Mfac037714.1
Basic Information
- Insect
- Micropterix facetella
- Gene Symbol
- -
- Assembly
- GCA_027564375.1
- Location
- JAOPUG010158504.1:1-2516[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.078 5 8.8 1.4 2 21 121 138 120 141 0.74 2 13 2.5e-05 0.0016 19.8 1.9 2 23 229 251 228 251 0.96 3 13 0.16 11 7.8 0.2 2 23 261 283 260 283 0.92 4 13 0.00037 0.024 16.1 0.4 1 23 305 328 305 329 0.95 5 13 0.00039 0.025 16.0 1.3 1 23 443 466 443 466 0.92 6 13 0.00089 0.057 14.9 1.4 1 23 479 502 479 502 0.96 7 13 0.00029 0.018 16.4 0.5 1 23 528 551 528 551 0.96 8 13 0.049 3.2 9.4 0.2 1 23 596 619 596 619 0.93 9 13 0.045 2.9 9.5 1.6 2 23 639 661 638 662 0.92 10 13 5.1e-05 0.0033 18.8 1.2 1 23 677 700 677 700 0.97 11 13 0.0076 0.49 12.0 1.1 2 23 719 741 718 741 0.91 12 13 9.7e-05 0.0063 17.9 1.4 1 23 754 777 754 777 0.97 13 13 0.00041 0.027 15.9 0.4 1 23 785 808 785 808 0.97
Sequence Information
- Coding Sequence
- GAGGCTCATCAAGAGTTTGCAGCTGATACGCAAACGCGGCTCGAAAACTCGACTCATCGAACCGAATCAAGAGATCCCGATTATGGTGTTGATGAAAACCATGGATCTGACAATGAATCCAACATTAGTGATATATCTTTCGAATCCAATGCTACTATAAAATCTGGAGTGGGAGACTCTAAAACTACTATAAAATCTGGAGAGAGAGAAGATGAAACTAGATTCCAATCGCAATTAAAACATGTACACAAAAGAAGCAAACCAAGCAAAGGTGTAGTAACATCTGAAGTCCAAGATTCTTTTTCTGATACCGTTGAATCCACTATCGAATCCACTGATCGTATCAACGCATTCCCGTTGAAATGTCAAAAGTGTCCGCGTGCGTTTAGATCGCAATTAAAACAACACATACACAGAAGAAACAGTCCAAGCAACAGCGTATCTCATCGAATTGAAGAAGGCGAGACTGAAGAGCCCAACCCTATTGAGATATCTGATGAATTAAACAATACAACCAGAAATTCTAGCACTAATTTGTTACTTAACACTGCTGATCATGTTCGTGGACACATTGATGAAGGCAAACGCACCGCTTTTTCAATTAAGCTTAAAGTACGAGATTTTGTTTCTGATATCGTTGAAGCCTCTCTTAAAACAGCTAATCCTATCGATGCATTTTCAATGAAGTGCAAGAAATGTCGATATGCATTCACATCCAAATCGCAGTTGACAACTCATATATCGTCAGTGCACAGGTCAAACGAGAGCACGTTTTTATTGGAATGTTCGCAGTGTTCAAGCAAATTTGCATCCGGTAGCTGGCTTAAGAATCACGAGAATGCAGTTCACCAAACGAAACAAACAGATGACGCAGCACAGTCAAGTAATCCATCAATTGATGGTACATCGTTGTATAAATGTCAAAATTGTCCGTGGGAATTTGCCACAACTTCGTTGCTTAATATACATGTACAGGCGAATCATCATGAGTTGGCAGCTGATACTCAAACGCTGCTCGAAAACTCTACACATCTAACCGAATCAAGATATACCAATTATGATGTTGATGAATCCTATGAAACTGACATTGAATCCAACATTAGTGATATATCTTTCGAATCCAACGGTACTATAAAATCTGGAGAGAGAGAGACTAACACTACTATAGAATCTGGAGAGAGGGAAGTTGAAATTATATTCCAATCGCAATTAAAACATGTACATGAAAATACGGTTCATCTAACCAAACTAACAGACACTGACTCTGACGTCAAAGTATCCAGTCAAACAACAAAAACAACTGATATGAATCGAAATGAAGCAACGTTTAGATGTCTGCTATGTCCAAGAGAATTTACTAACTCTCACTTGCTTGAAAGGCACAGAGATGCGACTCATCAACCTGCACTGATTATTTCTGATTGTTCAGCTCCTTACAAATGTTCGCTATGTCAGCAGAAGTTTGCAACGTATCGTCTGCTTGAGCGCCACGAAGAAATGAAACACAAAGGTGACAAAAAAGAGGCTGATAAATCTGATGAATCCAATGACTCGACTCAAAAACTAGACACTCACTCTCTGTATAAATGTGAAAAGTGTCCACTTGTTTTTCAATCCAATGCGAATTTGGTCCATCATGCATCCATGATGCATAAATCTTTTGACTCCGATCGCATGGACGACGGCACATTCAAATGCCGAAAGTGCCATCTCGATATTGCACTCAAATCGATTTATGTGCGACACTTTTACAAATTTCACAAAAGCGAATGGAGCAGCATCACATACGCCTGCGATATCTGCGCCCGCATGTTCTTAAGTCATACATGGTTGCAGCGGCACATTTCTGCCGCTCACTCGAATGGAGAAAAACTCACGGCGCATCAGTCTGAAGTGAGAGACGAACTGCCGATGCAGTGTGTGCGGTGCCCGCGAAAATTTTCGAACTTAATCCGGCTTCGGCGGCACGAAAACGCGAGCCATCACTCTCCGAAATGCGAACCTCCGCAGAAGAATCGCTATGAAAACTACAAATGCAACTATTGTCCGCGTGCGTTCCGAGTCAACCAGCATTTACTCTGGCACGTATCCAGAGTACATAAAAGTAAAGGAAAAGGGTGTGTAGTTGAGAAAGAAGAGCTCCAACCCCCTTTGAAGTGTTTAAAGTGTCCGCGCGTGTTCAAATTTAAAAGAACCTTAGCTTGGCACAACACTAAAATTCACAATATTCACCACAAAAAACTCGATTATACGTATATATATAAGTGTGGAGAATGTCCACGGATATTTAAATATGCGTCGCAATTTAAGGACCATTTCAAAAGGGTACACAAAGTTAAATGCAGCAAATTGTTTGAATGTCCACAGTGTCCTCGCAAATTTATATACGACACTGGTCTAAAAAGGCATGCAAAAAAGGCTCACCAAGCAAATGACCAAACTCACGATGAGCCATCAGGCGACTCCGACGTCAACTTATCTCAATATGTAGCGATGACTCAAAAACCCAAATGA
- Protein Sequence
- EAHQEFAADTQTRLENSTHRTESRDPDYGVDENHGSDNESNISDISFESNATIKSGVGDSKTTIKSGEREDETRFQSQLKHVHKRSKPSKGVVTSEVQDSFSDTVESTIESTDRINAFPLKCQKCPRAFRSQLKQHIHRRNSPSNSVSHRIEEGETEEPNPIEISDELNNTTRNSSTNLLLNTADHVRGHIDEGKRTAFSIKLKVRDFVSDIVEASLKTANPIDAFSMKCKKCRYAFTSKSQLTTHISSVHRSNESTFLLECSQCSSKFASGSWLKNHENAVHQTKQTDDAAQSSNPSIDGTSLYKCQNCPWEFATTSLLNIHVQANHHELAADTQTLLENSTHLTESRYTNYDVDESYETDIESNISDISFESNGTIKSGERETNTTIESGEREVEIIFQSQLKHVHENTVHLTKLTDTDSDVKVSSQTTKTTDMNRNEATFRCLLCPREFTNSHLLERHRDATHQPALIISDCSAPYKCSLCQQKFATYRLLERHEEMKHKGDKKEADKSDESNDSTQKLDTHSLYKCEKCPLVFQSNANLVHHASMMHKSFDSDRMDDGTFKCRKCHLDIALKSIYVRHFYKFHKSEWSSITYACDICARMFLSHTWLQRHISAAHSNGEKLTAHQSEVRDELPMQCVRCPRKFSNLIRLRRHENASHHSPKCEPPQKNRYENYKCNYCPRAFRVNQHLLWHVSRVHKSKGKGCVVEKEELQPPLKCLKCPRVFKFKRTLAWHNTKIHNIHHKKLDYTYIYKCGECPRIFKYASQFKDHFKRVHKVKCSKLFECPQCPRKFIYDTGLKRHAKKAHQANDQTHDEPSGDSDVNLSQYVAMTQKPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -