15 24 0.00017 0.011 17.1 1.8 1 23 670 692 670 692 0.97 16 24 0.028 1.8 10.2 0.2 2 21 696 715 695 716 0.94 17 24 0.54 35 6.1 3.6 2 23 735 757 734 757 0.95 18 24 0.26 17 7.1 2.5 5 23 805 823 802 823 0.94 19 24 0.0036 0.23 13.0 0.0 2 23 834 856 833 856 0.95 20 24 0.47 30 6.3 3.1 2 23 873 891 873 891 0.89 21 24 0.23 15 7.3 2.9 1 20 894 913 894 915 0.94 22 24 0.53 34 6.2 0.3 2 14 930 942 930 949 0.90 23 24 0.0043 0.28 12.7 2.1 3 23 957 977 955 977 0.96 24 24 0.052 3.3 9.3 5.1 2 23 989 1011 988 1011 0.95
Sequence Information
- Coding Sequence
- ATGCAGTGCCGGTTCTGCGGTGACAGCTTCGAAGAGCAAGAGGATCTGGTGCAGCATTTGGCGGCGCACATGGCCAAGATGGATGCCAGCGAGGCTGAATCCAGCCTTCGGGAGAATATGGAATCTCCAGTTTCCCTCGAGTGCCGATTGTGTTCGAGGACTTTCAGAGAAAAAATCTACCTGGATAAACACATCGAAACGCAACATCTCAACCAAGCGAAACGCATTTCTGACTCGGGCAGAACGGAACTGAAGTGCGACCAGTGTGAGAAAACTTTCTTCTACAAGCAGTCGCTGTTAACTCACAAGGCTGTCAAACATGGCATCGTGGAGAAAAACACCGAGAAGGATGAGTCGTCCGCCAAGAGTTCCGTGAGCATGGTGCAGATTCCAAACGCGTACTTGGACGAGACGAAGAATGACAGCCCCATAATCACCATCGAGAGCTGCCCTGCAAAGTGTTCTATATGCGGGAAGGCGGGAACCGTGCGCGATATGAAGGGACATGGAAACATACACAAGCTGAACAATCTAAAACCATCTAACGAGTACACTTGCCTCGGCTGCGGACTCATCTTCACCAGTTTGAAGATTATGAGAGTACACTTCCGGGAGCACAGGCCAGTAGCCTACCCGACACCGTCGCAGCAGGATAATATGGTGGACCCGTCGAATTTTTGTGAGGTCGTTGTGGCTAACGTGAAATTGGAACCGGATGACAGTGGGTACGATTTTGGCAATACCTCTGCCCAGGACCACAACGACACGAAATACAAGCCTAATTCGGTTCCTGTTGTAAATCTAGAAGGTTTCACCTGCCCACACTGTGGGAAAATAATGAAGACTATGTCATCGCTGACCTATCATATTCGCTGGCATAACAATACTGGACATAAGCTTGAAAAACACTTGCAGTGCACAATATGCGATGAGTCGTTCAAGTACAACTCACATTACCGCGAGCACATCAAGCATCATTCGCGCGATCTAACCCTCGACCCAAAGTTCCGCACGTGCGCAATATGCGGCCGACTCTCCATTCATCTGAGAGCCCACGAGGCGCACATGAGTTGGCACAAGCAGGCGCGTTTCGCCGCCGGCGAGATCCCATGCCCCATCTGCAAGCGCGTCCTACCCAATAATAGGATATTCAAGTACCACATGCGCTGCCACCAGAAGAAAGGGGACATTCTGAAAGGCGTCGATAAGATCAATGCGACGGAGGGCGGCGAGGACAACAAGTGCGGGCTGTGCGGGAAGATAATGGCCAACGAAACCTCGCTGAAGCATCACATGGCCTGGCACAACTCAAAAACTGCGCTGTTCATGCAGCGACACGAGTGCGACGTTTGCAAAAAGTGGTTCACGAATAAACGTCGTTACGAAATACACATGCGGCGCCACACCAACTCCGATTTACCCTACAAATGCGACACGTGCTTCAAAGGCTTCAAAGCAGAGCACTTGAGAGATAACCATGCGAAAATGCACACAGTGAACATTTGGAAAACGAACGAAATGATGAAAAATAGACTGCAAAAGATTCGCGAGAACAGCGTCGCATGCCCTGTCTGCGATAAACTATACCCAAGTCAGCTGAAGCTGCGCGGTCACTTAAAATTGAAGCATCCTCAGAGCAAAATGGTTAAAAAGATCGATCCGGGCGCTGAACCGGCAGCGACCTACACCTGCAACATCTGCGGAAAAGAATTTCCCAACCTACGCCACTACAACAATCACCTAAAGACACATACGCGCAAACCGAATCACTTCGTAAAATGTAAATTATGCAAGAAAAATTCGTACTCGTTGAAATTCCATCACGTTCACATTAAATCGCATCTTGTGCAAAAGTTTCGCCACAACCCGCTCAAGTGTCCGCATTGCGACGAGACGTTCATCCTCGGATACGCGCTGCATTACCATTTGCGCGACGCGCATCAAATCAACGAAGACTACATTATGGACCGCACCGCGGCCGATGATGACAGTGCAGAACTTGAAGAATTCCAGTGCCACATCTGCAAAAAAGTGCTTGCGTCACGCGGAAACTTCGAACGCCACCTCGATTACCATAACTCGCTGACGTGTGACTACTGCTCCGAGCGCTTCCGGAAAATGGAGTTCCTTGAAGCGCATCTAAAGCTGAACTGTGACCGGAAAAAATCCCTTGGAAATGCAACAACATTCAACAAAACGCTAAAATGCTCGATCTGCTACAAAGCATTTTCATTGCAACTCAAACTAAACTGTCATTTAAAAACGAAGCATGACCTTGAACCGGAAGTGATAACGTTCACCCCGCATAAAACGGCCATTTGCGATTTTTGCTTCTCGGAATTCCCCGATGACGCCTCAATGGAGGTCCACAAAAACATTCACCTGCGCTTCTTAACTAACTACGGCTGCATATATTGCCCACGTAAATTCAGCACGGTCACCGCATTCAAAAAACACAAAAACCACCATTTGCAAAGAAATCATGTCGAAAATCCGCTGCGCTGTGACGATTGCGGTGAAAAGTTCATTCCGTTTTACGAATACATTGCGCATTTGCGCGACGTACACGGCACAGAACCCGACATGATGATTCCGCCGCAGGAGAGCCCAGTCGAAAAATGTCCCATCTGCTCCAAAGAATTCAGCCACATGCAGAACCACCTGCGGTTCCATGAGAAGTACCGCTGCACCAAGTGCCATGAGTATTTCTTTTCAACGAGCGCATTCGCCGCGCACGTCTGCGACGTTGAAAGTGACGATGAAACGACCCCCGAAACCCTCGCCGAGGAGTGCACATACTGTTTCAAACCGTTTACTCGCAACAAAGCGGCACATCTCGCGAATCACGCGAAAGCGTCTTTCATCGCCTGCCGCATGTGCCCGATGCGTTTCAAAAACAACGAATCCTTCCGGCACCACGTTTACACGCACACCAACCGCCGCAACTACGCGAAGACTCCTCTGCAGTGCCGGCACTGCCCGCAGCGCTTTACAAAGTACACGCATTACGTGAAACACAACCGCATCGTTCACAACATAAAGGAGAGTCTGGCGTATCGACCGGAACTTCCGCACGAGAAGTGCGTTGTTTGCGATCGGGTTATGCCGAATCTCGCCAATCATTACCGCTACCATTTGACATTCCGATGCGGTAAATGCGGGATTTACATCCTATCAGGACGCTTATTCCAGACGCACACCTGCGATTCTTTACCCGACGACCCTGATATGTGGAGAAGGAGTGATGCTGATCTCGAGCAGATCATTAAAGAATTCTCCGTGCGTGTTTATGAGAATTTTATCTGCTCGGATAAGCCAATGGGGCCCGATGAAGAATACAACCAAAGTATCGAGTTGGTGGATTGCCTTCTCGACGACAATAGCCAGAACAATGCGGATTTTGAGCCGATTATTTCCGATACAGTATCTTTGAGCCACGTAAATGAAGACACCGTTTTAGAAAACTCTGAAACCGAGTTAAAAAACGCCGAAGGTGACACTTTGAATGATATACTGGATTCGGTGATGCGTATGAGCCAAGATAGCGAGTAG
- Protein Sequence
- MQCRFCGDSFEEQEDLVQHLAAHMAKMDASEAESSLRENMESPVSLECRLCSRTFREKIYLDKHIETQHLNQAKRISDSGRTELKCDQCEKTFFYKQSLLTHKAVKHGIVEKNTEKDESSAKSSVSMVQIPNAYLDETKNDSPIITIESCPAKCSICGKAGTVRDMKGHGNIHKLNNLKPSNEYTCLGCGLIFTSLKIMRVHFREHRPVAYPTPSQQDNMVDPSNFCEVVVANVKLEPDDSGYDFGNTSAQDHNDTKYKPNSVPVVNLEGFTCPHCGKIMKTMSSLTYHIRWHNNTGHKLEKHLQCTICDESFKYNSHYREHIKHHSRDLTLDPKFRTCAICGRLSIHLRAHEAHMSWHKQARFAAGEIPCPICKRVLPNNRIFKYHMRCHQKKGDILKGVDKINATEGGEDNKCGLCGKIMANETSLKHHMAWHNSKTALFMQRHECDVCKKWFTNKRRYEIHMRRHTNSDLPYKCDTCFKGFKAEHLRDNHAKMHTVNIWKTNEMMKNRLQKIRENSVACPVCDKLYPSQLKLRGHLKLKHPQSKMVKKIDPGAEPAATYTCNICGKEFPNLRHYNNHLKTHTRKPNHFVKCKLCKKNSYSLKFHHVHIKSHLVQKFRHNPLKCPHCDETFILGYALHYHLRDAHQINEDYIMDRTAADDDSAELEEFQCHICKKVLASRGNFERHLDYHNSLTCDYCSERFRKMEFLEAHLKLNCDRKKSLGNATTFNKTLKCSICYKAFSLQLKLNCHLKTKHDLEPEVITFTPHKTAICDFCFSEFPDDASMEVHKNIHLRFLTNYGCIYCPRKFSTVTAFKKHKNHHLQRNHVENPLRCDDCGEKFIPFYEYIAHLRDVHGTEPDMMIPPQESPVEKCPICSKEFSHMQNHLRFHEKYRCTKCHEYFFSTSAFAAHVCDVESDDETTPETLAEECTYCFKPFTRNKAAHLANHAKASFIACRMCPMRFKNNESFRHHVYTHTNRRNYAKTPLQCRHCPQRFTKYTHYVKHNRIVHNIKESLAYRPELPHEKCVVCDRVMPNLANHYRYHLTFRCGKCGIYILSGRLFQTHTCDSLPDDPDMWRRSDADLEQIIKEFSVRVYENFICSDKPMGPDEEYNQSIELVDCLLDDNSQNNADFEPIISDTVSLSHVNEDTVLENSETELKNAEGDTLNDILDSVMRMSQDSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -