Maru009883.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- -
- Assembly
- GCA_944547385.1
- Location
- CALYMV010001497.1:84341-94645[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 3.4e-06 0.00021 22.7 0.4 1 23 146 169 146 169 0.98 2 15 1.4e-05 0.00088 20.7 5.7 1 23 175 198 175 198 0.94 3 15 0.00096 0.058 15.0 0.7 3 23 206 227 205 227 0.96 4 15 0.033 2 10.2 0.9 1 23 233 256 233 256 0.96 5 15 0.0013 0.082 14.5 1.8 2 23 263 285 263 286 0.96 6 15 0.00044 0.027 16.1 0.2 3 23 292 313 290 313 0.95 7 15 0.0067 0.41 12.3 0.6 2 23 320 342 319 342 0.91 8 15 0.0067 0.41 12.4 5.0 3 23 350 371 348 371 0.94 9 15 0.033 2 10.2 0.1 1 20 382 401 382 405 0.89 10 15 0.0026 0.16 13.6 0.1 1 23 411 434 411 434 0.93 11 15 0.0023 0.14 13.8 2.4 2 23 468 490 468 490 0.95 12 15 0.043 2.6 9.8 3.0 1 23 496 519 496 519 0.92 13 15 0.12 7.1 8.5 0.0 3 23 532 553 530 553 0.95 14 15 0.18 11 7.8 1.2 1 23 559 582 559 582 0.94 15 15 3.9 2.4e+02 3.6 0.2 1 19 588 606 588 609 0.83
Sequence Information
- Coding Sequence
- ATGTCGCACATGTCGGAGTTTATGGGATTCGGGGAAGAGCCCCCGATGATGTACAACGCGGAGGTGCAGTACAAGAACACGGACGGCGGCTTCGTCATCCAGGACGGCATCAACGTCCAGAGCCACTTCTACGACATCTTCGAGGAGTTCATCCGCGAGGACCCCTGCAGCAACGGCTACCACCACAACCACAGCATCTTCGACAGCATCAAGAAGGAGTTTGCGCCGCCTCCGCCCGTGCCCGAGGCCAGTCCCAGCACTCCTATCAAACATGAGGTCGTGCCCGTCGCACCTGTACCCGTTAATCATATTCACAAATCTCTGGAGGAGCCGTTACAGATCGAAAAGACAGAAGAGAAGAACCCAAAGGTGGTGATTACGCGACTGCGCAGCAAGGTCTTCATGCACTACTACCGCATGAAGTACAAAGTTGGATATGAGTGCGCGATATGCACCAAGAGTTTTGCGCGCAAGCAAGAACTGACGATCCACAGACAGACGGCGCATTATAAACCGAGACCGTTCCAGTGCACCGATTGCGACAAGTCGTTCTGCGACAAGACGCACCTGTGGCGTCACAACAAACAGATACACAAGAATAACATGCCGGTGTTCTGCGAGGATTGCGGATCCCGCTTCGCCGACCACCGCGATCTGAAGATACACATCAAGGAGGAGCATAAAAAGCAGGCGACGTACAGCTGTCGTTTCTGCATCGAGGAGTTTTCCGTTTACAGCGGTCTCACGAAGCACATACGACAGTACCACAAGAGCACTCTGGCGAGGAAGTGCGAACACTGCGGAAAGATCCTCTTCGGGAAATCCTCTCTCGAAGCGCACATCAAATACGTTCACCACAAAGTGAAAGTTATATGCGCATTGTGCAATAAGCCGCTGCGATCGAAATCGAATCTTTTGaatcatttaaattctgtgCATAAGCGCGGCGAGACGCTCGAATGCATGCGCTGCTTCAAAAACTTCTCATCGTCGAATTCGTTAAAGTCGCACGTTTTAGCCGTGCACTTCGGTGTAAAGAAGCATTTGTGTCACACGTGCGATGTGGCGTTTTCGAAACGCGACCACTTAGATCGACACGTCGAGACGAAACACCCGGCGACGGTGCACGGGCGTTCGCTGCGTTTCGCCTGCAACGTCTGCAACAGCGCGTTCCCCAAAAAGCGAGCGTTGCGCGATCACGTCGTATTCGCGCATCTCAAAAGGTATCGGTACGTGTGTCGCTACTGCAAACGCCCGATTTCGAGCGCGGCGAACCTGGAAACGCACATCGATGCGTTCCACGTCGCAAAGAAGATGTTCCCGTCCGAGAAACCGCCCAAGCAGAAACCGAGCCCGAAACCGCGCAAACAGCGCAATTTCGTCCCGAAACCGGATTCGGCCGAATGTCCGCACTGCTTGCGCCCGTATTCATCGCAGTGCAACCTCAAAACGCACGTCCTTTCGATCCATTTCCGGATACGACGCTACTTATGCCGACTGTGCGATATCGTCTTCGCGAAACACGAACAGCTGGAACGTCACTGCAAGACCGACCATTACGAAAACGTCCACGAACGCCATTTAACTTTCGGATGCGACGTTTGCAACGGCGCTTACGCCTCCAAAAAAGCACTCATCGATCACGTGCGCTTCGCCCACCTCTCGCAGAACGACTACACCTGCCGCTTCTGCAAACGGAGCGTGCTCAACGCCAAGAGCCTCCGGAGGCACGTCCTCGAAACGCACGACAGCCACAGCAGTTTCCCCTGCCTGAAATGCCTGAGGAGCTTCGAAAGCGAAGAATTGTTCGACGGCCACAAGGACACGTGCGTGTCGCACGTTTACGACGCTCGAAAACCAGACGAAGGCTCGCCGTAA
- Protein Sequence
- MSHMSEFMGFGEEPPMMYNAEVQYKNTDGGFVIQDGINVQSHFYDIFEEFIREDPCSNGYHHNHSIFDSIKKEFAPPPPVPEASPSTPIKHEVVPVAPVPVNHIHKSLEEPLQIEKTEEKNPKVVITRLRSKVFMHYYRMKYKVGYECAICTKSFARKQELTIHRQTAHYKPRPFQCTDCDKSFCDKTHLWRHNKQIHKNNMPVFCEDCGSRFADHRDLKIHIKEEHKKQATYSCRFCIEEFSVYSGLTKHIRQYHKSTLARKCEHCGKILFGKSSLEAHIKYVHHKVKVICALCNKPLRSKSNLLNHLNSVHKRGETLECMRCFKNFSSSNSLKSHVLAVHFGVKKHLCHTCDVAFSKRDHLDRHVETKHPATVHGRSLRFACNVCNSAFPKKRALRDHVVFAHLKRYRYVCRYCKRPISSAANLETHIDAFHVAKKMFPSEKPPKQKPSPKPRKQRNFVPKPDSAECPHCLRPYSSQCNLKTHVLSIHFRIRRYLCRLCDIVFAKHEQLERHCKTDHYENVHERHLTFGCDVCNGAYASKKALIDHVRFAHLSQNDYTCRFCKRSVLNAKSLRRHVLETHDSHSSFPCLKCLRSFESEELFDGHKDTCVSHVYDARKPDEGSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -