Basic Information

Gene Symbol
ARID4B
Assembly
GCA_027564375.1
Location
JAOPUG010000010.1:18105158-18173743[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-26 8.2e-23 81.6 0.1 1 83 357 437 357 438 0.95
2 2 0.14 6.6e+02 1.8 0.0 11 49 577 614 568 634 0.73

Sequence Information

Coding Sequence
ATGGTTTCGAATAATATTCCGACTCCAATAGCTTTGGTAATGGCTGGTTTAAAATGGCGCTATTTACAATTGGAGAATACTTTTTTTACAATATGGCGCACGTTCTTTAGTTCTGAAATTCTAAGCGGATTTCAGCTGGGAGCTGCGGAAAGTCATTGGTGCATGAAGAGCGAGTCTGTTGACAACGACGATCCGGCGTTTCTTTCAGTCGGAACGGATGTTAGTGCCAAGTATAAAGGGGCCTTTTGCGAGGCGAAGATCAAGAAAGTAGTGAAGAATATCAAATGCAAGGTAACGTTAAAAAGCGGTGGTGGAGGTACGTTGATGGTGCCAGATGATGCTATTAAAGGGACGCTTCGTGTGGGAAATACTGTGGAAGTGCGAAATGAAGCGAAGAAGGAAACTGTTGAAGCTATTTTGACTAAAATTCAGGATTGCAGTCAATACACTGTCGTGTTTGACGATGGTGATATAACAACGTTGAGGCGGTCTGCCCTCTGCTTAAAGAGCGGAAGACACTTTGCCGATGGGGAGACTCTCGATCAGCTCCCGTTGACGCATCCTGAACACTTCTCATCTCCTGTCATCGGACATAGTGCTGGACGGCGGGGCCGACGGACTCAGAGGACTCAGTCGGAGGAGAGCCGTTCGTGGGAAGGCGAAGGCTGGGCGCCGGTCCGCGAGCGGGAGCCCCACGCGGGCCGCGTAGTACTGGTGGAAGTAGGCGCGGGGGGCTCCCAAGAGCGGCGCCGGCCGCAGCATCAGTGGTTTCCTGGACTTGTCGTAGCTCCAACGGCACAGGATACCGTCAAGATACGTATCGAAGACGACTACCTCGTGCGCTCCTTCAAGGACGGACGATACTACACCGTTCCCAAGAAGGAAGCCCGCGAGTTCAAAAAAGGCAGCGGTCCTCAAGATGTCGCTGGGATTGAAGCGGCTTTGCAGTATTTAAATGGTGGTGTTTTGCCTCCGCATTGGGATCGCGATGTGCTCTTTGGCACTGATCAAATCGGGAAGAATGACGATGGCAACTCGGATGATAGTTCAGATGACGAACCCCGCGAGGAGAAAGACCACTTCGTGGCGCAGCTGTACAAATTCATGGATGACCGCGGAACGCCTCTCAATAGACAACCTACCATAGCCAATAAGGATGTCGATTTGTACAGGCTCTTTAAGGTTGTGCACAAGATGGGCGGATTCAACCGGGTGACCAATCAAAATCAGTGGAGAAGCATCGCCGTAAGGCTTGGATTTCAACCCGTGTCAACCAGTGTTACTAATCTGTGCAAACAGGCATATAAAAAATCCGGTAGCAAATTAGGCAAAAGGATGCCAATAATTAAAAAGAAATGCTCAAAGATTGTGACTGGACCTATCAAAGCTGCTGCTGGAAAGCGGAAAAGTACAGAAACCGCCGCAGATGATGAGGAAATCGAACTGCCTTTACCTGGTGGTACCACATCTACTGCTGATATTGGAGACCGGCTACGGGTTTACTACGGGCCAACGCTTGATCTAAAGGTCACTTACGAAGCCAAGGTAACTGAAGTTCAAGAACGAGACGGTGAGAGAATGCTCAGAGTCCATTACACAGGCTGGAATATCCGATACGATGAATGGATCAAGGTTACGCGGATAGCAGTCAACTTGACACAATATGCAAAGTCTAAACATAAGGATGGTAGCGGTGGCAAGAAAGCTCGCGCTTCAGCATCTGCTTACAAAGTAATGACGAGGAACAAAAACGCCAGTTCTCCTCCAAGTAATCCATCAATATCAGGTCGCGATTTTGACTTGAACGAGATCAGGTCAGAGTTAAAAGGATTTGAGAAAGCGGTCAAATCCCCACCTTCGATAGCAGAAGACACCACTGTGATCAAACTAGAAAGGGAGGAGCCCGGGCAGCAGGAAGAAGAAGGGGAGATGCCCCCGGGAGGTCCTCCGATGGAGACTCCGATGGAGGCTCCGATGGAGGCTCCGATGGAGACGAAGCGAGAGAACGACGACATCTACGAGTTCAAAGAGCCGGAACCTTTCGAGTTTGAAGTGCGGAAATCGGACGAGATCAAGAAACGTCCGCAGCCCCACATTCTATTCGACGATCTGCCGCCCGATGAGAATACGTCGCCGCGATCGCGAGACGGAAGCTCCTCGCCGGAGAAGAACGATGATGAAGATTTGTCGGATGCGCCCAAATCGACCGAGGAGGCCAGGGACAGAGTCACGCTGGCAATGTTCAATGAATCGGCCGAAGAAGACAGCGGAGATCGCCTGGTCATTTCGGATGCGGAAGACTCGCAGGAGCCGCTCTTTACGTACCAACCCGAGCTATTCCCCGCCGAGAAAACGTATCTCCCAACATTTAAGGGATTTTCCGGCGAACAATCTACTTTCACGAAAACCAGCGAAGCGGATTGTAAATCTCCAAGCCTCAAAGAAGAGCAATCCTCGGACGAAGATCCGATAAATGCGGCTATCGAGAGAGTTAATTCGCAGTCGGTTTCAGATGAGAGTTCCGACGATGACGACATCGTAAAGCCGACTAATTCGGTCATACCGAAACTGTTATCGCCGGTTATCAACGAAACCGATGGAGATACACAATTTTCAAATCGGGTCGAAACGCCAGAGCCGAAACCGGCCGATGCTAATACAACCGAGCCAAAATCACCCATCTCACCTTATGAAGAGAGTAAATTGGAGCCGCATCTTAATGACGATCCTCCTGTCGCTGAAACGATTGAACCAAAATCAGATGACGATGCTACCAACAGTCCGAAGGAAGAAACGGCTGATCGATCAGATTCAGACGTGGATGTCATAATTCCAGAACCTCCAGCTGGTTTTCTATTGCATAAAGAATCAATAGCGGACAAAGTATTGAAAGCCTTGAACGATGCAAAGAATGCCGCGCTAGCGCCACCGCAAACCGAAGAAAAACCACCCATGCCTTCTCTCGCCGAGTCCGTTCTGATTTTAACCGTAATAGAACAAAGCGCAGACAAATCGGACCCACCTGAAGAAACAAAAGATCCTGTACCCGAAACACAGGCCCCTGACAATACAGCGTCTGATGAAGAAAAGTCAGATGTTATCGTAAAACCGACTTCGCCTGTGCCGGAAAAACCATCACCTGATTCCATCGTTGCTGGTCCTGCTGATTCACCAGCGGAAAGCAGCATCACTACTATTCCGAATCGTAAACCTAGCAGTGGAGGAGAACTCAGCAGTAAAAACAATGTCCTCAGCGAAACTATCCTTAAATTGAGCACTCAGATTAATATGTCTACCCCTGCACTTCCCGATACTGATGAAGACACAGATGACTCTTTCGATAAATTAATAATTGATCGTGCACCCAGTGAGGATTATGATTCACCTGTTGGATCATCGTCGGAAAATGATCCAGCACCAGAAAGTCAGGATACCGTCAAGCCGGATTGGCCGAGTTCTCAAAAACCTAAAATAATAGAAGAGTTGAAAATAGGTACTAGTGGATCTAGATTAGCTCGGGAGTATGGAGTTGGAAATGCAACAAGAGACCGCGTCCAAGAGAACGACGACAATGACGAAGAGCCTTACAACGACGACTGTGCTAAAAAGTTACCATCCAACGAAGAATCTTTACAATGCTTAGAGACCAATAAGAGTAGCGAACGAGTACCTTCGGATCATTCGAGTGCAGAAGATAAGGACGAGGATCAGATGTCACGGTCATCCAAAAAACCAAAGCTTGATCCCAACAAACCTTTATCAAGTTGGCGAAGGCAGAAAGCATCATCGGAGGAAGATCTCAGTCCCAGTACTACTGGCCCGAGCGGGACACCGACCGAAAGGAGCGAAAGTAGTACGAATGTTCCATCTGCGCCTCGGCGCGGCCGCAGACCGCGCAGAACTTCTGAAGTGGGGGAACCTCTGCCAGGACCATCTTCTACCCTGGCTGCTAATGCTTCTGCTGCACCTGTTAATCCACAATACAACTTCCTACTTGATTTGGGTGCCGATGACCTGCCGTGCTCCAAGAAAATCGCCATTATAACGAAACGCATGGCCGATCTCAGCCGAACCTTTAACAGCTTCAAGACGGAACTCATGACTATAGACCGCAGAAGAAAAAAGCTCAGAAGAAAAGAGCGTGAGGGATAA
Protein Sequence
MVSNNIPTPIALVMAGLKWRYLQLENTFFTIWRTFFSSEILSGFQLGAAESHWCMKSESVDNDDPAFLSVGTDVSAKYKGAFCEAKIKKVVKNIKCKVTLKSGGGGTLMVPDDAIKGTLRVGNTVEVRNEAKKETVEAILTKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFADGETLDQLPLTHPEHFSSPVIGHSAGRRGRRTQRTQSEESRSWEGEGWAPVREREPHAGRVVLVEVGAGGSQERRRPQHQWFPGLVVAPTAQDTVKIRIEDDYLVRSFKDGRYYTVPKKEAREFKKGSGPQDVAGIEAALQYLNGGVLPPHWDRDVLFGTDQIGKNDDGNSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRQPTIANKDVDLYRLFKVVHKMGGFNRVTNQNQWRSIAVRLGFQPVSTSVTNLCKQAYKKSGSKLGKRMPIIKKKCSKIVTGPIKAAAGKRKSTETAADDEEIELPLPGGTTSTADIGDRLRVYYGPTLDLKVTYEAKVTEVQERDGERMLRVHYTGWNIRYDEWIKVTRIAVNLTQYAKSKHKDGSGGKKARASASAYKVMTRNKNASSPPSNPSISGRDFDLNEIRSELKGFEKAVKSPPSIAEDTTVIKLEREEPGQQEEEGEMPPGGPPMETPMEAPMEAPMETKRENDDIYEFKEPEPFEFEVRKSDEIKKRPQPHILFDDLPPDENTSPRSRDGSSSPEKNDDEDLSDAPKSTEEARDRVTLAMFNESAEEDSGDRLVISDAEDSQEPLFTYQPELFPAEKTYLPTFKGFSGEQSTFTKTSEADCKSPSLKEEQSSDEDPINAAIERVNSQSVSDESSDDDDIVKPTNSVIPKLLSPVINETDGDTQFSNRVETPEPKPADANTTEPKSPISPYEESKLEPHLNDDPPVAETIEPKSDDDATNSPKEETADRSDSDVDVIIPEPPAGFLLHKESIADKVLKALNDAKNAALAPPQTEEKPPMPSLAESVLILTVIEQSADKSDPPEETKDPVPETQAPDNTASDEEKSDVIVKPTSPVPEKPSPDSIVAGPADSPAESSITTIPNRKPSSGGELSSKNNVLSETILKLSTQINMSTPALPDTDEDTDDSFDKLIIDRAPSEDYDSPVGSSSENDPAPESQDTVKPDWPSSQKPKIIEELKIGTSGSRLAREYGVGNATRDRVQENDDNDEEPYNDDCAKKLPSNEESLQCLETNKSSERVPSDHSSAEDKDEDQMSRSSKKPKLDPNKPLSSWRRQKASSEEDLSPSTTGPSGTPTERSESSTNVPSAPRRGRRPRRTSEVGEPLPGPSSTLAANASAAPVNPQYNFLLDLGADDLPCSKKIAIITKRMADLSRTFNSFKTELMTIDRRRKKLRRKEREG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-