Basic Information

Gene Symbol
specc1la
Assembly
GCA_027564375.1
Location
JAOPUG010000099.1:6866326-6911529[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.034 59 4.8 3.1 29 55 200 226 194 240 0.85
2 4 2.4e-08 4.2e-05 24.5 1.8 16 63 401 448 399 450 0.95
3 4 0.38 6.7e+02 1.4 0.1 29 48 442 461 440 466 0.86
4 4 0.15 2.6e+02 2.7 2.7 36 65 516 545 514 545 0.88

Sequence Information

Coding Sequence
ATGATGAAATTCAAATCGCTATTTCGCAGGGGCCCGGCGGGCTCCGGCAAGGGCGAATCACAGCTGAAGGGAGCGCCTTCCGTCTCGAGCCTCGACTCGAAGCATCACCAGTACGCACCGCGCGACAAGAACAAACTCTTCTTTGGCTCCAAGGACAAGATCGACCGCCCGCCTAAGAAAAAGGGGCGCGATGCAGCCAATAACAATGCACCGCCGGAGGAAATACGCACGCGGCTCGACGAGGACTTTGGAATCGAAGAGGTGGCGCTGAACGGGGAGTGCTACGGCTCGGCCGACGAGCTCTCCTACCGCCAGTACGGCGGATCGCCCGCACCGACGCCGGCCGACGACTTTGTCAGTCTTCCCGTCGCCATGAACGCCGAGCGACAGGGCAGCACTATCTTCAAGGAATCCGAACTCTACGCCACTTCAGACGACAGCGATGCCAACGATGTGGCCACTCCGGACTGGGATAAACACTCATCCAGCTCTCTCAGCGAGGTGTCGGTCGCCTGTCTGCAGGATAGAATATTGCAAATGGAGGAGAATCATTACAGCACGAGTGAAGAATTGGCTGCAACCCTAGCTGAACTTACAGATCTGCAGTCACAATTAGCGGCCGCTCAAGCGGATAATGAGCGATTGGCGGACGAGAAACAAGTCCTTCTCGAATCGCTTTGCAGGCAGACCGAAAGGCTGGAAGATTCTAGATCAAAGGTGGATACATTGCAAGAACTTCTGCTGCGGGAAAATGGAGACGGGGACGTGGGGGTGATCACCGAGCGCGAACAGAAGCTGCTGCTGCTGCTGAAGATCACGCAAGAGGAACGTGAGTCCTACCTGGCCCGTCACGAGGAGATGTCCTCGGAGCTGGCCGACGTGCGCACCGGATTCGAACAACAGGAGAAGCGGAGCGAAGATCTGCTCGAAAGGATCAAAATAGTAGAGGCGGAAGCGGAGGAAGCTAGAGGTTTGGCAGCCGCCAAGCATCAACATGCCGCGCACCTTTCTGAATCTCTCAAATTCGCCAACAATAAGGTTACCCAATTGGAAACGGAGCTCAGGAACAGAAATGTGCCTTCGGCGCCGGCAAGTCCAAGTCCGAGGCAAGACAATGAGCATGCCTTGATAGAGCGGCTGTCTATTGCTCAGCGGCAACTCGATAGGCTCAACGCCGATTATCGAAAAGCCATCGAGGAGGCCACTTCTTCACGAAACACCGCCAAATCGACTATTTCGGAGCTGGAGTATCAAGTAGAGCAATTAAACCAAGAAAAAACTAGTCTTCATGATGAAATTCAAGCATTGCAGAATTCAGTTACAGAGCTACAGATGCAGTGCCAAATACTGCAAGACGAGAAACGAGCATTAACCAATCGGATGGGCGAAGCGCTGAGCAGAAGTGGCGAAGCAGAACGAGCTGCAAGAGATGCCAGGGCATCCGTCACACAGATTACCAGGGAGAGAGAGAGAGACGAGGCAGAGTGGAAGCAGTTCCAGTCGGATTTATTGGTTACGGTGCGAGTTGCTAACGACTTCAAAACTGAGGCCCAAAAAGAGCTAGAACGACTTATTTCGGAGAATAAAACTGCACGCGATCGAATCAGACATTTGGAGCAGCAAATCGAAAAGTTAAATGGTGAGGAAGTCATAAACACTCCCATGGAAGATCCCGGCGTTATCAATAACAAGGTAAATTTTCCATTGACTGTAGAGTCAGTTAAAAAAGAACCACGAAACCAGTCGGATTTATTCGGGTCGATTGAAGAATTTTATCCGACGGATATATTCGAGAGTATCAAACGGAAATACCTGGATAGTATCAACTCGATTGCGGCACTTGAGAGAGAGAGGGATGAGGTGATCAATGAGGATGATGATTATTCGGAGCATCTGAATGGAGAGGTTGTTTTGAGGAATAAAGGGAGGTATTCGGAACCAGGCCCACTCACAAACGCACGCAGGAAAAACGAAACTATTTTCAGCCGCAGCTCCGATTTACCCAAATCGTTCAGTTTAGAATTAATCAACAGTGTCCCGCAGCAGGGACTACATGAAGCGAAAAGCGTTGAGAATCTGCACGGTTTAAGTTATTATAATATATCTGGTATGGACCCCAGTAGTGATTCGTTGTTCGAGGGATCCGATAACGTTTTTAATTCGCCCGTCGAGGAGAAAACTATTCGCGTCGTTGATTACAAATTGAAAGATATCAATACCAATAAAGTAGACGAAGCTATGGCGGTGGAAGAAGCGCCGGCGACGCCGCAAATCGCCGATGAAATCTCCCGAGTGTTACAGATCGCGAGATCATCGGTAAAACCGGCGCCGCTCCCGAAACCAGATCCCCGACCGATCGCAGCGGATCGCAAATCGACCGTGCCGCCCGTGCCACTTCCGCGCAAACTCAGCCACCACTCGATGGAAAATTTAGCTCGCGAATATGCCTCTCACCGAATACGCAAACACAGCAAATCCCTCGACGATTTAAACTTCTCGCACAACTTGAGCATATCGGAGGATTACGTCAAGCCAATTAAGGACGTCCCGTTCGTTATCAACACGACTGAGCATATGCAACCGGAAGTTAGATCGATACTAAAACCGCCTGAAAAACCGCCGCGGATCGTCCAAGTTTCCGACACGGATATGGACGACTGGGAAATAGTCGATCGGAACGAATCCAGTGATAAAACTGATACTCTGACGAGGAGGTCCGTTCTGTACTCGTCACGTAGCCCTAGCGCCAGGCTGAAGTCGGTGCAAGATCGCACGAAATCCGCACCCGTCATCTATAACAAGAAAAGAGACCAGTACCCTATGCGGACTGTTCCAGGCAGACGCGAAAAGAGCACGAATTTGAGCCGTCAAGATTCTCGACTATCGGTCAAATCACTGATCGAGAGCATAGAAAACGCAGCGAAAGTTGCAAAACAACATCAAGCGGCGTCTGGGGTCACCACCAGCAGTGGCAATTCCGTCGCTTCCAATCTCACTTCCAATGCCTCTAGTCTTGCTGGCAGCGCACCTCCCAGTCCGGTGGCAGAGTGGCCGCAGAGCATAATGAACCTCAGTCAGCCGTCGGCTGCGAATCGCAGGAGCCCCATACTCGATCAGGGGAAGAGTGCCACCTCCAACGGCATTTCCTCATCGCTACCCATACCAGGTCTTTCCAACCCCCTAAGCAATGGCTTCAATCCTGCGGGCAGTGGAAAACCACCAACCGCCAGCCAGCAGGGCGGTTTGAGTCCTCGTGGAATTATCATCAACGAGCAACTGAAACAAGAGTATGTGACTTCAAATACATCGCCCAGTCATAAAGTATGCGCCGGGAAGATAACCACTAATATGTCCGATGACCAGGCTTCCAACATGCAAGCCTTACTACAGCACAACAAGGCCATGGAGACTTTTGCCAGGAGAAACAGCTACGGCGACCTTTGTGAAAGAAAGGATCCTCTGAATGCGCTAGTAAAAAATGGAGGATCAAAACGAAACGCTTTACTTAAATGGTGTCAGCAAAAGACGCAAGGATATAAGCACATAGATATAACTAATTTCAGTTCTTCGTGGAACGATGGTCTGGCGCTGTGCGCATTACTGCATTCATACCTACCGGAGAGAATATCGTACGATTCTCTGGTTCCTGCTGATAAACGAAGAAACTTCACTGTCGCCTTCTCAGCAGCGGAGAGTGTTGGCATACATACAACTTTGAATATTCAAGACATGATCCAGCTGGAACGACCCGACTGGCAGCAGGTCATGGGCTACGTGACCAACATATACAAACACTTCGAAACGTGA
Protein Sequence
MMKFKSLFRRGPAGSGKGESQLKGAPSVSSLDSKHHQYAPRDKNKLFFGSKDKIDRPPKKKGRDAANNNAPPEEIRTRLDEDFGIEEVALNGECYGSADELSYRQYGGSPAPTPADDFVSLPVAMNAERQGSTIFKESELYATSDDSDANDVATPDWDKHSSSSLSEVSVACLQDRILQMEENHYSTSEELAATLAELTDLQSQLAAAQADNERLADEKQVLLESLCRQTERLEDSRSKVDTLQELLLRENGDGDVGVITEREQKLLLLLKITQEERESYLARHEEMSSELADVRTGFEQQEKRSEDLLERIKIVEAEAEEARGLAAAKHQHAAHLSESLKFANNKVTQLETELRNRNVPSAPASPSPRQDNEHALIERLSIAQRQLDRLNADYRKAIEEATSSRNTAKSTISELEYQVEQLNQEKTSLHDEIQALQNSVTELQMQCQILQDEKRALTNRMGEALSRSGEAERAARDARASVTQITRERERDEAEWKQFQSDLLVTVRVANDFKTEAQKELERLISENKTARDRIRHLEQQIEKLNGEEVINTPMEDPGVINNKVNFPLTVESVKKEPRNQSDLFGSIEEFYPTDIFESIKRKYLDSINSIAALERERDEVINEDDDYSEHLNGEVVLRNKGRYSEPGPLTNARRKNETIFSRSSDLPKSFSLELINSVPQQGLHEAKSVENLHGLSYYNISGMDPSSDSLFEGSDNVFNSPVEEKTIRVVDYKLKDINTNKVDEAMAVEEAPATPQIADEISRVLQIARSSVKPAPLPKPDPRPIAADRKSTVPPVPLPRKLSHHSMENLAREYASHRIRKHSKSLDDLNFSHNLSISEDYVKPIKDVPFVINTTEHMQPEVRSILKPPEKPPRIVQVSDTDMDDWEIVDRNESSDKTDTLTRRSVLYSSRSPSARLKSVQDRTKSAPVIYNKKRDQYPMRTVPGRREKSTNLSRQDSRLSVKSLIESIENAAKVAKQHQAASGVTTSSGNSVASNLTSNASSLAGSAPPSPVAEWPQSIMNLSQPSAANRRSPILDQGKSATSNGISSSLPIPGLSNPLSNGFNPAGSGKPPTASQQGGLSPRGIIINEQLKQEYVTSNTSPSHKVCAGKITTNMSDDQASNMQALLQHNKAMETFARRNSYGDLCERKDPLNALVKNGGSKRNALLKWCQQKTQGYKHIDITNFSSSWNDGLALCALLHSYLPERISYDSLVPADKRRNFTVAFSAAESVGIHTTLNIQDMIQLERPDWQQVMGYVTNIYKHFET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-