Basic Information

Insect: Micropterix aruncella
Gene Symbol: -
Assembly: GCA_944547385.1
Location: CALYMV010003189.1:6566-9849[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0031 0.19 13.4 0.4 2 23 87 109 87 109 0.95

2 16 0.0024 0.14 13.8 5.4 1 23 115 138 115 138 0.96

3 16 0.023 1.4 10.7 3.7 1 23 144 167 144 167 0.96

4 16 0.0016 0.095 14.3 3.8 1 23 174 197 174 197 0.93

5 16 0.0001 0.0063 18.0 1.2 1 23 202 225 202 225 0.94

6 16 0.1 6.1 8.7 0.6 1 16 260 275 260 277 0.84

7 16 0.0025 0.15 13.7 0.9 2 23 375 397 374 397 0.93

8 16 0.0029 0.17 13.5 3.1 1 23 403 426 403 426 0.97

9 16 0.0064 0.39 12.4 3.1 1 21 432 452 432 455 0.91

10 16 0.17 10 8.0 5.6 1 23 462 485 462 485 0.93

11 16 6.2e-06 0.00038 21.9 0.4 1 23 490 512 490 512 0.97

12 16 0.37 23 6.9 0.2 3 23 520 541 520 541 0.91

13 16 0.11 6.8 8.5 0.7 1 23 547 570 547 570 0.92

14 16 0.0021 0.13 14.0 5.6 1 23 576 599 576 599 0.97

15 16 0.066 4 9.2 0.0 2 23 611 633 610 633 0.95

16 16 0.0093 0.57 11.9 0.1 3 23 641 662 640 662 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0031	0.19	13.4	0.4	2	23	87	109	87	109	0.95
2	16	0.0024	0.14	13.8	5.4	1	23	115	138	115	138	0.96
3	16	0.023	1.4	10.7	3.7	1	23	144	167	144	167	0.96
4	16	0.0016	0.095	14.3	3.8	1	23	174	197	174	197	0.93
5	16	0.0001	0.0063	18.0	1.2	1	23	202	225	202	225	0.94
6	16	0.1	6.1	8.7	0.6	1	16	260	275	260	277	0.84
7	16	0.0025	0.15	13.7	0.9	2	23	375	397	374	397	0.93
8	16	0.0029	0.17	13.5	3.1	1	23	403	426	403	426	0.97
9	16	0.0064	0.39	12.4	3.1	1	21	432	452	432	455	0.91
10	16	0.17	10	8.0	5.6	1	23	462	485	462	485	0.93
11	16	6.2e-06	0.00038	21.9	0.4	1	23	490	512	490	512	0.97
12	16	0.37	23	6.9	0.2	3	23	520	541	520	541	0.91
13	16	0.11	6.8	8.5	0.7	1	23	547	570	547	570	0.92
14	16	0.0021	0.13	14.0	5.6	1	23	576	599	576	599	0.97
15	16	0.066	4	9.2	0.0	2	23	611	633	610	633	0.95
16	16	0.0093	0.57	11.9	0.1	3	23	641	662	640	662	0.96

Sequence Information

Coding Sequence: ATGAAGAAGACTGACATCAACAAAAAAGAAATTGCTTTGAATTTCTACGATGAATTTACAGACATCGGAGATGTTGCCTATGTAAAGACAGAAGTCAAAGATAatgataaagaagaagaagtattaATACCGGAAATACTGTTACCAGAAATATTGAAGCTAAAAGTATCACAGTGTCCGATAGTGCTGATCGAACGTTTGGACGATGCGATATTTCGTCGATACTCGAAACCTAAAAATGCAAAGGACCGGAAGGCGGAGTGCGATGTTTGTCATAAAATATTGAGTtccaaagatgtattacagaaTCATATAAAAGCCGTTCACTTAAAGCTGAAAGCATTTAAATGCAAGCATTGCGGTCATAAATTTGGAAACGTGTATCAGATGCGATCGCACATCCGTTTCGTGCACAACAAAGAACGGCCGTTTGCATGCGATCACTGCGACAGGCGCTATGCCTGTCGTGAAAATTTAAGCGTTCATATTCGGTACAAGCACGAGGATTGCGACGAAAAGTACGAATGCGACATTTGCTTGAAAACGTTCAAGCACAAACTAAAGTTACGTCGGCACGAATATTCTCAGCACAGAAACGTTACGTTCACCTGCGACTTTTGCGACAAAATGTTCACGAATAAGAACTCTTGGAAGAATCACGTCGAAAACGTTCACAGCGACTTTAAAAAATACGGTTGCATTCTTTGTCCGTACCAAGCGAACTATATAGAAAAATTGCAAAAACACATCTCGGCGATTCATCTCAAATTGAAACCGTACGATTGCAAAGTGTGCGGGAAGAAATTTGCGCTAAAATATTACATGACTAGTTATGTCTCGATCAACGCAAAGAAGACTGATTACAACAAAAACgaaatcattttaaatatcTACGATAACTTAATGGAGATCGACGATGCTGTCGTTGTGAAAGAAGAAATCAAAGAAGCAGAAGAGGAAGAAGTCGCTATACCAGAAGTATCGATACCAGAGGTATCGATACCGGAACCGTTTAAGTATCCGAGAGTGATGATTAAACGTCTGGACAAATCGATATTACTGCGACACTTGCAGCTGAAGAAAAATAATCCGAGGTATCGAGTAAGGAACCTGGTTAAAGTGAAGTGCAATATCTGTAAGAAGATGTTAAGCTCGAAATGTGCCCTCAAGCTTCATATAGAAGCAGTTCACTTGCAGTTGAAAGCTTTCAAGTGCGAGCATTGCGATGGCGAGTTTACGACCGTGTATCATATGCGATCGCACGTTCGACTTGTGCACGAGAAAGAGCGGCCGTTTGCGTGCGAGCACTGCGATCGTCGCTTCTCGAATCGGAGCAATCGGGACGCTCACGCTCGGTGCGTGCACGAGGATCGCGACGAAGAGTACGAATGCGACGTTTGTTTCGAGACGTTCAAGCACGAAATGAGACTGCGCCACCACCGTTACAACAAACACAGCGACGCCACGTTTGCCTGCGACGTTTGCGATAAAACGTACAAGACTAAGAGCGGTTTGAAGAGTCACGCCAACGTTCACAGCGACGTCAAAAAACACGGTTGCGACGCTTGTCCGTTTAAAACGAAGAACGCTGAGTCTTTGCGCAAGCACGTCTCGGCGATTCATCTCAAATTGAAACCGTTCGATTGCAAAGCGTGCGGGAAGAAATTTGCGATCAGACAGACCATGAAAAGCCATTTCATCAGCGTGCACACGAGGGAGCGGAAACATCAGTGCGAGACGTGCGTTCGCGCGTTCAAACACGCGCACGAACTGAAAGCGCACAGGAACAGGACCCACTTCCACATGGTGCACAATTTCGATAAGAAATGGGTGTGCGATGTATGCAACAGCGGGTTCACCACGAAAGTACCGATGCGAGAACACATTCTGATCACGCACTTGAACATCAAGAACAACGCCTGTTCATTTTGCGATATCGCCGTCATTAGCAAGATGTCGTTGAAGCGACACATCTTGCGGTGGCATATCAACCGCTGTTCCTACTCCTGTATCGAATGCAACGTAGACTTCAAGACTGAGCATGAATGGTCACTACACAGGAAACATGTACATTAA
Protein Sequence: MKKTDINKKEIALNFYDEFTDIGDVAYVKTEVKDNDKEEEVLIPEILLPEILKLKVSQCPIVLIERLDDAIFRRYSKPKNAKDRKAECDVCHKILSSKDVLQNHIKAVHLKLKAFKCKHCGHKFGNVYQMRSHIRFVHNKERPFACDHCDRRYACRENLSVHIRYKHEDCDEKYECDICLKTFKHKLKLRRHEYSQHRNVTFTCDFCDKMFTNKNSWKNHVENVHSDFKKYGCILCPYQANYIEKLQKHISAIHLKLKPYDCKVCGKKFALKYYMTSYVSINAKKTDYNKNEIILNIYDNLMEIDDAVVVKEEIKEAEEEEVAIPEVSIPEVSIPEPFKYPRVMIKRLDKSILLRHLQLKKNNPRYRVRNLVKVKCNICKKMLSSKCALKLHIEAVHLQLKAFKCEHCDGEFTTVYHMRSHVRLVHEKERPFACEHCDRRFSNRSNRDAHARCVHEDRDEEYECDVCFETFKHEMRLRHHRYNKHSDATFACDVCDKTYKTKSGLKSHANVHSDVKKHGCDACPFKTKNAESLRKHVSAIHLKLKPFDCKACGKKFAIRQTMKSHFISVHTRERKHQCETCVRAFKHAHELKAHRNRTHFHMVHNFDKKWVCDVCNSGFTTKVPMREHILITHLNIKNNACSFCDIAVISKMSLKRHILRWHINRCSYSCIECNVDFKTEHEWSLHRKHVH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -