Maru014728.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- -
- Assembly
- GCA_944547385.1
- Location
- CALYMV010002397.1:406844-453054[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.21 13 7.7 0.1 1 21 369 389 369 390 0.95 2 12 0.43 26 6.7 4.8 2 23 594 616 593 617 0.95 3 12 1.4 84 5.1 2.0 1 21 626 646 626 649 0.88 4 12 0.51 31 6.4 0.1 3 23 654 675 653 675 0.95 5 12 1.2 75 5.2 0.0 2 23 709 730 708 730 0.94 6 12 0.18 11 7.8 0.1 2 23 775 796 774 796 0.92 7 12 0.00023 0.014 17.0 1.4 1 23 812 834 812 834 0.97 8 12 0.0091 0.55 11.9 2.6 1 23 843 866 843 866 0.97 9 12 2.2 1.3e+02 4.4 0.9 3 23 873 894 872 894 0.95 10 12 0.068 4.1 9.2 0.7 3 23 961 982 960 982 0.96 11 12 0.035 2.1 10.1 6.0 1 23 988 1010 988 1010 0.95 12 12 4.2e-05 0.0026 19.3 2.5 1 23 1016 1038 1016 1038 0.99
Sequence Information
- Coding Sequence
- aTGCCGCCGATTTGCTGCGTGAAAGACTGCAGCACTTCGCGCGGCGTATTTTACCGTTTTCCCGCGCAAGAACAAAATGTGAAGTTGTTGAGAAAATGGTACAACGCTATCGGACATATGAAACTGATGAGAAGAGATATTGCAAACAGTAAGATTGTTTGTGTCAGGCATTTTGAGAAGCGGTATCAGCTGCCCGGGGGGCGGCTGGTCCATGGCGCCGTGCCTACTTTGCATATACCGTCTTCGAAGTTGCCGTTAGTTAATGATAATTGTAAAACGAGTGCAACGAATACTCAGGGAATAACAGCAGTTGTTCCTCCGAAAATCACGCAGTCTGACGTTGTCGATTTGACAGATGAAATTGAAGAATTAGTCGTTGAAGAAATTGTGCATACCACGGAAGAAGTATTTGTAGATGTAAACGGCCCCGAAGAAATAATTCACaatgAACCTTTGCGCGAGGATGAGCCTTCGTGCGTTGATGAACCTTTGTGCGAGGATGAACCTTCGTGCGTGGATGAACCTTTGTGCGAGGATGAACCTTCGTGCGTGGATGAACCTTCATGCGAGGTTCCCGTCGGCCCCGAATGCCGTATTTGCGCTAAAAGAAACACAGCCATGGTACCGATATTCGAAGAGGACGGTCTCAAGAATGACCTGGCCGGTCTCATCAATACATATCTACCAATCACGGTGTCGAAGACCGATCAAAAATCCCAACATACCTGCCTCAATTGCGTTCAAATCCTTGAGAAATGGGACCGACTCACTGAAACATGCGCCAAAACAGACGAGCATTTTCGAAACAGGGAACCGGAAGAGAAAATGAACCTCTTAAAACGTACGGACTTATTTTTGGATGTAAATCCGGTAAACTTTAACACAAAATCCTTGTGTTTGAGGGATATCAGCACGGCGCCGCCGAAAACGTTCTTTGAAAAGCAGCTGCCTTCGATTGTCTGCCGAAAATGCAACTTTGAATTCTACGGAAAGGAATGTATGGAGGCCCACTTTTGTATTTGCAAGGAGCTGCAGTGCTACCGGTGCCTACATTTATTCCAGTCGCTTCGCTCGATCTACTTGCACTTTGTCTCTTGCAACAGCTACGTTTGCCGAGGCTGCGCGTTGGTATTGTCATCGCGCACTGATCTGCGACAGCACGAAAGGTACTGCCGAACGCCCGCCGCCAAAGTGCCACTGCAGTGCAAGCGTTGCGACGAGTATCGCACGCGGTGTCCGGAGGACTACGAGAATCACGTGCTCGGTTGTGACGCCGTCAATCACCTGGATATCATTGTGCCGgcTGCACCGCGTAAAAACAATTGCCTCGCATGTCAGCTGTGCCTGCGGCTTTTCGGAAGCGTGTCGGAGCTCGTGAAACACGTCGGGACTTGTTCGCTGTACGTCTGCGAGTGCACGGCTATGTTCCGCAGCTTAGCGGACCTCGTGGAGCACGGTTCGGAATGCGACTACGTCGTCGTGTCGTCTTCGTTCGAAGCCGAACAGTATACATGCGAGGTAAAGCGCCCGATCCCTGCGCTCGCGGACCGCGAGGTCTCGTTCAGAAGCCTATGGAAACGGGCGCCGGCAGTCGAAGAGCCAACGGCGGTGATCAGCGATGAGGAGGGCTGCGCGGGAGCCGAGGACGGCGGCCGGGAGTCCCCATACGAGGCCTCTTCGCAGCCGGAGGCCAAATCCGCCCTCGACCACCACGAGGCGGAAATGGAAGACGTCTTCGCCATGCTGCAGAGAGAGTCTTTCACCGAGAACTCCCACTTAAAGTGTTACCTGTGTAAATTAGTATGCGAATCGAAGATCCACCTTCGAGACCATCTCATGATCAATCACCACGCGGCCAAATTGCTTGCCAGCCGTTATGTCTGTGAAATATGCAAGACGCAATGCCGTTCGATCGACGCTTTCAATTTACATTCGTACAATAGACACACGTCTCGCATCTGCATGTACTGCGAAGAACAATTTCCAACAGTACTGAAGCTAACCGTACATCTCAAGGAACAACACTTCAAAGGAGATAAGAAGGGCTGTCAGATCTGCAGGAAGATCTTCCTGAAGACGGAGTTGCCAAAGCACCGAGAGTGGCACTACCTCGAGGAGAAGCTGTCCTGCGAGGTTTGCCAGAAAGTCGTGATAGGGGCGAAGAGATACGCCGTACACATGTCCGAACATCGCTGCAACGAACCCATCCTATGCTTCGAATGCGGAGCCATGGTGCCTAAGTACCAGCATCCGAAACATCTACTAACCCACAAGAATAAACCAGaaaaAGGAGCACTTGTTGTGGATCGCAGGGAGAGAGTTGAATGCGAAGTATGCGGTCGAATGATAGTGACATCGAAACTACTGTGGCATATGAGACGAATGCATTCGGTGGATAGTTCGGAAAATCACCAGAGAACCGGTAAAAGCAAatTTGTCTGCCTGGAATGTAACCGATCCTTCCCCCAGAAGAATCTGCTAGATAAGCATATGCACGGCCACGAAATCGGTATAACCCGCGGCGGATTCAAGTGTCATTTCTGCGCCATGGGCTACAACACGAAGAAGAACCTCGACAGCCACATTAGAGCGTACCATCAGTTCGAAGAACCGCACTGCGCCATCTGCGACATCCGCTTCGAGACCATCCAAGAGAAATACCTGCACAGGCGAATGGAGCATTCGTACGCGAAGTTCGAGTATCTGTGCTGCGGGTTATATTTTGCGAAGATAAGCCAGTTTCAGTCGCACTTCTTCGAGAGACACGACGACGGCGAGACGCAATCGGTCGGACGGTACAAAGATAAGACGCCGACGCCGTATCGATATCAGCTGACCTACGCCAAAAACGACAAAGGCGAACCGCACATAAAAGTCGCATGCGGACACTGCGGCAAAGAAACGACCAACATGCTCAACAACAATATACACATTCGGAATATCCACATCGGCATCCGACCGTACCATTGCTCTTTCTGTCGGCAGGCGTTCAAAACGCAAACCTCTTTAACGCACCACGAATACATCCACCTCGACCTAAAACCGTACAAATGCTCGAAATGCCCACAGACCTTCCGGCAGCCGAATGACATGAAAAAGCATGAGAAACGCCACGATAGAGACTACGCTTTCTCCGACGTGCCAGTCGTGCCCAAGAAACGCAAACGCTTCGAACATTACACCTCATAA
- Protein Sequence
- MPPICCVKDCSTSRGVFYRFPAQEQNVKLLRKWYNAIGHMKLMRRDIANSKIVCVRHFEKRYQLPGGRLVHGAVPTLHIPSSKLPLVNDNCKTSATNTQGITAVVPPKITQSDVVDLTDEIEELVVEEIVHTTEEVFVDVNGPEEIIHNEPLREDEPSCVDEPLCEDEPSCVDEPLCEDEPSCVDEPSCEVPVGPECRICAKRNTAMVPIFEEDGLKNDLAGLINTYLPITVSKTDQKSQHTCLNCVQILEKWDRLTETCAKTDEHFRNREPEEKMNLLKRTDLFLDVNPVNFNTKSLCLRDISTAPPKTFFEKQLPSIVCRKCNFEFYGKECMEAHFCICKELQCYRCLHLFQSLRSIYLHFVSCNSYVCRGCALVLSSRTDLRQHERYCRTPAAKVPLQCKRCDEYRTRCPEDYENHVLGCDAVNHLDIIVPAAPRKNNCLACQLCLRLFGSVSELVKHVGTCSLYVCECTAMFRSLADLVEHGSECDYVVVSSSFEAEQYTCEVKRPIPALADREVSFRSLWKRAPAVEEPTAVISDEEGCAGAEDGGRESPYEASSQPEAKSALDHHEAEMEDVFAMLQRESFTENSHLKCYLCKLVCESKIHLRDHLMINHHAAKLLASRYVCEICKTQCRSIDAFNLHSYNRHTSRICMYCEEQFPTVLKLTVHLKEQHFKGDKKGCQICRKIFLKTELPKHREWHYLEEKLSCEVCQKVVIGAKRYAVHMSEHRCNEPILCFECGAMVPKYQHPKHLLTHKNKPEKGALVVDRRERVECEVCGRMIVTSKLLWHMRRMHSVDSSENHQRTGKSKFVCLECNRSFPQKNLLDKHMHGHEIGITRGGFKCHFCAMGYNTKKNLDSHIRAYHQFEEPHCAICDIRFETIQEKYLHRRMEHSYAKFEYLCCGLYFAKISQFQSHFFERHDDGETQSVGRYKDKTPTPYRYQLTYAKNDKGEPHIKVACGHCGKETTNMLNNNIHIRNIHIGIRPYHCSFCRQAFKTQTSLTHHEYIHLDLKPYKCSKCPQTFRQPNDMKKHEKRHDRDYAFSDVPVVPKKRKRFEHYTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01007442;
- 90% Identity
- iTF_01007442;
- 80% Identity
- iTF_01007442;