Basic Information

Insect: Micropterix aruncella
Gene Symbol: -
Assembly: GCA_944547385.1
Location: CALYMV010006900.1:133724-136845[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00025 0.015 16.8 7.8 2 23 116 137 116 137 0.98

2 11 2.4e-05 0.0015 20.0 0.2 1 20 143 162 143 163 0.97

3 11 0.00014 0.0085 17.6 1.0 1 23 176 198 176 198 0.97

4 11 0.0006 0.036 15.7 0.4 3 23 206 226 204 226 0.98

5 11 0.0038 0.23 13.1 2.2 1 23 232 254 232 254 0.98

6 11 0.047 2.9 9.7 0.0 1 20 260 279 260 280 0.95

7 11 0.0022 0.13 13.9 1.8 1 23 289 309 289 309 0.98

8 11 0.00013 0.0079 17.7 1.2 1 23 315 337 315 337 0.97

9 11 5.1e-05 0.0031 19.0 2.5 1 23 343 365 343 365 0.99

10 11 0.0028 0.17 13.5 0.3 2 23 372 394 371 394 0.94

11 11 0.32 19 7.1 0.0 1 19 400 418 400 420 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00025	0.015	16.8	7.8	2	23	116	137	116	137	0.98
2	11	2.4e-05	0.0015	20.0	0.2	1	20	143	162	143	163	0.97
3	11	0.00014	0.0085	17.6	1.0	1	23	176	198	176	198	0.97
4	11	0.0006	0.036	15.7	0.4	3	23	206	226	204	226	0.98
5	11	0.0038	0.23	13.1	2.2	1	23	232	254	232	254	0.98
6	11	0.047	2.9	9.7	0.0	1	20	260	279	260	280	0.95
7	11	0.0022	0.13	13.9	1.8	1	23	289	309	289	309	0.98
8	11	0.00013	0.0079	17.7	1.2	1	23	315	337	315	337	0.97
9	11	5.1e-05	0.0031	19.0	2.5	1	23	343	365	343	365	0.99
10	11	0.0028	0.17	13.5	0.3	2	23	372	394	371	394	0.94
11	11	0.32	19	7.1	0.0	1	19	400	418	400	420	0.96

Sequence Information

Coding Sequence: ATGGCTAACGTAAAGGAGAAGGTGAAAACGCCCAAGACCCAAAAGCTGAAGTCGAAAAAGCCTGCATTAAAACCGGATAAGATTTGTACACGCGGAAAGCTGCGTTCCACGACGGCGAGATCGAGAAGCAACGGTTACCGTAACGGTTCTTTCGACGAGGAGCTCGAGAGTCGTACGGAGCGTACCGTTCGTACTCGTAAAATCTCGCGTTTCctgaaagatctcgatttcatTACGCCGGTACTAGCAGCGGAGAAATCCCAGAAAAAGAAAGCGGAAGATGTCGTTTCGCCGAAAGAAAAGGGGATAAATAAAACCGATtccaaaaaacgaaaaaagaaCGAAACGTGCCACATCTGCCATCGCAGGTTTTTCTTCAAGAGTCAACTGAAAAGGCATCTGCTGACGCATTTGAACATTCGTCCGTTCACATGCCCGCATTGCGCGAAAGGTTTCAGCCAAGCGGGGAATCTTAAAACGCATATCGTCTGTAGACACCGCAATTTTATGGATACGGAGAAGGTGTTCATATGCGATTATTGCCAGAAACCGTTCTCGCTCAAGGAGCGGTTGAAGCTGCATTTACGTCTGCACACGGGAGAGAAACCGTACGGCTGCAACCGTTGCGATATGACGTTCGCGAGGAAAGGAGAAGTCGCCCAACATTATCGCAGACACACGGGAGAACGCAAATATAAATGCAAAGAATGCGGTGCGAATTTTTCGTGCAACGCGAAACTAACGCTTCACGTCAAAAGTCATCTGGGCATTCGAGAATACGTGTGCTATCTGTGCGGAAAAGGCTTTCTGCGCCCGGACGCGATCAAAAAGCACTTGGCCTGCTTTCACTTCGACGAGAAACCGTTCGAGTGCCCCATTTGCGAGAAGAAATTGAAAGGCCATCTGCAGGAGCACATGCGAACGCACCGCGACGCCAAGCCGCACGTCTGCAAAGTGTGCTCGGCGAGCTTCGCGCAGCGCACGCACCTCATCGTGCACGCCAGAGTGCACTCGGGCGAGCGGCCCTACCGCTGCCGCGTGTGCCGGCGGGCCTTCGCACACTCCTCCGCGCTCACGCTGCACACGCGCCGCCACACGGGCGAGAAGCCCATTTCGTGCGCCATCTGCTCGGCGAGCTTCGCGCAACTCCCGCACATGAAAAAGCACATGCTCAACATACACAACCAGCGGCGGCCGTACATGTGCGGCCGCTGCCGCACGTTCTTCCGCGCGAAGGCCGAGCTGGCGGCGCACGCGGGCGCCTGCGCGGACGAGGCGGCGCCCCGGAGCCTCGAGGAGGAGCTGTCGGAGCGCGTGTCGGCCGCCCACGCGGGCGTGGAGCCGCCGATGCCGCTGTCCCGAATGCGGCTGCTCCTCGCTATCTTACTCAAGAAAATCTCCAGCGACAAGCGACTGGAAGCGCTAGGATTTAACAAACGATTGGTCGACGATATCTTGATCGAATCGCTCGAATCTTCAGGCCACAAGCCTTGCAAAGATAAAAGCTACCACCCCGCTCAAAGGCTAAAGATGAACGTTCAGATGCTGCTCGATTGGACCGTTCCGGACGATTTTAAAGCACGGTTCAAGACTGAAAATCGCTCGACGGAGGAACTGCTCGAGGAATTAACCAGTTAG
Protein Sequence: MANVKEKVKTPKTQKLKSKKPALKPDKICTRGKLRSTTARSRSNGYRNGSFDEELESRTERTVRTRKISRFLKDLDFITPVLAAEKSQKKKAEDVVSPKEKGINKTDSKKRKKNETCHICHRRFFFKSQLKRHLLTHLNIRPFTCPHCAKGFSQAGNLKTHIVCRHRNFMDTEKVFICDYCQKPFSLKERLKLHLRLHTGEKPYGCNRCDMTFARKGEVAQHYRRHTGERKYKCKECGANFSCNAKLTLHVKSHLGIREYVCYLCGKGFLRPDAIKKHLACFHFDEKPFECPICEKKLKGHLQEHMRTHRDAKPHVCKVCSASFAQRTHLIVHARVHSGERPYRCRVCRRAFAHSSALTLHTRRHTGEKPISCAICSASFAQLPHMKKHMLNIHNQRRPYMCGRCRTFFRAKAELAAHAGACADEAAPRSLEEELSERVSAAHAGVEPPMPLSRMRLLLAILLKKISSDKRLEALGFNKRLVDDILIESLESSGHKPCKDKSYHPAQRLKMNVQMLLDWTVPDDFKARFKTENRSTEELLEELTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01008792;
90% Identity: iTF_01008792;
80% Identity: -