Basic Information

Insect: Micropterix facetella
Gene Symbol: -
Assembly: GCA_027564375.1
Location: JAOPUG010000276.1:13003763-13005160[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00054 0.035 15.6 0.0 1 21 55 75 55 76 0.96

2 14 0.006 0.39 12.3 0.0 1 23 96 119 96 119 0.94

3 14 4.1e-05 0.0026 19.1 0.0 1 23 125 148 125 148 0.97

4 14 0.0032 0.21 13.1 0.3 5 23 157 176 155 176 0.94

5 14 3.1e-06 0.0002 22.6 0.4 1 23 182 205 182 205 0.95

6 14 3.7e-07 2.4e-05 25.5 2.8 1 23 211 234 211 235 0.97

7 14 6.4e-06 0.00041 21.6 0.9 1 23 240 263 240 263 0.96

8 14 6.5e-06 0.00042 21.6 1.0 1 23 269 292 269 292 0.95

9 14 9.2e-05 0.006 18.0 0.7 1 20 298 317 298 318 0.96

10 14 9.5e-05 0.0061 18.0 0.3 1 23 327 350 327 350 0.94

11 14 0.00041 0.026 16.0 0.2 2 23 357 379 357 379 0.94

12 14 6.4e-05 0.0041 18.5 1.0 1 21 385 405 385 406 0.93

13 14 1 67 5.2 1.1 5 21 417 433 408 434 0.84

14 14 3.1e-07 2e-05 25.8 0.9 1 23 442 465 442 465 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00054	0.035	15.6	0.0	1	21	55	75	55	76	0.96
2	14	0.006	0.39	12.3	0.0	1	23	96	119	96	119	0.94
3	14	4.1e-05	0.0026	19.1	0.0	1	23	125	148	125	148	0.97
4	14	0.0032	0.21	13.1	0.3	5	23	157	176	155	176	0.94
5	14	3.1e-06	0.0002	22.6	0.4	1	23	182	205	182	205	0.95
6	14	3.7e-07	2.4e-05	25.5	2.8	1	23	211	234	211	235	0.97
7	14	6.4e-06	0.00041	21.6	0.9	1	23	240	263	240	263	0.96
8	14	6.5e-06	0.00042	21.6	1.0	1	23	269	292	269	292	0.95
9	14	9.2e-05	0.006	18.0	0.7	1	20	298	317	298	318	0.96
10	14	9.5e-05	0.0061	18.0	0.3	1	23	327	350	327	350	0.94
11	14	0.00041	0.026	16.0	0.2	2	23	357	379	357	379	0.94
12	14	6.4e-05	0.0041	18.5	1.0	1	21	385	405	385	406	0.93
13	14	1	67	5.2	1.1	5	21	417	433	408	434	0.84
14	14	3.1e-07	2e-05	25.8	0.9	1	23	442	465	442	465	0.96

Sequence Information

Coding Sequence: ATGGATACGCGCTCATACAATAAGTTAATCAACATGAAACTTGAGACATGTTTAGAAATACAGATGGACGAATCGAATTCAGACGATTCCGTGATAGAAACTAAGTCGGAAGAGTTGTATGTGCCGCCGATTGAACATCAGGATCCGTTGGATGATAGGCCTTTTAAATGCGGAAAATGTGGCGGCTCTTTCGCTGATTCTGATAGCTTGGATGCACATTTGAAGTTGGAGAAATGTCTAGAAGAGTCGAAGACTCCACTGATTCAAGATTCTGAGGATAAGCGTTTTATATGTGATGAATGCAGTAATGCTTTTGCTGATGCCGACAGCTTGAGCATGCACGTTAATTGGTTTCATTCGATTCTGAAGAGTTTCCGTTGTTTGGAGTGCGGCCGCGCGTTCATCGACGCTGTAACCTTGCAGGAGCACATCGAAAGCGTACATAAGAAGAGTTACAAGTATACTTGCGGATGCGGGAAGGGGTTCGCCACCAAACAGAGCATGAAGAGGCACGTCGATACTGTTCACAACAAGATTATTAATTTTAAGTGCGCGGAGTGCGAGAAAGAATTCACTACAAACCAGAATTTGAAAAGGCACGTGGATATTGTGCACCGTGAAGCGGTGAACTTTAAATGTAACGACTGCGAGCAGTCTTTTACGACGAATCAGAATCTCAAGAGGCATATAGATACGATACACCACAAAATTCTGAATTATCAGTGCCGCGATTGCTTGCGCGGTTTTACTACGAAGCAGAACCTTCAAAGGCACATCGATTCTGTGCATTTGAAGATCCTGTGCTTCAAGTGTACGGAATGTGAGCGTGGATTCACGACGAAGCAGAATCTTAAAACGCACGTCGATTCTGCGCATTTAAACATAAAGAAATACACGTGCGAGGAGTGCGACAAGGCGTTCGCTCACCACGAATCAATGAAGCGGCACGTGGAATGCGTCCACCGCGGCATCAAAAGCTTCATCTGCAAGGAGTGCGACAAAGCATTCGGCAAACAGGGCACTCTCAGCAAGCACGTTTCAAACGTGCATCTCCGCATCAAAAATGAGGTCTGCTTCACGTGCAGCAAAGCGTTCGGACAGCGAGCCTCTCTCAACCGCCACATCGACATCATCCACAGGGGCATCAAGAACTTTCTGTGCGATCAGTGCAAAAAGGCGTTCCCGCACAAGACCAGCCTGATCAAACACATCCGAAACGTACGCTGCACCAGCGCGCGCTTCGTCTGCAAGTGTGACGCGCGTTTCACAGAGAGAGACGCTTATAAAATACATCGAAAACGTTGCGAGCTCTACCAAAACAAGTATAAATGCGGCGAATGCGATAAAACATTCTCCAAACGGGGAAATCTCAAAAATCACCTGAACGCATCTCATTAA
Protein Sequence: MDTRSYNKLINMKLETCLEIQMDESNSDDSVIETKSEELYVPPIEHQDPLDDRPFKCGKCGGSFADSDSLDAHLKLEKCLEESKTPLIQDSEDKRFICDECSNAFADADSLSMHVNWFHSILKSFRCLECGRAFIDAVTLQEHIESVHKKSYKYTCGCGKGFATKQSMKRHVDTVHNKIINFKCAECEKEFTTNQNLKRHVDIVHREAVNFKCNDCEQSFTTNQNLKRHIDTIHHKILNYQCRDCLRGFTTKQNLQRHIDSVHLKILCFKCTECERGFTTKQNLKTHVDSAHLNIKKYTCEECDKAFAHHESMKRHVECVHRGIKSFICKECDKAFGKQGTLSKHVSNVHLRIKNEVCFTCSKAFGQRASLNRHIDIIHRGIKNFLCDQCKKAFPHKTSLIKHIRNVRCTSARFVCKCDARFTERDAYKIHRKRCELYQNKYKCGECDKTFSKRGNLKNHLNASH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01007577;
90% Identity: -
80% Identity: -