Basic Information

Gene Symbol
Arid2
Assembly
GCA_027564375.1
Location
JAOPUG010000105.1:14139736-14214428[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-19 9.8e-16 59.0 0.0 1 89 16 102 16 102 0.95
2 2 4 1.9e+04 -2.8 1.2 26 42 960 976 935 1025 0.58

Sequence Information

Coding Sequence
ATGTCGAAGTTTCACATAAACACGAAATCGGCCACGTACATACGCGACAAAGAGAACTTCATCAAAGACCTGAAACAGTTCTACGAAACTAAAGGAGCGCCGCCGTTCAGAGTTCCTATCTTAAATGGCAAGGAGATCGATTTGTATTTGTTTCATTTGATCGTTTTTCAACGCGGCGGGTGGACAAAAATAACAAATCACGGTGCATCCGAACAGCTGATCCGAGCGCTACAACTGCCAGCAAATTGCCTGAATATCGAGGCACTATTGAAGTGTATATATTCGAAATATCTCGAGCGATACGAGAGGTCAAAGAACCCTCAAGGTAGAGATGAAGAATTTGCTGCTGATATCGAGGATGACTACAGGAGAAGTCGAGGGCCTCCTCGTGTTGTTCAGACCTATACATCTACAGAAAACCATTCCTCCCGCAACTTACCCCGTGTGGCAGGTCCGTCGGAAAGATTGGCTTTATCTCTACTATCCCCACTACCGAACGAACAAGATTTCGCCTTGAATGTTTGCACCGTTTTAGCAGCCGATTCGGCGAATAGATTACCACTGGCTTCTACTCCTCATATTCTAGACTTCCTGCTGGCGCATGCTGGTGATCCATCGACCTGCCTTCTCACAAGGCATCTGTTCTCCTCCATCATGGCAGCTCTTCAATCCGAAGACAGGGCCAGGATTCTCAACGGTTTGGAAATCCTCAACAAACTCGCCCAGAATGATCAGAATGAAGATATTCTCCTAAAATGTCTTGAACAAAAGATGTATCATCAAGTGTGCGCCTTCCTTACAATTCACGATATTATGCTGCTCGTGGTAACATTGGAATGCGTATACGCTTTGACTTCATTAGGTGAGAGAGCCTGCGAATACGTTGTGAAAGTGAAAGGACTCGTCGACACCCTCGTTTCGCTTATCACTGTTGAGGCGCAGAGCTACGGTCCAAAAGCGTGTATCCTGATGCGAGTGGTGGAGACCGTGGCTGGCGCCGGGGGGACTGCGGTGGGCACTCCGGGGGCTCCGGGGACTCCAGCGGCGACCCCAGCAGCCCCCGATACTCCCTCCAAGGCCCGCCTCGGTGCCGCCTCTCCGGCCCCCCTGCACACTTACGAGCGACATCACACACAGCCGCAACAGCAGCAGCCGCAACAGCAGCAACTTACAACAGTACAGCCGGTTTTGAAAAGTCAAGATGAGTTGACCCCGGTCGCGAGTACTCCTCCTAGTCTTTTCAGCACTCCGTCCACTCAAACGACCGTACGCCAGAACGTTTCGGAAACAAAACCCACCGCCTTCTCAGTTCAACAGCAACATGCTCATCAACAAGCTATACAAGAGGTGAATTTTGTGTTTATACGGGCGAGTCCTAGGCAAACACATTTGGAGGGCTTCACCTTTATACAACCAGGCCAGTCAAAGAATAACTCTACTTTCTATAATAGCAGAGAAAGCTGCTTGGGGCTCCTGGTGATGAATGTCGGTCGTCGGCAAAAGCGAGGCCCGACGAGGTCTGTCTTTGGTGGTATGATTGGCCCTAATGCTGTAAAAACTTCGACCGGAGATATGCAACAACACTACATCGGGATCAAAATGAGACCAAATGCAGCAAGCATGCAATCAAAGACCAATACTCCCACATCAACAGTCAAACAATCTGGACCTTCTTCGCCTATTCTCAAAGCTCAACTGAGTAAACTGGAACAGAGCAAACAACAGCAGGCAGCGAACCCACACCCTCACTTGAGTCAGGCGTTGACAGAGGCGCCTTCGCCAGCCCCGACTGGATCCAGCCAGGTCTCCTCTTCGCAGGTCATCGTCAGCCCGGCTTCTTCTTCTTCTCCGGCTGCTTCTTCTACCCAGCCGCCCGCCACCAACAACACCTCGCTCATCAAACACTTACTCGCGCACAAGGTTGAACCCATCCTCGCTAGAAATACCCAGGTGGCTCAGCGTCAGAACCAGCAGAGAATGCTTGGCCAACAAGGTACACAACCCGTTCAGCCGCAGCGTATTTCTCCGACAAATTTGGAGGATCCCGAAGCGCTGATATCATGTAGCACAATCACATCGACTGGAGTCACTAGCACTTCTCCTCTACTGCCTACTCAGTCCATGAAGGTACCGCCAGTCGTAACACAAACATCAACTGTCAGCAACCAGCTTGAGGAAGCTTTGGACAGTACAAAGAAGGAACTAGAAGAAGCACCTCATAATAGTAACATGCAACAAAATAAGATGCTGGCCGATTTATTAGAGAAGAAATCTTCACCACCCATGCCCAACAATCCCGGTCAGCTACCAGTCATTCTTAATACATTTACTGTAAAGGAAGAAAACAATTTGGAAGAAAAAGAAGCCAGCGCTGCTATTAAACAAGAATCTGATGAGCCACCTGCTAAGAAAATGAAGAAAGAGGAATCAGTCTCTACAACGGCTGCAAATCTATATGCTGCATTAGCCGCTTCCGCTTTAGAAGATGAAGAAGATTTGGCCCAACAGCAAGCGCAAATGGCTCAAAACCGAGAGGCGAACTCAAGCCGTCAACCTCAACAGATAAGCGTACGCCCGCCCCAGCCGACTACAATAATCCAACAGCCGAACGTACAAACTGCGCAACCCACCTTCCAACAGACGAGCCTCATCCAGCATACGCAGCAAGTGCAGCCACCCATTTCCGCGATCCAGACCATCCAGACGCAGAAACCCGCCATCCAACCGAACGTCCAAGCGAGCGTCCCTTCAAGCCTTCAGCAGAGCATCCAGCAGAGCAACGTGATGAAGCAGAACGTGCAGCTGCAGCAGACAGCGATTCAGCTGCAGCAGGGCAATCTGCTGCAGCAGCAGAATATGCAGCTCCAACAGGTGCAGGTTCAGCAGCAGCCCATGCAGGTAGTGCAGGTGCAGCAAAACGCCATGCAAATGCAGGTGCAGCAGATACAGCAGGCGTTGCAGGTACAGCAACAACCGATCCAAGTACAGATCCAGCAGCCAACTATGCAGATGGCTGTACAACCGACAAATGTTCAAGTGCAACAAATGGATATGCAACTTCAGCAGATTGGCGGCCCCACCGGACAGATTATTCTACAAGAGAAACAAGTTATCCAAAATCCTCAATACTTATCTCAGCAGCCAGTACAAATTATAGCAACACCAAATACAACACAGACTAATTTCGGATACATTCCTGGAGGAAATGTTCCACATAAAACCATAATAATTCTACAGGGCAGTGCACACAATACGCCAATCACTCTAACGGTAAACAATTCAGCCGGTCTCGATGAGAACACGTTAAATTCAATCATATCGCAAGCCAGCGACGCAATCAGCCAACAACACGCACTGGGGCAGAACCAGGTATCTTGCAGCCAGAAGGCCATAATAAGTCAGCAGCCCCAAGCGCAGAAACCTCAGCAGATTGTCATGACTCAGGCGATGCCTGCACTCGTCAGTACAGGACAAACCCTCGCCCAGGCGCCAGGACAGGTTGTAATGGCGGGGCAAACAATCGTCACACAGAGTCAGCAGGTTATAACCGTAGATGGCAAACAGATAATGGTGAACCGTCAGATAGCTTCGCAGCCGACGCAGCCAGTGCAAGTGCGCCCCGCCCAACAAAATCAAACCGCCAATCAGACGATGCTGCAGAACCAGATCAACCAAAACATTCAGCAGAACATTCTGCCGCCCGGACGGCCAGTCTTGAACAAGCAGCAGACCGTGATTGGCATTCAGAAGATGCCTGCAGAGAAAATCAACCCGCCGGTCAGCACAGGGGTCGTCGTCATGAAGAACGAACAGCCCGCGGATACTTCCCAAATGGTGACTTCTTCGTCCACCTTATTTTAG
Protein Sequence
MSKFHINTKSATYIRDKENFIKDLKQFYETKGAPPFRVPILNGKEIDLYLFHLIVFQRGGWTKITNHGASEQLIRALQLPANCLNIEALLKCIYSKYLERYERSKNPQGRDEEFAADIEDDYRRSRGPPRVVQTYTSTENHSSRNLPRVAGPSERLALSLLSPLPNEQDFALNVCTVLAADSANRLPLASTPHILDFLLAHAGDPSTCLLTRHLFSSIMAALQSEDRARILNGLEILNKLAQNDQNEDILLKCLEQKMYHQVCAFLTIHDIMLLVVTLECVYALTSLGERACEYVVKVKGLVDTLVSLITVEAQSYGPKACILMRVVETVAGAGGTAVGTPGAPGTPAATPAAPDTPSKARLGAASPAPLHTYERHHTQPQQQQPQQQQLTTVQPVLKSQDELTPVASTPPSLFSTPSTQTTVRQNVSETKPTAFSVQQQHAHQQAIQEVNFVFIRASPRQTHLEGFTFIQPGQSKNNSTFYNSRESCLGLLVMNVGRRQKRGPTRSVFGGMIGPNAVKTSTGDMQQHYIGIKMRPNAASMQSKTNTPTSTVKQSGPSSPILKAQLSKLEQSKQQQAANPHPHLSQALTEAPSPAPTGSSQVSSSQVIVSPASSSSPAASSTQPPATNNTSLIKHLLAHKVEPILARNTQVAQRQNQQRMLGQQGTQPVQPQRISPTNLEDPEALISCSTITSTGVTSTSPLLPTQSMKVPPVVTQTSTVSNQLEEALDSTKKELEEAPHNSNMQQNKMLADLLEKKSSPPMPNNPGQLPVILNTFTVKEENNLEEKEASAAIKQESDEPPAKKMKKEESVSTTAANLYAALAASALEDEEDLAQQQAQMAQNREANSSRQPQQISVRPPQPTTIIQQPNVQTAQPTFQQTSLIQHTQQVQPPISAIQTIQTQKPAIQPNVQASVPSSLQQSIQQSNVMKQNVQLQQTAIQLQQGNLLQQQNMQLQQVQVQQQPMQVVQVQQNAMQMQVQQIQQALQVQQQPIQVQIQQPTMQMAVQPTNVQVQQMDMQLQQIGGPTGQIILQEKQVIQNPQYLSQQPVQIIATPNTTQTNFGYIPGGNVPHKTIIILQGSAHNTPITLTVNNSAGLDENTLNSIISQASDAISQQHALGQNQVSCSQKAIISQQPQAQKPQQIVMTQAMPALVSTGQTLAQAPGQVVMAGQTIVTQSQQVITVDGKQIMVNRQIASQPTQPVQVRPAQQNQTANQTMLQNQINQNIQQNILPPGRPVLNKQQTVIGIQKMPAEKINPPVSTGVVVMKNEQPADTSQMVTSSSTLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-