Mfac021167.1
Basic Information
- Insect
- Micropterix facetella
- Gene Symbol
- lola
- Assembly
- GCA_027564375.1
- Location
- JAOPUG010000001.1:11399086-11405629[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-16 5.4e-13 49.5 0.0 1 42 265 307 265 310 0.94
Sequence Information
- Coding Sequence
- AtgtcgatccaacaattctgtttgcgatggaacaaccatcagccgaattttatatccgtgtttacgaccatgttaaacaatgaattcctcgtggatgtcactttgtcggctgaaggaaaacagttgcacgctcataagatcatcctctccgcgtgcagtgtctattttcagaatatctttgctacatatccgaaaaaacacgccatagttataatcaaagatgttaaatacacggacctgcgagtgatagtggattttatgtattacggagagatcaatgtgtccgaggatcagttacctggtgttctggagacggcgcagttgttaaaaataaaagggttgacggagatGCCCGATTCGTCACTGGTTGCGAATACGCATAATAATTTAGCGGAACGATCACTGCCTGAAAGGACATTACCGGAAAGGACGATACCAGAAAGATCATTGCCTGAGAGAACGGACATGCCGTTTGTTTCTCCCGATCATCAGTGGCCCACTCTTGAAGAACAAGGCTACCAGCGGTACTCCAATTTCATCTGCCAGAATATCAATATCGAAAACAACTTGGACTCGGGAAACTTGGAAGATATGCACGGTCAAGAGAGCGACCTAACACTGAACGTTCCACCCATTCTCAATCCGTGCGAATATCAAAACGAGTTATCATCACAAGCACAAAATATGCACAAAATGGAGATGTGTCCGCCGGGGCCATCATGCAACACTTTACCAAATGTGTTGTTTGACCCAAATCCCCCGTTGAAACGCAGACGCAGAAGTAATCCGCAATCCGAGGAAAATTTTCAGCGGGCTCTGGAAGCGGTGCGGTTCGGAGGCATCGGCTTCTGTAAGGCCGCCCGCATGTTCGGGGTAAATAATAGAACGCTGTGGCTAGAATATAAAAAAAAGGGATATCCTAATAACAGGCTAAGCATAACGAACAGAATAAAGCTCGAGCATAGGTCTCCTCCGCCGGAGGTGACGCAGGAACGCGAAGGACCCATTCTTCCTCAAGATCAACAATTACCGATTCTCTGTCCGCCACATTCTTTAGGAATGATAGGTTTTCTCGATCCGCGACCTGTTGATTTCACATCCAATATCCAGAACATTAACAGGGTCCGATTTGGGGACGAACCGAACATAATGGCAAACTCGCCGATCAACCTCAATATGCACGGAGTGAATTTCAATATAATGTAA
- Protein Sequence
- MSIQQFCLRWNNHQPNFISVFTTMLNNEFLVDVTLSAEGKQLHAHKIILSACSVYFQNIFATYPKKHAIVIIKDVKYTDLRVIVDFMYYGEINVSEDQLPGVLETAQLLKIKGLTEMPDSSLVANTHNNLAERSLPERTLPERTIPERSLPERTDMPFVSPDHQWPTLEEQGYQRYSNFICQNINIENNLDSGNLEDMHGQESDLTLNVPPILNPCEYQNELSSQAQNMHKMEMCPPGPSCNTLPNVLFDPNPPLKRRRRSNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRLSITNRIKLEHRSPPPEVTQEREGPILPQDQQLPILCPPHSLGMIGFLDPRPVDFTSNIQNINRVRFGDEPNIMANSPINLNMHGVNFNIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01008624;
- 90% Identity
- iTF_01008624;
- 80% Identity
- iTF_01008624;