Basic Information

Gene Symbol
Kdm5
Assembly
GCA_027564375.1
Location
JAOPUG010000152.1:31092785-31095202[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-22 5.7e-19 69.3 0.0 3 89 94 175 92 175 0.94

Sequence Information

Coding Sequence
ATGGATCCGACGTCGATTTTAAAAAAGGCGATCGCGAATAGTGTCGAATTTAATTTCACGCCGCCCCCCGAAGCGCCAGTATTCGAGCCCACTGCCGAGGAGTTCGCCGACCCGCTCGCATATATCTTCCGCATCAAGAGCGTCGCGGAAAAGTCTGGAATCTGTAAGATCAAACCGCCGAGCGGGTGGCAACCGCCCTTTTCTCTCGACGTCGACGAGCTGCGCTTCATTCCCAGGATACAAAAGATCAACGAGTTAGAAGCCACCACCCGCCTCAAGCTCCACTTCCTAGAGCGGCTTCTGAAGTTCTTCGAGCTCCAAGGACATCCCTTCAAAATACCCACCGTTGAAGGCAAATTACTCGACCTATACTGCCTACACTTTTGGGTGGAACAGGAAGGCGGATACGAAGAATGCACAGCGAACAAAAGATGGAAGGCAGTGTGCTCGAACATGGGCTTCGGCCCCACTACGATGATAACAACTATCAAAATGCACTACGAACGCATCCTTATGCCGTACGACGAATTCCAAAAGAAAAATCTCGAAGCAAAGAAGGAAATCAAAATCGAAAAGAAATCAGAGAATGATACCGGATATTTCAAAGAAGTCAATATCGAGGCGATTCCCAAAATTGATTTGACGGGAAGCGATGAAGAATTCATTCACATCAAAAAAGAGGCGGCAAAGAGCCACATCCAAAAGACTAAGACTGGGTCGGATATTAAAAGCGACGTCGATACGGAAGCGAATAAATGCAGCCGCGAGTTGAAGCGGTTGCAGTGTTTTGGCGCTGGGCCTAAGATGCCCGGCTGCACCGGTGCCCCCGTCCCGGATGAAGAATTAGACCTCTATGCTAAAGTTCGCAAACGGGCCAAACTCGAACTCGACCCGCTCGCAATCCACTTTTGTAAACTTTGCGAAAAGGACCACCGTGATGACCAAATGCTTGTGTGCACTGCATGCTTTGATACGTATCACACGTTCTGTTTAAAGCCACCGCTGACGATAATTCCCGACGGGGACTGGCGCTGCCCTCCCTGCATCGCAAAAGAAATTAATAAATCCATGGAGGCTTACGGATTTGCGCAAGCCGATAGGGAATACTCGTTGCAGGAATTTGGCGTGATGGCTGATAAGTTTAAATATGAGTATTTCGGGCGTCAAGGGCACGACGTCTCCGCCGCTGAGGTTGAGCGAGAGTTCTGGAAAATAATCAGATCGACCGATGTGGATGTGACGGTTGAATACGGGGCGGATTTACACTCGATGGATCACGGCTCCGGATTTCCCACACAGAACTCTGTGAATCTAGATGAAGGCGATCGGGTATATGTTAATTCCGGCTGGAATCTAAATAACATGCCGGTGTTAGACGGATCTGTTCTGCGGTATATCAACACTGATATTTCCGGAATGACAGTACCGTGGATGTATGTCGGTATGTGTTTTTCAGCATTCTGCTGGCACAATGAAGATCACTGGAGCTACTCCATAAACTTTCTCCATTGGGGAGAACAGAAGACTTGGTACGGAGTGCCCGGTAGTCAAGCGGATCTTTTGGAGAAGACGATGAAAGCGGCCGCTCCAGAGTTATTCCAGACTCAGCCAGATCTGCTGCATCAGTTGGTAACGATCATGAATCCGAACTTGTTGATGGATCTTGGCGTACCGATCTATCGGTTGGATCAAGGCCCAGGCGAGTTCGTGGTCACGTTTCCGAGAGCTTATCACACCGGTTTCAATCAGGGCTATAACTTTGCGGAGGCGGTTAATTTTGCACCGGCCGATTGGCTCCCAGTCGGGCGGGAGTGCATTCTGCATTACAAAAAACTGGGGCGCTTCTGCGTGTTTTCGCATGAGGAGTTAATTTGTAAGATGGCTCTGGAAGGCGATCGGCTCGATCTAGCTGCCGCTTTAAATACGCACGCTGAACTGTCCATTTCGACCAACGAAGAAGGTAGTTTGAGGACGGCGCTCCTGGATAGGGGCGTTCATAAAGTGCGGCGCATCGCGTTTGAGACTCTCCATGATGACAAGCGCATCTGCGAAGTCTGCAAAACGACTTGCTTCTTATCCTCAGTGTACTGTAAGGAGTGCAACGTGATGGTCTGCCTGTCCCACGCAGCCGGAATGTGCTCCTGCTCTGTGGATAATTTAACATTGAATTATCGCTACGATATGGACGAGTTGCATATCATGTTGCAAACACTAGAGTTCCGTATAAAGAGTTTCGACAATTGGATGACGACGGCAAAGCAGCTGCTTTCCGCCGACGATATCGATTTGGAGAAACTGGCAAAAATAATAGAAGAAGCGAACGAAATTAATGTACCGAAGTGTAACTTATTGAACACGTTGATAGATAAGCAGCGGAAAGCAAATGACGTACACGAAGTAATTGTGATCGACGATTAA
Protein Sequence
MDPTSILKKAIANSVEFNFTPPPEAPVFEPTAEEFADPLAYIFRIKSVAEKSGICKIKPPSGWQPPFSLDVDELRFIPRIQKINELEATTRLKLHFLERLLKFFELQGHPFKIPTVEGKLLDLYCLHFWVEQEGGYEECTANKRWKAVCSNMGFGPTTMITTIKMHYERILMPYDEFQKKNLEAKKEIKIEKKSENDTGYFKEVNIEAIPKIDLTGSDEEFIHIKKEAAKSHIQKTKTGSDIKSDVDTEANKCSRELKRLQCFGAGPKMPGCTGAPVPDEELDLYAKVRKRAKLELDPLAIHFCKLCEKDHRDDQMLVCTACFDTYHTFCLKPPLTIIPDGDWRCPPCIAKEINKSMEAYGFAQADREYSLQEFGVMADKFKYEYFGRQGHDVSAAEVEREFWKIIRSTDVDVTVEYGADLHSMDHGSGFPTQNSVNLDEGDRVYVNSGWNLNNMPVLDGSVLRYINTDISGMTVPWMYVGMCFSAFCWHNEDHWSYSINFLHWGEQKTWYGVPGSQADLLEKTMKAAAPELFQTQPDLLHQLVTIMNPNLLMDLGVPIYRLDQGPGEFVVTFPRAYHTGFNQGYNFAEAVNFAPADWLPVGRECILHYKKLGRFCVFSHEELICKMALEGDRLDLAAALNTHAELSISTNEEGSLRTALLDRGVHKVRRIAFETLHDDKRICEVCKTTCFLSSVYCKECNVMVCLSHAAGMCSCSVDNLTLNYRYDMDELHIMLQTLEFRIKSFDNWMTTAKQLLSADDIDLEKLAKIIEEANEINVPKCNLLNTLIDKQRKANDVHEVIVIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01006812;
90% Identity
iTF_01006812;
80% Identity
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