Maru016360.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- ZNF711
- Assembly
- GCA_944547385.1
- Location
- CALYMV010002733.1:190227-213456[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0026 0.16 13.6 2.0 1 23 83 105 83 105 0.99 2 11 0.025 1.5 10.5 1.1 1 23 112 134 112 134 0.98 3 11 0.41 25 6.7 0.5 1 20 138 157 138 161 0.85 4 11 0.0037 0.22 13.2 0.5 3 23 170 191 169 191 0.96 5 11 7.3e-06 0.00044 21.7 2.3 2 23 200 221 200 221 0.97 6 11 2.4e-05 0.0014 20.1 2.1 1 23 232 254 232 254 0.97 7 11 0.15 8.9 8.1 0.1 2 21 261 280 260 281 0.91 8 11 2.5 1.5e+02 4.3 0.1 2 23 293 315 292 315 0.89 9 11 4.2e-05 0.0025 19.3 3.7 1 23 321 344 321 344 0.96 10 11 3.2e-06 0.0002 22.8 2.3 1 23 353 375 353 375 0.97 11 11 0.004 0.25 13.0 0.6 1 23 381 404 381 404 0.96
Sequence Information
- Coding Sequence
- ATGCGTGAATCGGACGATGATATGTCATACTTTGACGAAGCGGATAATATGCCTTTGACCAGCCTTAAggaaaattttcaagtttcctCTAAAAAGCCCAGGCGGACTGCAAGGAAACAGGAGGAGGCTATATATGACCATACCGTTGATAACATGGATAAAGTCCACATGATAACGTTGAGTATAGAGGAGCAGAAGGCCGCTTTGAAGGAACAAGGCAACACCAAAGTGTATATGGAAGCTGTGTACAAGTGTGAAAAATGCATGAAGGGCTTCAGATTTGAAGAAACCTTTACGGCGCATCTACAGCGACATTCTGAGAGCTACGGACTTTTCAAATGTGAAATATGTCTTCAGTATGTAAAAACGGCAACTTCGTATAAAAGTCACCTGATGAATCACTCCAAGCGGTATAAATGCTCCTTGTGCGACTACACGAGGTTCTCGAGATCGACTGTGGTGGAACACTATGGGGCTGAGCACCTGAAAGAACGCATGAAAATGCTGTGCAAAGTGTGCGGAAAGGAATTTTTgaaaccATCGGTTCTTAGAAAACATATTCAGTACAGGCATGGAAATAGTGACAGATCAAAGCCAACTTGCGAACACTGTGGCAAGACTTTCACAGCTCAGGAAACGCTACGTCTACATATGCTTAAGCATCTTGGCCCAAAACCCGAGGGTAAGAAGAGATACAAATGCCACGTGTGCGATATGAGATTTCGCACTCCGACATTGCTCAGGACTCATGGAATCAAACACTCAAATTCGAGAGATTGGTACTGTGTTGAGTGTGACCTCTCGTTCAAGTCTGAGTTCATACTCAAGCAACACTTGAAGGCCTCCAAGAAACATGTCGATCCGTCTTCCTTGCTTGAATGCCCGCAATGCCCGATGAAAGTGCTAAATCAGAAACTGTTAGATCAGCATGTAGAAAAGATGCATCTATGCGTGGCGAATCATCAGTGTAGTATATGCCCGAGGGCGTTTTACACCAATACTCTGCTCCGGAAACACCATAGACTAGTGCACGAAGGCATACGACCGCCAAAGAAACACATGTGCGATATATGCAGTAAAGGATTTAGGACCAAAATAACTCTGAACAACCACATAAGGACGCACACCGGCGAGAAACCGTTCGAGTGCAAGCAGTGCGAGTCCCGCTTCGGACATCCGGGCGCTCTCTACACCCACATCAAGCTCATACACAGGAATATCAAGAGGCCTAGCGCCAAACAAAGAGCTGAAATGTCTGCTGCGGCTCAAATTACCAACCTTGccaatatttaa
- Protein Sequence
- MRESDDDMSYFDEADNMPLTSLKENFQVSSKKPRRTARKQEEAIYDHTVDNMDKVHMITLSIEEQKAALKEQGNTKVYMEAVYKCEKCMKGFRFEETFTAHLQRHSESYGLFKCEICLQYVKTATSYKSHLMNHSKRYKCSLCDYTRFSRSTVVEHYGAEHLKERMKMLCKVCGKEFLKPSVLRKHIQYRHGNSDRSKPTCEHCGKTFTAQETLRLHMLKHLGPKPEGKKRYKCHVCDMRFRTPTLLRTHGIKHSNSRDWYCVECDLSFKSEFILKQHLKASKKHVDPSSLLECPQCPMKVLNQKLLDQHVEKMHLCVANHQCSICPRAFYTNTLLRKHHRLVHEGIRPPKKHMCDICSKGFRTKITLNNHIRTHTGEKPFECKQCESRFGHPGALYTHIKLIHRNIKRPSAKQRAEMSAAAQITNLANI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -