Mfac004460.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Micropterix facetella
Gene Symbol
LOC113510063
Assembly
GCA_027564375.1
Location
JAOPUG010000125.1:5851168-5921797[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 1.9 1.2e+02 4.4 1.4 2 16 71 85 70 95 0.81
2 19 0.0003 0.019 16.4 0.3 1 23 101 123 101 123 0.95
3 19 8.2e-07 5.3e-05 24.4 0.6 1 23 129 151 129 151 0.98
4 19 2.7e-05 0.0018 19.6 1.2 1 23 157 179 157 179 0.97
5 19 6.9e-05 0.0044 18.4 1.4 2 21 187 206 186 207 0.95
6 19 9.1e-06 0.00059 21.1 0.9 1 23 221 243 221 243 0.99
7 19 5.3e-06 0.00034 21.9 0.5 1 23 249 271 249 271 0.97
8 19 0.00016 0.01 17.3 3.9 1 23 277 299 277 299 0.99
9 19 8.1e-06 0.00052 21.3 6.9 1 23 456 478 456 478 0.99
10 19 0.18 11 7.7 3.7 1 23 484 506 484 506 0.97
11 19 0.0032 0.21 13.1 0.1 1 23 511 533 511 533 0.98
12 19 0.00079 0.051 15.0 0.6 3 23 541 561 540 561 0.97
13 19 0.00016 0.01 17.2 2.7 1 23 567 589 567 589 0.95
14 19 6.4e-05 0.0041 18.5 4.9 1 23 595 617 595 617 0.99
15 19 0.0042 0.27 12.8 1.9 2 21 624 643 624 644 0.93
16 19 0.00011 0.0071 17.7 2.0 1 23 652 674 652 674 0.97
17 19 0.00012 0.0078 17.6 1.2 1 23 680 702 680 702 0.96
18 19 2.2e-05 0.0014 20.0 5.8 1 23 708 730 708 730 0.99
19 19 0.00056 0.036 15.5 0.3 1 21 736 756 736 757 0.94

Sequence Information

Coding Sequence
ATGGCTAAATCTAAATCGAAGAAGCGCGAGCCCTCGCTGAAAGAGCTGCAGCGCAAGCTCCACTTATTGTCCGAATTGAAGGCGCAGATACAGGACGACAATGTGGTGATTAAGATCGAGAATGATGATGTGAAAGGCGAAGATTTGTACGATGGCGATTACTCGTTCGGGGAAGCTGATATTTACGCGAAAACGGAGAATTCCGATGTTCAGTGTGGTGTTTGCGATCGGAGCTTCGCCGGAGCGAGGGAACTGCACACACTATTGAAGCACACACGCGCGCATGACGCACGCACAAAGTACATATGTGACACGTGCAAACGGGAGTTTACGTCGAAGGCGGAGCTGCGCGAGCACGTCTCGGCGCATGCGTATGCGCATCGGTTTGTCTGCGACATGTGCGGCCGAATTTTCAAGAGAAAGGACAACCTGGCATCTCACAGACTCACACACACGTCCGAAATGCGTTACGCTTGCGCTTATTGCGACAAGAAATTCAAGTCAAAAAGTGAAGTAAAGTCACACACTCAGGTGCACGTTGGCCGCAGACGCCTGATCCAATGCACCCGCTGCGGGAATATGTTCCGTCACAAAAGCAGCTTAGCTAAGCATATGAGATATGTTTGCGAAGGTCTACGTTCGTCCGAGAATCGAGGAGGTTTTCAATGCTCCGTATGCGGAAGATCTTTCACACTTAAGGCTAGTTTGGACAGACATCGATTGACACATGGAATTCGACCTTCTTTCACTTGCGAACAATGCGGAAAGGTGTTCACACGTCGCTATCTCTTAGTACAACATGAGCTCATACACCAGGGTGTCGTACAGTATACTTGCAACATATGTGGCCGTTGCTTGAGCACAAAGTTCAATAAAAAAGTGCACATGCAGATGCACCGCGATACGCATCCGCTGACATGCGACCACTGCTGTGACGCATTCGCCGTTCGCGATATCCTCAACTGCCACATTTCCGCTCAGCACAAGCCCAAATCGTACCCCGTTGAGACGTTCGACGATGCCACCTTCCACCAAATAGGACCGCGAGGAGAACTCTTGAATGACGGCGTCAGAAACGACAGCGATGAACCAGTCGCAGCCGACGCCGAGGCCATCGCAGCTTTAGAAGAGTCTATCAAGAGAGAGCTGGCAGAGCCTAAAGCGGAAACCAAAGAAATGGTAGAGAAAATCATGGATTTGTCAAGCCCTATTCATAAGACGGTCGACGAAGAGCTGGACGATTTGAAATTTGACACCGATTTGGATATAAAAAATATTAAAGAGGAATGGAGCGGTGACGATTTTCCTCATCTAGAGTCTGCCGACTCTGATGACTGTTACGAACCCGAAAAGGTTAAAGAGGACTATAGCTGCAACCATTGCGGAAAATGTTTTAAGAATAAAGCGAACCGGCGAATACACCTGCGTACACACTCGGACATATACGCGTACGCCTGCCTCGTGTGTACACGCACCTTTAAATGGAAGCGGAACCTCAAATGCCACATGCTCACCCACAGGGGCAAGAACTACCAATGTGATGTCTGCGGGAAATATATTAAGAGAAAACTAGGGCTAATAGAGCATCTGGCAAGGCATGAAGAGATGCCTCAGCGGTGCTGCGATGTGTGTGGACGCGAGTACAAGTCTCTGGGTGCGCTGCGTACGCATATCGCTCGACACAACACCCCGAACAGCTATGTATGTCACATATGCGGAAAGAGTTTCAAGGAGAGGATCACCTTCAACAGGCACAGCTACGTCCACAGCGAAGTCAGGAACTACGAGTGCGACACTTGCCACAAACGATTCAAGCAGAAGCTTAGTTTGAAGCTACACCAAATGACGCATAGTGAGGTGCGCGATAATGAATGTCTACAGTGCGGAAAGTTTTTCAAGCATAGGAACAGCCTCGTTAAGCATTCCAGATATGTTTGTGGTGATGCAGACCGCTTCCACTGTGAAGCTTGCGGCAAGTCTTTCTCATTGAAAGGCAGCTTGGAGCGCCACCGACTTAAACATTCCACCCAGCCGAGCTTCCCCTGCCATCAGTGCGGAAAGGTCTTCAGCCGCAAATACATTCTTGCAAAACACGAATCTATACACGAAGGGACCGTATCCTATAAGTGTCACATATGCCACAAGTCATTCAGCTCGGAATATAATAAAAAGGTCCACATGATGATCCATTTCGAAGTATTCAAGTATGCGTGTGCGACTTGCGGTAAAGGCTTTCGACGCTCCACTCTTTATGAAAGACATCGACAGGACCAATGTAGCAATAATACATTCCAAGAGTACTCCCGTGCAAACGTCGCTCGTAAATCGAGCATGCGATCGACGCTGTGTGACGCTGAGCACAGGAGATGGGACATGTCAACAATGTCCGTAGGAAAAATGGTTACAGAAAATATCAAGAGATACGTACACGATCCAATACAGATGAAATGCAAAAACCGAGCAAATCACAAGCCTTCCAAGGCGCTAAACGGAGTTTACGACCATAAGATTGCCCACGAATCTTTAGCGCGAAATGCAAAGGCCGCAATGATTCGTGTTGATATTTTAGCGTGTTTTTTATTGGCTTCGGTGGCAGACGCACAGACCAATGGACAATTCTGGTGGTTGAACTTGGACACGGCGCCTCCGATGCCTGGCAATAACGCCAAAGTCAAGAATTCAAGGAGTTTTGAAGATATTTTCAAGAGCAATATTACTGAAAAAGTGGAGACTTCGACCAGTGCCACTGCGTTAAACGACCTACTAAACGCGGTATGGCCTGAGCAATATAAGCCCAACGAAATTGAAAGTTCAATCATCAAAGTGCAGAGTAATGTCGAAGATTTTGTTCCGTTCTCCGGCAGCTCGACCAAACCGCCAGGACACAATATTGGCTTCCCGACACAAAATCCTAAGCCGACTACAGAGGACGAGAACGCCGGACGGATCGTTTTCGAAAATTCCGACTATGTGGACTTTTTGAATCCGTACAATTACGAAATTGGCGGGAAAAAGAACGACTTTGTCTCATTTCAGATTTGGAAGTCACCCCTCATAATAACCGACCACATTAAACCAATTTGCCTACCGCCGAATAATCTAAATTTCATTGGAAAAACATGCAAAGCATCCGGTTGGGGCTCAGACGTGGAACAATCGTCCATCAGACAAACTACCCTCCGCGAAGTATCTCTGGAAGTCGTCGAACCCAAAATCTGCGAAGACCGATTAAGAACCACAAAACTCGGGATGAGGTTTCGACTTCATGCTTCGTTCCTATGTGCCGGAGGTGGAAAATACTTAGCGGATACGTGTAAAGGAGATGGTGGGGGACCTTTAGTGTGTCAGGTTGGAGAGCGCTTCTACCAAATCGGAATTACATCTTGGGGCATCGGTTGCGACGGCCTCGTACCGGCTGCTTACACTAATGATCTACGACTTCGTGATGCGGCCATTCAGGAGGGGGCGGAGCAAAGGTTTCTCCGGAATCAAGTACTAATGGAGCAGAATGAATTTTAA
Protein Sequence
MAKSKSKKREPSLKELQRKLHLLSELKAQIQDDNVVIKIENDDVKGEDLYDGDYSFGEADIYAKTENSDVQCGVCDRSFAGARELHTLLKHTRAHDARTKYICDTCKREFTSKAELREHVSAHAYAHRFVCDMCGRIFKRKDNLASHRLTHTSEMRYACAYCDKKFKSKSEVKSHTQVHVGRRRLIQCTRCGNMFRHKSSLAKHMRYVCEGLRSSENRGGFQCSVCGRSFTLKASLDRHRLTHGIRPSFTCEQCGKVFTRRYLLVQHELIHQGVVQYTCNICGRCLSTKFNKKVHMQMHRDTHPLTCDHCCDAFAVRDILNCHISAQHKPKSYPVETFDDATFHQIGPRGELLNDGVRNDSDEPVAADAEAIAALEESIKRELAEPKAETKEMVEKIMDLSSPIHKTVDEELDDLKFDTDLDIKNIKEEWSGDDFPHLESADSDDCYEPEKVKEDYSCNHCGKCFKNKANRRIHLRTHSDIYAYACLVCTRTFKWKRNLKCHMLTHRGKNYQCDVCGKYIKRKLGLIEHLARHEEMPQRCCDVCGREYKSLGALRTHIARHNTPNSYVCHICGKSFKERITFNRHSYVHSEVRNYECDTCHKRFKQKLSLKLHQMTHSEVRDNECLQCGKFFKHRNSLVKHSRYVCGDADRFHCEACGKSFSLKGSLERHRLKHSTQPSFPCHQCGKVFSRKYILAKHESIHEGTVSYKCHICHKSFSSEYNKKVHMMIHFEVFKYACATCGKGFRRSTLYERHRQDQCSNNTFQEYSRANVARKSSMRSTLCDAEHRRWDMSTMSVGKMVTENIKRYVHDPIQMKCKNRANHKPSKALNGVYDHKIAHESLARNAKAAMIRVDILACFLLASVADAQTNGQFWWLNLDTAPPMPGNNAKVKNSRSFEDIFKSNITEKVETSTSATALNDLLNAVWPEQYKPNEIESSIIKVQSNVEDFVPFSGSSTKPPGHNIGFPTQNPKPTTEDENAGRIVFENSDYVDFLNPYNYEIGGKKNDFVSFQIWKSPLIITDHIKPICLPPNNLNFIGKTCKASGWGSDVEQSSIRQTTLREVSLEVVEPKICEDRLRTTKLGMRFRLHASFLCAGGGKYLADTCKGDGGGPLVCQVGERFYQIGITSWGIGCDGLVPAAYTNDLRLRDAAIQEGAEQRFLRNQVLMEQNEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-