Basic Information

Insect: Micropterix facetella
Gene Symbol: -
Assembly: GCA_027564375.1
Location: JAOPUG010000384.1:16846790-16860213[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0052 0.34 12.5 1.6 2 23 209 231 208 231 0.96

2 11 0.0012 0.075 14.5 2.1 3 23 235 254 234 254 0.97

3 11 1.6e-06 0.0001 23.6 2.4 1 23 260 282 260 282 0.96

4 11 0.0034 0.22 13.1 0.6 3 23 296 316 295 316 0.97

5 11 0.00014 0.0087 17.5 0.8 1 23 322 344 322 344 0.99

6 11 1.2e-06 8e-05 23.9 1.8 1 23 350 372 350 372 0.99

7 11 2.5e-06 0.00016 22.9 0.5 1 23 378 400 378 400 0.98

8 11 4e-05 0.0026 19.1 0.5 1 23 406 428 406 428 0.98

9 11 0.0009 0.058 14.9 0.6 2 21 433 452 432 453 0.92

10 11 0.00075 0.048 15.1 1.8 1 23 460 482 460 482 0.97

11 11 0.013 0.82 11.3 0.1 1 23 502 524 502 524 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0052	0.34	12.5	1.6	2	23	209	231	208	231	0.96
2	11	0.0012	0.075	14.5	2.1	3	23	235	254	234	254	0.97
3	11	1.6e-06	0.0001	23.6	2.4	1	23	260	282	260	282	0.96
4	11	0.0034	0.22	13.1	0.6	3	23	296	316	295	316	0.97
5	11	0.00014	0.0087	17.5	0.8	1	23	322	344	322	344	0.99
6	11	1.2e-06	8e-05	23.9	1.8	1	23	350	372	350	372	0.99
7	11	2.5e-06	0.00016	22.9	0.5	1	23	378	400	378	400	0.98
8	11	4e-05	0.0026	19.1	0.5	1	23	406	428	406	428	0.98
9	11	0.0009	0.058	14.9	0.6	2	21	433	452	432	453	0.92
10	11	0.00075	0.048	15.1	1.8	1	23	460	482	460	482	0.97
11	11	0.013	0.82	11.3	0.1	1	23	502	524	502	524	0.98

Sequence Information

Coding Sequence: ATGTCGTCAGCTGCTTTACTCGTTGCAAATGCACAAGAAATCAACTTTGATAACGTCTGCCGCGCCTGTTTGAGCGCTAAACCCGGTCTTCAACCGATTTTCGGCGCGAGTTTGAATGATATGCTTACAGCCGTTACCAGAATCGAAGTTCAACAGGGAGACGAATTGCCTCAGAAACTCTGCGTTCAGTGTGTCCTGCAGATTAGTAGATCGTACACTTTCAAGCAGAATTTTATCAAGTCCGATGCGATTTTGAGAGCTCAGTTGCTGAGAAAAAAAGCCCTGAAAGCGGCAGAAGCAAGCCAAACCACATCTGGTCAAGTAAATAGTCAGCCTATTTTAAATAATTTTACAAATGTTCCTATCATAAGACAAAATTCCAAAGAAGCTAGTGTGATAGGTGCGGATAGTTTTGATGCAATCAATTTAGAAAATTCACAAAAGATTGTACCCAACGATCACTGCTATAATCGATTTGAAGTATCGCAAGTACCGATGGAAATCCAAGAGTCCGCTATAACCGCTAGAGATAGAAGAGACGAAATATTTGATTCGAATTTCAATAACCTCCATTGTTTGGGCGAATTGACCGAGTGTGATTTGGGCAATGATCATTCGCATATCGTTTGTCAAAAATGTCAGTGCACGTTCGAATCGTCTCTGCAACTGCAAATTCACACATCGACTGTTCATTCGTCCGCTTGTCATGTATGCGGCAAAAAATACACTGATACCGCACTCAAGCGTCATCTCAAGACTCATCTCGAAGTTAAGCCGTACCTTTGCGATCTGTGCAATCGTTCATTCGCCGATAAGTCGAACCTTAAGAAGCACTTCAGGAAACATACGGGGGAAATGAAAAAGATGAAAGGGAAATATAACCTCTGCAGCGTATGCGgcaaacaattcaagtgggcgagctctctggcgaaacatttcaaataccacactggccacaaactatacaagtgtcagtactgctcgaaggagtacgcggaggcgcagtcgtttaatatacacattcgttcgcacactggcgagcgtccgtacgtctgtacagaatgcggaaatggcttcacgcaaaagtgcagtctcgagaagcacatgcgggtgcacacgggtgaaaagccgttttcgtgcagcgtctgctccaggtcattttcccaacagagctatgttgccgtccatatgaggatacatacgggcgagaagccgtatatttgtaaagtttgtaataaagGTTTTACGAGTTGGAGTATACTAAACAGCCACAAGAGAATACACAAGAAAACCTTACCATGCTCGAACTGCCAAAAAATGTTTGCGACTCAAGAAGCACTCGAGAATCACAAGTGTTCACAAAATCAAAACAAACAACACGTTTGCCTGTCTTGTGGAAAAGGTTTCCAAACAATGGACCGTTTGACTACACATATGCAAACGCATTCTTCTGAAGAGACAGTGCAACTGCAAGCGATGCAGGATTTGGCGGATGGAGTTGAATTTCAGTGCGGATTGTGCGGACAGTCCTTTCTGGGAAACGAAGATTTGGTGGGTCATCTTAAATCGCATATCGAAGAGAATTAA
Protein Sequence: MSSAALLVANAQEINFDNVCRACLSAKPGLQPIFGASLNDMLTAVTRIEVQQGDELPQKLCVQCVLQISRSYTFKQNFIKSDAILRAQLLRKKALKAAEASQTTSGQVNSQPILNNFTNVPIIRQNSKEASVIGADSFDAINLENSQKIVPNDHCYNRFEVSQVPMEIQESAITARDRRDEIFDSNFNNLHCLGELTECDLGNDHSHIVCQKCQCTFESSLQLQIHTSTVHSSACHVCGKKYTDTALKRHLKTHLEVKPYLCDLCNRSFADKSNLKKHFRKHTGEMKKMKGKYNLCSVCGKQFKWASSLAKHFKYHTGHKLYKCQYCSKEYAEAQSFNIHIRSHTGERPYVCTECGNGFTQKCSLEKHMRVHTGEKPFSCSVCSRSFSQQSYVAVHMRIHTGEKPYICKVCNKGFTSWSILNSHKRIHKKTLPCSNCQKMFATQEALENHKCSQNQNKQHVCLSCGKGFQTMDRLTTHMQTHSSEETVQLQAMQDLADGVEFQCGLCGQSFLGNEDLVGHLKSHIEEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -