Mfac014380.1
Basic Information
- Insect
- Micropterix facetella
- Gene Symbol
- -
- Assembly
- GCA_027564375.1
- Location
- JAOPUG010000090.1:5818228-5821809[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.17 11 7.7 0.0 2 23 54 76 53 76 0.94 2 17 4e-05 0.0026 19.1 1.6 2 23 234 256 233 256 0.95 3 17 0.34 22 6.8 1.1 1 23 265 288 265 288 0.93 4 17 0.0057 0.37 12.4 0.6 1 23 310 333 310 333 0.95 5 17 0.072 4.7 8.9 0.0 5 20 473 488 472 490 0.92 6 17 0.00033 0.022 16.2 1.8 1 23 501 524 501 524 0.96 7 17 0.00068 0.044 15.2 3.7 1 20 556 575 556 577 0.94 8 17 0.00038 0.024 16.1 3.0 2 23 667 689 666 689 0.96 9 17 0.12 7.6 8.2 0.1 2 23 699 721 698 721 0.92 10 17 0.00036 0.023 16.1 0.1 1 23 743 766 743 766 0.95 11 17 0.0011 0.072 14.6 0.8 1 23 881 904 881 904 0.92 12 17 0.0013 0.086 14.3 1.4 1 23 917 940 917 940 0.95 13 17 0.00043 0.028 15.9 0.5 1 23 966 989 966 989 0.96 14 17 0.076 4.9 8.8 6.3 1 23 1002 1025 1002 1025 0.96 15 17 0.031 2 10.1 1.6 1 23 1038 1061 1038 1061 0.97 16 17 0.0029 0.18 13.3 1.7 2 23 1092 1114 1091 1114 0.96 17 17 0.0073 0.47 12.0 0.3 1 23 1120 1143 1120 1143 0.91
Sequence Information
- Coding Sequence
- ATGGAAGTAAGAGAGTCCATATTTGATGCCGAGGAAGCCCTAGTGCGAACAATCGATGCATTCCCGTTAAAATGTCAGAAGTATCCGCGTGCGTTAAAGTTACAATCACAACTAAAACACCACAAGCACAAAACATCCAAACTTAGCAAAGGCATAGTAACGTGTCAGGAGTGTCCGCGTGCGTTCTTATTCAGACCGGAGTTAATAAGACATGTAGCCAAGGCGCACAAATTCAGCAAACGTGAACCTGACTACAGTGTCTCATGCAACAAATGGCCAAGCAAATATTTAATTGTCACCAGGATTAAGCCGCATGAAAATACGGCTCATCTAACCAAACTAAGAGACACTGATTGTATCGACGCATTCCCGTTTAAATATAAGGAGTCTCTGAGTGCATTTAGATTCTACTCGCAAGTAAACCAGTCCACACACAATATAAACAATCCAAGCAACAGCGTATCTCATCGAATTGAAGGAGGCGAAACAAAAGAGCCCAACCCTATTGAGATATCTGACGAATTCAATAATACAACTAGAAAATCTGGCACTAATTTGTTGCTTGACACTGCTGATCACATTCGCGGACACGGTAATGAAGATAAAAGCACCACTCTTCCAATTAAATCTAAAGTACGAGATTTTGTTTCTGATTCCAATGAAGCCTCAGTGGAAACAGCTGATAGTATCAATGCATTGAAGTGTGAGAAATGTCCGTGCGCGTTTACGTCCCAATCGCAGTTGACGAATCATATAACCTCAGTGCACAGGTCCAACGAGAGCAAGTTTTTATTTGAATGCTCGCAGTGTCCATGCAAATTTTTATTCGCCAGCTGGCTTAAGAATCACGAGAATGCAGTTCATCAAATGAAACAAACGGATGACGCACCACAGACAACTAGCACATTAATTGATGATATATCATCGTATAAATGCACGATTTGTCTGTGCGAATTTGTTACATCTTGGCTGCTTAATAGCCATGTAAAGGCAGCTCATCAAGAGTTTGCAGCTGATACGCAAACGCGGCTCGAAAACTCGACGCATCAAACCGAATCAAGAGATCCCCATTATGATGTTGATGAAACCCATGGAACTAACAATGAATTCAACATTAGTGGTATATCTTTCAAATCCAATACTGCTATAAAATCTGGAGTGATAGACTCCAAAACTACTATAAATACTGGAGAGAGAGAAGTTGAAACTAGATTCCAATCGCAATTAAAACATGTACACAATAGAAGCAAACCAAGCAATGATGTAGCAACATCTGATGTCCAAGATTCTTTTTCAGATGTCGTTGAACCCACGATCGAATCCACTGATCGTATCGACGCATTCCCGTTACGATCCCAAATAAAACAACATGGCCAGAATACATACGAACGTAGCATTGACATAGTAGAGAGTCAGGAGTGTCCGCGCGCATTCACATTCAAATCGGACTTGGAAACGCATGTAGCCGAGGCATATCAATTCAGCAAACGCGAACATCGTTTTAATTGTGGAAAGTGTCCACGTACGTTCAAGTATAAAATTACATTATTTAGGCACTTAACCATGGATCACAATATTAAACGTGTGCACACCTGGCAGAAGCAGCATAAAAATATAGCTCATCCAACCAAACAAACAGGTACTGACCATATTGACTCACTGCCGTTCAAATGTCAGAAGTGTCCACGTGCGTTTAGGTTCAGATCGCAATTAAAACAACACACACACAAAAATAACAATCCAAGCAACAGCGTATCTCATCCAATTGAAGCAGACGAAACAGAAGAGCCCAACCCTATTGAGATATCTGATGAATTAAACAATACAACTAGAAATTCTAGCACTAATTTGTTACTTAACACTGCTGATCACTTTCGCGGACACGTTGATGAAGGCAAACGCACCGCTCTTTCAATGAAGCTTAAAGTGCGAGATTTTGTCTCTGATATCGTTGAACCCTCTCTTAAAACAGCTGATCCTATCGATGCATTCTCAATGAAGTGCGAGAAATGTCGATGTGCGTTCACGTCCAAATCGCAGTTGACGAGTCATATATCGTCAGTGCATATGTCAAACGAGAGCACGTTTTTATTGGAATGTTCGCAGTGTCCAAGCAAATTTGCATCCGGTAGCTGGCTTAAGAATCACGAAAATGCAGTTCACCAAACGAAACGAACAGATGACGCGGCACAGACAAGTAATCCATCAATTGATGGTACATCGTTGTATAAATGCCAGAATTGTCCGTGGAAATTTGCCACATCTTGGTTGCTTAATATACATGTACAGGCGGATCATCAAGAGTTGGCAGGCGATACCCAAACGCTGCTCGAAAACTCTACACATCAAACCGAATCAAGAGATTCCAATTATGATGTTGATGAATCCTATGAAACTGACAATGAATCCAACATTAGTGATATATCTTTCGAATCCCACGGTACTATAACATATGAAGAGAGAGACTCTGACATTACTATAGAATCTGGAGAGAGAGAAGTTGAAATTAGATTCCAATCACAATTAAAACATGCACATGAAAATACGGTTCATCTCACCAAACTAACAGGCACTGACTCTGACGTCAAAGTATTCAGTCAAACAACAAAAACAACTGATATGAATCGAAATGAAGCAATGTTTAGATGTCTGCTATGTCCAAGAGAATTTGCTAACTCTCACTTGCTTGAAAGGCACAGAGATGCGACTCATCAACCTGCACTGATTATTTCTGATTGTTCAGCTCCTTACAAATGCTCGCTATGTCAGCAGAAGTTTGCAACGTATCGGCTGCTTGAGCGCCACGAAGAAATGAAACACAAAGGTGACAAAAAAGAGGCTGATAAATCTGATGAATCCAATGACCCGACTCAAAAACTAGACACTGACTCTCTGTATAAATGTGAAAAGTGTCCACTTGTTTTTCAATCGAATGCGAATTTGGTCCATCATGCATCCATGATGCATAAATCTTTTGACTCCGATCGCATGGACAACGGCACATTCAAATGCCGAAAGTGCCATCTCGATTTTGCATTCAAATCGAGTTACATGCGACACCTATACAAATTTCATAAAAGCGAATGGAGCAGCGTCACATCGCGCAAGACCTACGAATGCAGATTTTGCAATCGCAAGTTCTTTCTAGAATTATATCTCAAAGCTCATTTAAGAATCAGTCACCTGACCGATTTTGAGCCTTCGCTCGACGTCGGAAAACCGGCCATTCACACCCACTCGCAATACACAGTGATGGGTCTCGAAAAAACGGTCAAATGCTCACATTGCACGTCATTGTTTAGTTCTCAGAGTAGCCTGCAAAACCACGTTGAAACTGTGCACGTAAAAGCGAAGAAATATCTGTGTAATAGGTGCAGCATCAGTTTTTCGAGGCTAGAGTTTTTAAACTGGCATATCATCGATTCGCACAGCGATATATCAATATCAACAATTCAAATCATCCAACTATCATGCATATTATGCGAGATAGACCTAGATATATATCAAACCGCGTTCCCCAGAACTGAACGTAAGCCGCATCTGTATTCATGTACGAAATGTACGCTTAATGTAAATTCATAG
- Protein Sequence
- MEVRESIFDAEEALVRTIDAFPLKCQKYPRALKLQSQLKHHKHKTSKLSKGIVTCQECPRAFLFRPELIRHVAKAHKFSKREPDYSVSCNKWPSKYLIVTRIKPHENTAHLTKLRDTDCIDAFPFKYKESLSAFRFYSQVNQSTHNINNPSNSVSHRIEGGETKEPNPIEISDEFNNTTRKSGTNLLLDTADHIRGHGNEDKSTTLPIKSKVRDFVSDSNEASVETADSINALKCEKCPCAFTSQSQLTNHITSVHRSNESKFLFECSQCPCKFLFASWLKNHENAVHQMKQTDDAPQTTSTLIDDISSYKCTICLCEFVTSWLLNSHVKAAHQEFAADTQTRLENSTHQTESRDPHYDVDETHGTNNEFNISGISFKSNTAIKSGVIDSKTTINTGEREVETRFQSQLKHVHNRSKPSNDVATSDVQDSFSDVVEPTIESTDRIDAFPLRSQIKQHGQNTYERSIDIVESQECPRAFTFKSDLETHVAEAYQFSKREHRFNCGKCPRTFKYKITLFRHLTMDHNIKRVHTWQKQHKNIAHPTKQTGTDHIDSLPFKCQKCPRAFRFRSQLKQHTHKNNNPSNSVSHPIEADETEEPNPIEISDELNNTTRNSSTNLLLNTADHFRGHVDEGKRTALSMKLKVRDFVSDIVEPSLKTADPIDAFSMKCEKCRCAFTSKSQLTSHISSVHMSNESTFLLECSQCPSKFASGSWLKNHENAVHQTKRTDDAAQTSNPSIDGTSLYKCQNCPWKFATSWLLNIHVQADHQELAGDTQTLLENSTHQTESRDSNYDVDESYETDNESNISDISFESHGTITYEERDSDITIESGEREVEIRFQSQLKHAHENTVHLTKLTGTDSDVKVFSQTTKTTDMNRNEAMFRCLLCPREFANSHLLERHRDATHQPALIISDCSAPYKCSLCQQKFATYRLLERHEEMKHKGDKKEADKSDESNDPTQKLDTDSLYKCEKCPLVFQSNANLVHHASMMHKSFDSDRMDNGTFKCRKCHLDFAFKSSYMRHLYKFHKSEWSSVTSRKTYECRFCNRKFFLELYLKAHLRISHLTDFEPSLDVGKPAIHTHSQYTVMGLEKTVKCSHCTSLFSSQSSLQNHVETVHVKAKKYLCNRCSISFSRLEFLNWHIIDSHSDISISTIQIIQLSCILCEIDLDIYQTAFPRTERKPHLYSCTKCTLNVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -