Mfac006390.1
Basic Information
- Insect
- Micropterix facetella
- Gene Symbol
- -
- Assembly
- GCA_027564375.1
- Location
- JAOPUG010171901.1:1510-2856[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-10 1.1e-06 29.3 0.0 4 37 18 51 17 58 0.92 2 2 1.4 1.6e+03 -0.1 0.0 22 30 142 150 138 151 0.84
Sequence Information
- Coding Sequence
- ATGTCTCCCAAATATGTAAGAAAGTCACTGCGGGCGTCATGGGCTGCTAGTGATTTAGAAGAAGCCATGAGTAAAGTGAAAAATAAAGAGATGGGCACTAATGAAGCTGCCAGAACGTTCGGCATACCATCGAGAACTCTGAGGAGACATCTCATTTCAGGTAATGCTAAAGGTCCCATGGGTCGAAAACCAGTTTTTTGTCAACAGTATGAGAAAAAACTGGTTGCACACATAAAAAAATTGGAAATGGTAGGATTTGCTCCAGATAGAAAGGACGTTAAAGATATGGCCTATCAATTATCCAAGAAAATAGATGTCAAGAACCCTTTTTCGAAAGAGACACAAGTAGCTGGAAACGTGTGGTATCATGGCTTTATGTCACGTAATTCTGAGCTGAGTGAAAGAAAGACTGAAGGATTGTCACTCGCTCGAGCTTACGGGGTAAACCGTCCAGATGTCAAGGAGTTCTTTGACTTGCTCGAAAAAATTTACATAGAAAACGATATTGCAAACCACCCTGAAGACATCTACAACATGGACGAGTCTGGCATTCAGGTAAATAACAAAGCAGGCAAAGCTGTTGCCACAAAGGGAGCCAAAGATGTTTACACTCTAACAAGCtccgaaaaaggtgataatgtgacagtgattgcatgctgcaatgcacagggaaattttttgccacccgttctcatatataaagggacatacagcaaaccacaattttctgagggacttccacctggatctgaagtgtttatgaacaagaaatcgtcctatatAAATTCCGATCTATTCATGAAGTGGTTCGAAGACGTTTTCTTGCGCCATAAAAGCTCTCGAAAGACGGTTTTGATTTTAGATGGTCACAGTTCTCATAGCAACAACATACGCTTGCTTGAGGTTGCCGCCGAAAATGATGTGACACTCCTCTGTCTTCCAAGCCACACTACACATGCACTTCAACCTCTAGACAGAGCCTTCTTCAGACCTTTGAAAGTGTATTTCGCGCAAGAAGCGAAATCTTGGATGGTAATGAACAAAGATAAAAAGTTGACACGTTACGATGTGTCCAAATTGATCGGAAAGGCTTGGGGCAAGGCTGCTACGGTCTCTAATGGTGTTTCAGCATTAAGATCATGTGGAATTTACCCATTTAACCCCAATGCTATTCCcgatcattactttgcactctcagatgctctaaatgagcaaaatttagtggaaaaaGACCATGATAAAGATGAACGCACTCCATCACCATCGATGCTGGAACTAGACGATCATGACGAAATCGAGATAAATCAGTTCATATTCCAATCACCTGGGCCAGAAACTTTAACATAA
- Protein Sequence
- MSPKYVRKSLRASWAASDLEEAMSKVKNKEMGTNEAARTFGIPSRTLRRHLISGNAKGPMGRKPVFCQQYEKKLVAHIKKLEMVGFAPDRKDVKDMAYQLSKKIDVKNPFSKETQVAGNVWYHGFMSRNSELSERKTEGLSLARAYGVNRPDVKEFFDLLEKIYIENDIANHPEDIYNMDESGIQVNNKAGKAVATKGAKDVYTLTSSEKGDNVTVIACCNAQGNFLPPVLIYKGTYSKPQFSEGLPPGSEVFMNKKSSYINSDLFMKWFEDVFLRHKSSRKTVLILDGHSSHSNNIRLLEVAAENDVTLLCLPSHTTHALQPLDRAFFRPLKVYFAQEAKSWMVMNKDKKLTRYDVSKLIGKAWGKAATVSNGVSALRSCGIYPFNPNAIPDHYFALSDALNEQNLVEKDHDKDERTPSPSMLELDDHDEIEINQFIFQSPGPETLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -